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Gene, pathway and network frameworks to identify epistatic interactions of single nucleotide polymorphisms derived from GWAS data.
- Published in:
- BMC Systems Biology, 2012, v. 6, n. Suppl 3, p. 1, doi. 10.1186/1752-0509-6-S3-S15
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- Publication type:
- Article
Gene interaction enrichment and network analysis to identify dysregulated pathways and their interactions in complex diseases.
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- BMC Systems Biology, 2012, v. 6, n. 1, p. 65, doi. 10.1186/1752-0509-6-65
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- Publication type:
- Article
MAGNET: MicroArray Gene expression and Network Evaluation Toolkit.
- Published in:
- Nucleic Acids Research, 2012, v. 40, p. W152, doi. 10.1093/nar/gks526
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- Publication type:
- Article
Interplay of transcriptional signaling by progesterone, cyclic AMP, and inflammation in myometrial cells: implications for the control of human parturition.
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- Molecular Human Reproduction, 2019, v. 25, n. 7, p. 408, doi. 10.1093/molehr/gaz028
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- Publication type:
- Article
Human alveolar macrophages display marked hypo-responsiveness to IFN-γ in both proteomic and gene expression analysis.
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- PLoS ONE, 2024, v. 19, n. 2, p. 1, doi. 10.1371/journal.pone.0295312
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- Article
Structural genomics: beyond the Human Genome Project.
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- Nature Genetics, 1999, v. 23, n. 2, p. 151, doi. 10.1038/13783
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- Publication type:
- Article
Functional characterization of co-phosphorylation networks.
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- Bioinformatics, 2022, v. 38, n. 15, p. 3785, doi. 10.1093/bioinformatics/btac406
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- Publication type:
- Article
Co-phosphorylation networks reveal subtype-specific signaling modules in breast cancer.
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- Bioinformatics, 2021, v. 37, n. 2, p. 221, doi. 10.1093/bioinformatics/btaa678
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- Publication type:
- Article
Network biology methods integrating biological data for translational science.
- Published in:
- Briefings in Bioinformatics, 2012, v. 13, n. 4, p. 446, doi. 10.1093/bib/bbr075
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- Publication type:
- Article
Structural Basis for the Oligomerization-State Switch from a Dimer to a Trimer of an Engineered Cortexillin-1 Coiled-Coil Variant
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- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063370
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- Publication type:
- Article
Proteomic Signatures of Human Oral Epithelial Cells in HIV-Infected Subjects.
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- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027816
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- Publication type:
- Article
Prediction and Testing of Biological Networks Underlying Intestinal Cancer.
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- PLoS ONE, 2010, v. 5, n. 9, p. 1, doi. 10.1371/journal.pone.0012497
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- Publication type:
- Article
Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 Å resolution.
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- Proteins, 2010, v. 78, n. 14, p. 3056, doi. 10.1002/prot.22829
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- Publication type:
- Article
During Hepatitis C Virus (HCV) Infection and HCV-HIV Coinfection, an Elevated Plasma Level of Autotaxin Is Associated With Lysophosphatidic Acid and Markers of Immune Activation That Normalize During Interferon-Free HCV Therapy.
- Published in:
- 2016
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- Publication type:
- journal article
Structurally distinct external solvent-exposed domains drive replication of major human prions.
- Published in:
- PLoS Pathogens, 2021, v. 17, n. 6, p. 1, doi. 10.1371/journal.ppat.1009642
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- Publication type:
- Article
Proteomic profiling of the hypothalamus in two mouse models of narcolepsy.
- Published in:
- Proteomics, 2017, v. 17, n. 13/14, p. n/a, doi. 10.1002/pmic.201600478
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- Publication type:
- Article
Proteomic and bioinformatics profile of paired human alveolar macrophages and peripheral blood monocytes.
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- Proteomics, 2015, v. 15, n. 22, p. 3797, doi. 10.1002/pmic.201400496
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- Publication type:
- Article
Phosphorylation of HEXIM1 at Tyr271 and Tyr274 Promotes Release of P-TEFb from the 7SK snRNP Complex and Enhances Proviral HIV Gene Expression.
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- Proteomics, 2015, v. 15, n. 12, p. 2078, doi. 10.1002/pmic.201500038
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- Publication type:
- Article
Pharmacologic intervention targeting glycolytic-related pathways protects against retinal injury due to ischemia and reperfusion.
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- Proteomics, 2009, v. 9, n. 7, p. 1869, doi. 10.1002/pmic.200701071
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- Publication type:
- Article
Automated technologies and novel techniques to accelerate protein crystallography for structural genomics.
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- Proteomics, 2008, v. 8, n. 4, p. 612, doi. 10.1002/pmic.200700687
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- Publication type:
- Article
Training the next generation of translational scientists: The Case Western Reserve University Translational Fellows Program.
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- Journal of Clinical & Translational Science, 2022, v. 6, n. 1, p. 1, doi. 10.1017/cts.2022.390
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- Publication type:
- Article
Optimizing biomedical discoveries as an engine of culture change in an academic medical center.
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- Journal of Clinical & Translational Science, 2022, v. 6, n. 1, p. 1, doi. 10.1017/cts.2021.888
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- Publication type:
- Article
A dynamical systems model of progesterone receptor interactions with inflammation in human parturition.
- Published in:
- BMC Systems Biology, 2016, v. 107, p. 1, doi. 10.1186/s12918-016-0320-1
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- Publication type:
- Article
Pairwise protein expression classifier for candidate biomarker discovery for early detection of human disease prognosis.
- Published in:
- BMC Bioinformatics, 2012, v. 13, n. 1, p. 191, doi. 10.1186/1471-2105-13-191
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- Publication type:
- Article
PETALS: Proteomic Evaluation and Topological Analysis of a mutated Locus' Signaling.
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- BMC Bioinformatics, 2010, v. 11, p. 596, doi. 10.1186/1471-2105-11-596
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- Publication type:
- Article
Corrigendum: Myometrial Transcriptional Signatures of Human Parturition.
- Published in:
- 2019
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- Publication type:
- Correction Notice
Myometrial Transcriptional Signatures of Human Parturition.
- Published in:
- Frontiers in Genetics, 2019, p. N.PAG, doi. 10.3389/fgene.2019.00185
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- Publication type:
- Article
Semi-automated, single-band peak-fitting analysis of hydroxyl radical nucleic acid footprint autoradiograms for the quantitative analysis of transitions.
- Published in:
- Nucleic Acids Research, 2004, v. 32, n. 15, p. e119, doi. 10.1093/nar/gnh117
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- Publication type:
- Article
Global phosphoproteomics of CCR5-tropic HIV-1 signaling reveals reprogramming of cellular protein production pathways and identifies p70-S6K1 and MK2 as HIV-responsive kinases required for optimal infection of CD4+ T cells.
- Published in:
- Retrovirology, 2018, v. 15, n. 1, p. N.PAG, doi. 10.1186/s12977-018-0423-4
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- Publication type:
- Article
Network Signatures of Survival in Glioblastoma Multiforme.
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- PLoS Computational Biology, 2013, v. 9, n. 9, p. 1, doi. 10.1371/journal.pcbi.1003237
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- Publication type:
- Article
An Integrative -omics Approach to Identify Functional Sub-Networks in Human Colorectal Cancer.
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- PLoS Computational Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1371/journal.pcbi.1000639
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- Publication type:
- Article
Proteomics and Network Analyses Reveal Inhibition of Akt-mTOR Signaling in CD4<sup>+</sup> T Cells by Mycobacterium tuberculosis Mannose-Capped Lipoarabinomannan.
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- Proteomics, 2017, v. 17, n. 22, p. n/a, doi. 10.1002/pmic.201700233
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- Publication type:
- Article
Phosphoproteomics Profiling of Nonsmall Cell Lung Cancer Cells Treated with a Novel Phosphatase Activator.
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- Proteomics, 2017, v. 17, n. 22, p. n/a, doi. 10.1002/pmic.201700214
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- Publication type:
- Article
Structural basis of ligand interaction with atypical chemokine receptor 3.
- Published in:
- Nature Communications, 2017, v. 8, n. 1, p. 14135, doi. 10.1038/ncomms14135
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- Publication type:
- Article
Electrospray-assisted modification of proteins: a radical probe of protein structure.
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- Rapid Communications in Mass Spectrometry: RCM, 1999, v. 13, n. 23, p. 2352, doi. 10.1002/(SICI)1097-0231(19991215)13:23<2352::AID-RCM798>3.0.CO;2-X
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- Publication type:
- Article
Phosphorylation of CDK9 at Ser175 Enhances HIV Transcription and Is a Marker of Activated P-TEFb in CD4<sup>+</sup> T Lymphocytes
- Published in:
- PLoS Pathogens, 2013, v. 9, n. 5, p. 1, doi. 10.1371/journal.ppat.1003338
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- Publication type:
- Article
Finding lost genes in GWAS via integrative--omics analysis reveals novel sub-networks associated with preterm birth.
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- Human Molecular Genetics, 2016, v. 25, n. 23, p. 5254, doi. 10.1093/hmg/ddw325
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- Publication type:
- Article
Stability and cooperativity of individual tertiary contacts in RNA revealed through chemical denaturation.
- Published in:
- Nature Structural Biology, 2000, v. 7, n. 5, p. 371
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- Publication type:
- Article
Low frequency vibrations of amino acid homopolymers observed by synchrotron far-ir absorption spectroscopy: Excited state effects dominate the temperature dependence of the spectra.
- Published in:
- Biopolymers, 1999, v. 49, n. 7, p. 591, doi. 10.1002/(SICI)1097-0282(199906)49:7<591::AID-BIP5>3.0.CO;2-Q
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- Publication type:
- Article
Visualizing the kinetic power stroke that drives proton-coupled zinc(ii) transport.
- Published in:
- Nature, 2014, v. 512, n. 7512, p. 101, doi. 10.1038/nature13382
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- Publication type:
- Article
Multidomain architecture of estrogen receptor reveals interfacial cross-talk between its DNA-binding and ligand-binding domains.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-06034-2
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- Publication type:
- Article
Identifying stage-specific protein subnetworks for colorectal cancer.
- Published in:
- BMC Proceedings, 2012, v. 6, n. Supp 7, p. 1, doi. 10.1186/1753-6561-6-S7-S1
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- Publication type:
- Article
Identifying stage-specific protein subnetworks for colorectal cancer.
- Published in:
- BMC Proceedings, 2012, v. 6, n. Suppl 7, p. 1, doi. 10.1186/1753-6561-6-S7-S1
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- Publication type:
- Article
Monovalent cations mediate formation of native tertiary structure of the Tetrahymena thermophila ribozyme.
- Published in:
- Nature Structural Biology, 2002, v. 9, n. 12, p. 928, doi. 10.1038/nsb871
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- Publication type:
- Article
Proteomics, bioinformatics and targeted gene expression analysis reveals up-regulation of cochlin and identifies other potential biomarkers in the mouse model for deafness in usher syndrome type 1F.
- Published in:
- Human Molecular Genetics, 2010, v. 19, n. 8, p. 1515, doi. 10.1093/hmg/ddq025
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- Publication type:
- Article
Regulation of endothelial hemoglobin alpha expression by Kruppel-like factors.
- Published in:
- Vascular Medicine, 2017, v. 22, n. 5, p. 363, doi. 10.1177/1358863X17722211
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- Publication type:
- Article
New high‐throughput endstation to accelerate the experimental optimization pipeline for synchrotron X‐ray footprinting.
- Published in:
- Journal of Synchrotron Radiation, 2021, v. 28, n. 5, p. 1321, doi. 10.1107/S1600577521005026
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- Publication type:
- Article
The XFP (17‐BM) beamline for X‐ray footprinting at NSLS‐II.
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- Journal of Synchrotron Radiation, 2019, v. 26, n. 4, p. 1388, doi. 10.1107/S1600577519003576
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- Publication type:
- Article
Development of a microsecond X-ray protein footprinting facility at the Advanced Light Source.
- Published in:
- Journal of Synchrotron Radiation, 2014, v. 21, n. 4, p. 690, doi. 10.1107/S1600577514007000
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- Publication type:
- Article
Synchrotron X-ray footprinting on tour.
- Published in:
- Journal of Synchrotron Radiation, 2014, v. 21, n. 1, p. 24, doi. 10.1107/S1600577513024715
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- Publication type:
- Article