Found: 31
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SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.
- Published in:
- BMC Systems Biology, 2013, v. 7, n. 1, p. 3, doi. 10.1186/1752-0509-7-135
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- Publication type:
- Article
Modeling ERBB receptor-regulated G1/S transition to find novel targets for de novo trastuzumab resistance.
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- BMC Systems Biology, 2009, v. 3, p. 1, doi. 10.1186/1752-0509-3-1
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- Publication type:
- Article
In Silico Logical Modelling to Uncover Cooperative Interactions in Cancer.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 9, p. 4897, doi. 10.3390/ijms22094897
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- Article
Dynamical Analysis of the Regulatory Network Defining the Dorsal-Ventral Boundary of the Drosophila Wing Imaginal Disc.
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- Genetics, 2006, v. 174, n. 3, p. 1625, doi. 10.1534/genetics.106.061218
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- Article
Computational modelling in health and disease: highlights of the 6th annual SysMod meeting.
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- Bioinformatics, 2022, v. 38, n. 21, p. 4990, doi. 10.1093/bioinformatics/btac609
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- Publication type:
- Article
SysMod: the ISCB community for data-driven computational modelling and multi-scale analysis of biological systems.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3702, doi. 10.1093/bioinformatics/btab229
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- Publication type:
- Article
The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST).
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- Bioinformatics, 2020, v. 36, n. 24, p. 5712, doi. 10.1093/bioinformatics/btaa622
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- Article
Petri net modelling of biological networks.
- Published in:
- Briefings in Bioinformatics, 2007, v. 8, n. 4, p. 210, doi. 10.1093/bib/bbm029
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- Publication type:
- Article
Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE).
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1285, doi. 10.4056/sigs.5279417
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- Publication type:
- Article
Bringing Dicynodonts Back to Life: Paleobiology and Anatomy of a New Emydopoid Genus from the Upper Permian of Mozambique.
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- PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0080974
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- Publication type:
- Article
Majority Rules with Random Tie-Breaking in Boolean Gene Regulatory Networks.
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- PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069626
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- Publication type:
- Article
Logical Modelling of Regulatory Networks, Methods and Applications.
- Published in:
- 2013
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- Publication type:
- Editorial
Logical Modeling and Dynamical Analysis of Cellular Networks.
- Published in:
- Frontiers in Genetics, 2016, p. 1, doi. 10.3389/fgene.2016.00094
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- Publication type:
- Article
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2.
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- Journal of Integrative Bioinformatics, 2019, v. 16, n. 2, p. 1, doi. 10.1515/jib-2019-0021
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- Publication type:
- Article
Primary sex determination of placental mammals: a modelling study uncovers dynamical developmental constraints in the formation of Sertoli and granulosa cells.
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- BMC Systems Biology, 2016, v. 10, p. 1, doi. 10.1186/s12918-016-0282-3
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- Publication type:
- Article
Logical modelling and analysis of the budding yeast cell cycle.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 1, doi. 10.1186/1471-2105-8-S8-P1
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- Publication type:
- Article
SBML Level 3: an extensible format for the exchange and reuse of biological models.
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- Molecular Systems Biology, 2020, v. 16, n. 8, p. 1, doi. 10.15252/msb.20199110
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- Publication type:
- Article
A Discrete Model of <i>Drosophila</i> Eggshell Patterning Reveals Cell-Autonomous and Juxtacrine Effects.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 3, p. 1, doi. 10.1371/journal.pcbi.1003527
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- Publication type:
- Article
Diversity and Plasticity of Th Cell Types Predicted from Regulatory Network Modelling.
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- PLoS Computational Biology, 2010, v. 6, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000912
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- Publication type:
- Article
Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology.
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- Briefings in Bioinformatics, 2022, v. 23, n. 4, p. 1, doi. 10.1093/bib/bbac212
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- Publication type:
- Article
Setting the basis of best practices and standards for curation and annotation of logical models in biology—highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop.
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- Briefings in Bioinformatics, 2021, v. 22, n. 2, p. 1848, doi. 10.1093/bib/bbaa046
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- Publication type:
- Article
Assessing regulatory features of the current transcriptional network of Saccharomyces cerevisiae.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-74043-7
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- Publication type:
- Article
YEASTRACT+: a portal for the exploitation of global transcription regulation and metabolic model data in yeast biotechnology and pathogenesis.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. D1, p. D785, doi. 10.1093/nar/gkac1041
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- Publication type:
- Article
Correction to: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE).
- Published in:
- 2018
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- Publication type:
- Correction Notice
Modelling the onset of senescence at the G1/S cell cycle checkpoint.
- Published in:
- BMC Genomics, 2014, v. 15, p. 1, doi. 10.1186/1471-2164-15-S7-S7
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- Publication type:
- Article
Cooperative development of logical modelling standards and tools with CoLoMoTo.
- Published in:
- Bioinformatics, 2015, v. 31, n. 7, p. 1154, doi. 10.1093/bioinformatics/btv013
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- Publication type:
- Article
Composition and abstraction of logical regulatory modules: application to multicellular systems.
- Published in:
- Bioinformatics, 2013, v. 29, n. 6, p. 749, doi. 10.1093/bioinformatics/btt033
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- Publication type:
- Article
Logical modelling of the role of the Hh pathway in the patterning of the Drosophila wing disc.
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- Bioinformatics, 2008, v. 24, n. 16, p. i234, doi. 10.1093/bioinformatics/btn266
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- Publication type:
- Article
Estimating Attractor Reachability in Asynchronous Logical Models.
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- Frontiers in Physiology, 2018, p. N.PAG, doi. 10.3389/fphys.2018.01161
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- Publication type:
- Article
Logical Modeling and Analysis of Cellular Regulatory Networks With GINsim 3.0.
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- Frontiers in Physiology, 2018, p. N.PAG, doi. 10.3389/fphys.2018.00646
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- Publication type:
- Article
The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks.
- Published in:
- Frontiers in Physiology, 2018, p. N.PAG, doi. 10.3389/fphys.2018.00680
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- Article