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Microbial communities colonising plastics during transition from the wastewater treatment plant to marine waters.
Published in:
Environmental Microbiome, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s40793-024-00569-2
By:
- Tulloch, Constance L.;
- Bargiela, Rafael;
- Williams, Gwion B.;
- Chernikova, Tatyana N.;
- Cotterell, Benjamin M.;
- Wellington, Elizabeth M. H.;
- Christie-Oleza, Joseph;
- Thomas, David N.;
- Jones, Davey L.;
- Golyshin, Peter N.
Publication type:
Article
Enzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomes.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36610-0
By:
- Marasco, Ramona;
- Fusi, Marco;
- Coscolín, Cristina;
- Barozzi, Alan;
- Almendral, David;
- Bargiela, Rafael;
- Nutschel, Christina Gohlke neé;
- Pfleger, Christopher;
- Dittrich, Jonas;
- Gohlke, Holger;
- Matesanz, Ruth;
- Sanchez-Carrillo, Sergio;
- Mapelli, Francesca;
- Chernikova, Tatyana N.;
- Golyshin, Peter N.;
- Ferrer, Manuel;
- Daffonchio, Daniele
Publication type:
Article
Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the α/β hydrolase family.
Published in:
Biochemical Journal, 2013, v. 454, n. 1, p. 157, doi. 10.1042/BJ20130552
By:
- ALCAIDE, María;
- TORNÉS, Jesús;
- STOGIOS, Peter J.;
- Xiaohui XU;
- GERTLER, Christoph;
- DI LEO, Rosa;
- BARGIELA, Rafael;
- LAFRAYA, Álvaro;
- GUAZZARONI, María-Eugenia;
- LÓPEZ-CORTÉS, Nieves;
- CHERNIKOVA, Tatyana N.;
- GOLYSHINA, Olga V.;
- NECHITAYLO, Taras Y.;
- PLUMEIER, Iris;
- PIEPER, Dietmar H.;
- YAKIMOV, Michail M.;
- SAVCHENKO, Alexei;
- GOLYSHIN, Peter N.;
- FERRER, Manuel
Publication type:
Article
Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica.
Published in:
Biochemical Journal, 2012, v. 445, n. 2, p. 193, doi. 10.1042/BJ20112113
By:
- LEMAK, Sofia;
- TCHIGVINTSEV, Anatoli;
- PETIT, Pierre;
- FLICK, Robert;
- SINGER, Alexander U.;
- BROWN, Greg;
- EVDOKIMOVA, Elena;
- EGOROVA, Olga;
- GONZALEZ, Claudio F.;
- CHERNIKOVA, Tatyana N.;
- YAKIMOV, Michail M.;
- KUBE, Michael;
- REINHARDT, Richard;
- GOLYSHIN, Peter N.;
- SAVCHENKO, Alexei;
- YAKUNIN, Alexander F.
Publication type:
Article
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.
Published in:
Nature Biotechnology, 2006, v. 24, n. 8, p. 997, doi. 10.1038/nbt1232
By:
- Schneiker, Susanne;
- dos Santos, Vítor A. P. Martins;
- Bartels, Daniela;
- Bekel, Thomas;
- Brecht, Martina;
- Buhrmester, Jens;
- Chernikova, Tatyana N.;
- Denaro, Renata;
- Ferrer, Manuel;
- Gertler, Christoph;
- Goesmann, Alexander;
- Golyshina, Olga V.;
- Kaminski, Filip;
- Khachane, Amit N.;
- Siegmund Lang;
- Linke, Burkhard;
- McHardy, Alice C.;
- Meyer, Folker;
- Nechitaylo, Taras;
- Pühler, Alfred
Publication type:
Article
Chaperonins govern growth of Escherichia coli at low temperatures.
Published in:
2003
By:
- Ferrer, Manuel;
- Chernikova, Tatyana N.;
- Yakimov, Michail M.;
- Golyshin, Peter N.;
- Timmis, Kenneth N.
Publication type:
Letter
Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families.
Published in:
Scientific Reports, 2017, p. 44103, doi. 10.1038/srep44103
By:
- Popovic, Ana;
- Hai, Tran;
- Tchigvintsev, Anatoly;
- Hajighasemi, Mahbod;
- Nocek, Boguslaw;
- Khusnutdinova, Anna N.;
- Brown, Greg;
- Glinos, Julia;
- Flick, Robert;
- Skarina, Tatiana;
- Chernikova, Tatyana N.;
- Yim, Veronica;
- Brüls, Thomas;
- Paslier, Denis Le;
- Yakimov, Michail M.;
- Joachimiak, Andrzej;
- Ferrer, Manuel;
- Golyshina, Olga V.;
- Savchenko, Alexei;
- Golyshin, Peter N.
Publication type:
Article
Functional consequences of single:double ring transitions in chaperonins: life in the cold.
Published in:
Molecular Microbiology, 2004, v. 53, n. 1, p. 167, doi. 10.1111/j.1365-2958.2004.04077.x
By:
- Ferrer, Manuel;
- Lünsdorf, Heinrich;
- Chernikova, Tatyana N.;
- Yakimov, Michail;
- Timmis, Kenneth N.;
- Golyshin, Peter N.
Publication type:
Article
Functional Metagenomics Unveils a Multifunctional Glycosyl Hydrolase from the Family 43 Catalysing the Breakdown of Plant Polymers in the Calf Rumen.
Published in:
PLoS ONE, 2012, v. 7, n. 6, p. e38134, doi. 10.1371/journal.pone.0038134
By:
- Ferrer, Manuel;
- Ghazi, Azam;
- Beloqui, Ana;
- Vieites, José María;
- López-Cortés, Nieves;
- Marín- Navarro, Julia;
- Nechitaylo, Taras Y.;
- Guazzaroni, María-Eugenia;
- Polaina, Julio;
- Waliczek, Agnes;
- Chernikova, Tatyana N.;
- Reva, Oleg N.;
- Golyshina, Olga V.;
- Golyshin, Peter N.
Publication type:
Article
Biochemical and structural features of a novel cyclodextrinase from cow rumen metagenome.
Published in:
Biotechnology Journal, 2007, v. 2, n. 2, p. 207, doi. 10.1002/biot.200600183
By:
- Ferrer, Manuel;
- Beloqui, Ana;
- Golyshina, Olga V.;
- Plou, Francisco J.;
- Neef, Alexander;
- Chernikova, Tatyana N.;
- Fernández-Arrojo, Lucia;
- Ghazi, Iraj;
- Ballesteros, Antonio;
- Elborough, Kieran;
- Timmis, Kenneth N.;
- Golyshin, Peter N.
Publication type:
Article
Metaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation.
Published in:
Proteomics, 2015, v. 15, n. 20, p. 3508, doi. 10.1002/pmic.201400614
By:
- Bargiela, Rafael;
- Herbst, Florian‐Alexander;
- Martínez‐Martínez, Mónica;
- Seifert, Jana;
- Rojo, David;
- Cappello, Simone;
- Genovese, María;
- Crisafi, Francesca;
- Denaro, Renata;
- Chernikova, Tatyana N.;
- Barbas, Coral;
- Bergen, Martin;
- Yakimov, Michail M.;
- Ferrer, Manuel;
- Golyshin, Peter N.
Publication type:
Article
Novel Hybrid Esterase-Haloacid Dehalogenase Enzyme.
Published in:
ChemBioChem, 2010, v. 11, n. 14, p. 1975, doi. 10.1002/cbic.201000258
By:
- Beloqui, Ana;
- Polaina, Julio;
- Vieites, José María;
- Reyes-Duarte, Dolores;
- Torres, Rodrigo;
- Golyshina, Olga V.;
- Chernikova, Tatyana N.;
- Waliczek, Agnes;
- Aharoni, Amir;
- Yakimov, Michail M.;
- Timmis, Kenneth N.;
- Golyshin, Peter N.;
- Ferrer, Manuel
Publication type:
Article
Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats.
Published in:
Environmental Microbiology, 2015, v. 17, n. 2, p. 332, doi. 10.1111/1462-2920.12660
By:
- Alcaide, María;
- Stogios, Peter J.;
- Lafraya, Álvaro;
- Tchigvintsev, Anatoli;
- Flick, Robert;
- Bargiela, Rafael;
- Chernikova, Tatyana N.;
- Reva, Oleg N.;
- Hai, Tran;
- Leggewie, Christian C.;
- Katzke, Nadine;
- La Cono, Violetta;
- Matesanz, Ruth;
- Jebbar, Mohamed;
- Jaeger, Karl‐Erich;
- Yakimov, Michail M.;
- Yakunin, Alexander F.;
- Golyshin, Peter N.;
- Golyshina, Olga V.;
- Savchenko, Alexei
Publication type:
Article
Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study.
Published in:
Environmental Microbiology, 2012, v. 14, n. 1, p. 268, doi. 10.1111/j.1462-2920.2011.02634.x
By:
- Ferrer, Manuel;
- Werner, Johannes;
- Chernikova, Tatyana N.;
- Bargiela, Rafael;
- Fernández, Lucía;
- La Cono, Violetta;
- Waldmann, Jost;
- Teeling, Hanno;
- Golyshina, Olga V.;
- Glöckner, Frank Oliver;
- Yakimov, Michail M.;
- Golyshin, Peter N.
Publication type:
Article
Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora.
Published in:
Environmental Microbiology, 2005, v. 7, n. 12, p. 1996, doi. 10.1111/j.1462-2920.2005.00920.x
By:
- Ferrer, Manuel;
- Golyshina, Olga V.;
- Chernikova, Tatyana N.;
- Khachane, Amit N.;
- Reyes-Duarte, Dolores;
- Martins Dos Santos, Vitor A. P.;
- Strompl, Carsten;
- Elborough, Kieran;
- Jarvis, Graeme;
- Neef, Alexander;
- Yakimov, Michail M.;
- Timmis, Kenneth N.;
- Golyshin, Peter N.
Publication type:
Article
Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons.
Published in:
Environmental Microbiology, 2005, v. 7, n. 9, p. 1426, doi. 10.1111/j.1462-5822.2005.00829.x
By:
- Yakimov, Michail M.;
- Denaro, Renata;
- Genovese, Maria;
- Cappello, Simone;
- D'Auria, Giuseppe;
- Chernikova, Tatyana N.;
- Timmis, Kenneth N.;
- Golyshin, Peter N.;
- Giluliano, Laura
Publication type:
Article
Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy).
Published in:
Environmental Microbiology, 2002, v. 4, n. 5, p. 249, doi. 10.1046/j.1462-2920.2002.00293.x
By:
- Yakimov, Michail M;
- Giuliano, Laura;
- Crisafi, Ermanno;
- Chernikova, Tatyana N;
- Timmis, Kenneth N;
- Golyshin, Peter N
Publication type:
Article
Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Published in:
Nature Communications, 2013, v. 4, n. 7, p. 2156, doi. 10.1038/ncomms3156
By:
- Kube, Michael;
- Chernikova, Tatyana N.;
- Al-Ramahi, Yamal;
- Beloqui, Ana;
- Lopez-Cortez, Nieves;
- Guazzaroni, María-Eugenia;
- Heipieper, Hermann J.;
- Klages, Sven;
- Kotsyurbenko, Oleg R.;
- Langer, Ines;
- Nechitaylo, Taras Y.;
- Lünsdorf, Heinrich;
- Fernández, Marisol;
- Juárez, Silvia;
- Ciordia, Sergio;
- Singer, Alexander;
- Kagan, Olga;
- Egorova, Olga;
- Alain Petit, Pierre;
- Stogios, Peter
Publication type:
Article
Microbial ß-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail.
Published in:
Biotechnology for Biofuels, 2012, v. 5, n. 1, p. 73, doi. 10.1186/1754-6834-5-73
By:
- Del Pozo, Mercedes V.;
- Fern�ndez-Arrojo, Luc�a;
- Gil-Mart�nez, Jorge;
- Montesinos, Alejandro;
- Chernikova, Tatyana N.;
- Nechitaylo, Taras Y.;
- Waliszek, Agnes;
- Tortajada, Marta;
- Rojas, Antonia;
- Huws, Sharon A.;
- Golyshina, Olga V.;
- Newbold, Charles J.;
- Polaina, Julio;
- Ferrer, Manuel;
- Golyshin, Peter N.
Publication type:
Article
Bacterial population and biodegradation potential in chronically crude oil-contaminated marine sediments are strongly linked to temperature.
Published in:
Scientific Reports, 2015, p. 11651, doi. 10.1038/srep11651
By:
- Bargiela, Rafael;
- Mapelli, Francesca;
- Rojo, David;
- Chouaia, Bessem;
- Tornés, Jesús;
- Borin, Sara;
- Richter, Michael;
- Del Pozo, Mercedes V.;
- Cappello, Simone;
- Gertler, Christoph;
- Genovese, María;
- Denaro, Renata;
- Martínez-Martínez, Mónica;
- Fodelianakis, Stilianos;
- Amer, Ranya A.;
- Bigazzi, David;
- Han, Xifang;
- Chen, Jianwei;
- Chernikova, Tatyana N.;
- Golyshina, Olga V.
Publication type:
Article
Hydrocarbon-Degrading Bacteria Alcanivorax and Marinobacter Associated With Microalgae Pavlova lutheri and Nannochloropsis oculata.
Published in:
Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.572931
By:
- Chernikova, Tatyana N.;
- Bargiela, Rafael;
- Toshchakov, Stepan V.;
- Shivaraman, Vignesh;
- Lunev, Evgenii A.;
- Yakimov, Michail M.;
- Thomas, David N.;
- Golyshin, Peter N.
Publication type:
Article
Prevalence of integrons in multidrug-resistant Escherichia coli isolates from waters and vegetables in Nsukka and Enugu, Southeast Nigeria.
Published in:
Environmental Science & Pollution Research, 2022, v. 29, n. 40, p. 60945, doi. 10.1007/s11356-022-20254-6
By:
- Chigor, Chinyere B.;
- Ibangha, Ini-Abasi I.;
- Nweze, Nkechinyere O.;
- Onuora, Valentino C.;
- Ozochi, Chizoba A.;
- Titilawo, Yinka;
- Enebe, Matthew C.;
- Chernikova, Tatyana N.;
- Golyshin, Peter N.;
- Chigor, Vincent N.
Publication type:
Article

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