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Defined High Molar Mass Poly(2‐Oxazoline)s.
Published in:
Angewandte Chemie, 2018, v. 130, n. 47, p. 15626, doi. 10.1002/ange.201807796
By:
- Monnery, Bryn D.;
- Jerca, Valentin V.;
- Sedlacek, Ondrej;
- Verbraeken, Bart;
- Cavill, Rachel;
- Hoogenboom, Richard
Publication type:
Article
Defined High Molar Mass Poly(2‐Oxazoline)s.
Published in:
Angewandte Chemie International Edition, 2018, v. 57, n. 47, p. 15400, doi. 10.1002/anie.201807796
By:
- Monnery, Bryn D.;
- Jerca, Valentin V.;
- Sedlacek, Ondrej;
- Verbraeken, Bart;
- Cavill, Rachel;
- Hoogenboom, Richard
Publication type:
Article
Blood‐based multivariate methylation risk score for cognitive impairment and dementia.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, n. 10, p. 6682, doi. 10.1002/alz.14061
By:
- Koetsier, Jarno;
- Cavill, Rachel;
- Reijnders, Rick;
- Harvey, Joshua;
- Homann, Jan;
- Kouhsar, Morteza;
- Deckers, Kay;
- Köhler, Sebastian;
- Eijssen, Lars M. T.;
- van den Hove, Daniel L. A.;
- Demuth, Ilja;
- Düzel, Sandra;
- Smith, Rebecca G.;
- Smith, Adam R.;
- Burrage, Joe;
- Walker, Emma M.;
- Shireby, Gemma;
- Hannon, Eilis;
- Dempster, Emma;
- Frayling, Tim
Publication type:
Article
Multiomics‐based prediction of trajectories of global cognitive functioning in the ADNI cohort.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.077394
By:
- Laroche, Valentin;
- Reijnders, Rick A;
- Harvey, Joshua;
- Jansen, Willemijn J.;
- Eijssen, Lars M.T.;
- Cavill, Rachel;
- Lunnon, Katie;
- van den Hove, Daniel L.A.;
- Pishva, Ehsan
Publication type:
Article
Methylomic‐based molecular subtyping of late onset Alzheimer's Disease.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.077731
By:
- Laroche, Valentin;
- Reijnders, Rick A;
- Smith, Adam R.;
- Eijssen, Lars M.T.;
- Cavill, Rachel;
- Hove, Daniel L.A.;
- Lunnon, Katie;
- Pishva, Ehsan
Publication type:
Article
Methylomic‐based molecular subtyping of late onset Alzheimer's Disease.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.077731
By:
- Laroche, Valentin;
- Reijnders, Rick A;
- Smith, Adam R.;
- Eijssen, Lars M.T.;
- Cavill, Rachel;
- Hove, Daniel L.A.;
- Lunnon, Katie;
- Pishva, Ehsan
Publication type:
Article
Machine learning‐based prediction of cognitive outcomes in de novo Parkinson's disease.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2022, v. 18, n. 5, p. 1, doi. 10.1002/alz.067067
By:
- Harvey, Joshua;
- Reijnders, Rick A;
- Cavill, Rachel;
- Duits, Annelien;
- Köhler, Sebastian;
- Eijssen, Lars M.T.;
- Rutten, Bart P.F.;
- Shireby, Gemma;
- Torkamani, Ali;
- Creese, Byron;
- Leentjens, Albert F.G.;
- Lunnon, Katie;
- Pishva, Ehsan
Publication type:
Article
Role of Platelet Glycoprotein VI and Tyrosine Kinase Syk in Thrombus Formation on Collagen-Like Surfaces.
Published in:
International Journal of Molecular Sciences, 2019, v. 20, n. 11, p. 2788, doi. 10.3390/ijms20112788
By:
- Jooss, Natalie J.;
- De Simone, Ilaria;
- Provenzale, Isabella;
- Fernández, Delia I.;
- Brouns, Sanne L.N.;
- Farndale, Richard W.;
- Henskens, Yvonne M.C.;
- Kuijpers, Marijke J.E.;
- ten Cate, Hugo;
- van der Meijden, Paola E.J.;
- Cavill, Rachel;
- Heemskerk, Johan W.M.
Publication type:
Article
An agent-based approach for modelling and simulation of glycoprotein VI receptor diffusion, localisation and dimerisation in platelet lipid rafts.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-30884-6
By:
- Tantiwong, Chukiat;
- Dunster, Joanne L.;
- Cavill, Rachel;
- Tomlinson, Michael G.;
- Wierling, Christoph;
- Heemskerk, Johan W. M.;
- Gibbins, Jonathan M.
Publication type:
Article
Application of transfer learning to predict drug-induced human in vivo gene expression changes using rat in vitro and in vivo data.
Published in:
PLoS ONE, 2023, v. 18, n. 11, p. 1, doi. 10.1371/journal.pone.0292030
By:
- O'Donovan, Shauna D.;
- Cavill, Rachel;
- Wimmenauer, Florian;
- Lukas, Alexander;
- Stumm, Tobias;
- Smirnov, Evgueni;
- Lenz, Michael;
- Ertaylan, Gokhan;
- Jennen, Danyel G. J.;
- van Riel, Natal A. W.;
- Driessens, Kurt;
- Peeters, Ralf L. M.;
- de Kok, Theo M. C. M.
Publication type:
Article
DTW4Omics: Comparing Patterns in Biological Time Series.
Published in:
PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0071823
By:
- Cavill, Rachel;
- Kleinjans, Jos;
- Briedé, Jacob-Jan
Publication type:
Article
Use of deep learning methods to translate drug-induced gene expression changes from rat to human primary hepatocytes.
Published in:
PLoS ONE, 2020, v. 15, n. 8, p. 1, doi. 10.1371/journal.pone.0236392
By:
- O'Donovan, Shauna D.;
- Driessens, Kurt;
- Lopatta, Daniel;
- Wimmenauer, Florian;
- Lukas, Alexander;
- Neeven, Jelmer;
- Stumm, Tobias;
- Smirnov, Evgueni;
- Lenz, Michael;
- Ertaylan, Gokhan;
- Jennen, Danyel G. J.;
- van Riel, Natal A. W.;
- Cavill, Rachel;
- Peeters, Ralf L. M.;
- de Kok, Theo M. C. M.
Publication type:
Article
Consensus-Phenotype Integration of Transcriptomic and Metabolomic Data Implies a Role for Metabolism in the Chemosensitivity of Tumour Cells.
Published in:
PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001113
By:
- Cavill, Rachel;
- Kamburov, Atanas;
- Ellis1, James K.;
- Athersuch, Toby J.;
- Blagrove, Marcus S. C.;
- Herwig, Ralf;
- Ebbels, Timothy M. D.;
- Keun, Hector C.
Publication type:
Article
Machine learning-based prediction of cognitive outcomes in de novo Parkinson's disease.
Published in:
NPJ Parkinson's Disease, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41531-022-00409-5
By:
- Harvey, Joshua;
- Reijnders, Rick A.;
- Cavill, Rachel;
- Duits, Annelien;
- Köhler, Sebastian;
- Eijssen, Lars;
- Rutten, Bart P. F.;
- Shireby, Gemma;
- Torkamani, Ali;
- Creese, Byron;
- Leentjens, Albert F. G.;
- Lunnon, Katie;
- Pishva, Ehsan
Publication type:
Article
Machine learning-based prediction of cognitive outcomes in de novo Parkinson's disease.
Published in:
NPJ Parkinson's Disease, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41531-022-00409-5
By:
- Harvey, Joshua;
- Reijnders, Rick A.;
- Cavill, Rachel;
- Duits, Annelien;
- Köhler, Sebastian;
- Eijssen, Lars;
- Rutten, Bart P. F.;
- Shireby, Gemma;
- Torkamani, Ali;
- Creese, Byron;
- Leentjens, Albert F. G.;
- Lunnon, Katie;
- Pishva, Ehsan
Publication type:
Article
Transcriptomic and metabolomic data integration.
Published in:
Briefings in Bioinformatics, 2016, v. 17, n. 5, p. 891, doi. 10.1093/bib/bbv090
By:
- Cavill, Rachel;
- Jennen, Danyel;
- Kleinjans, Jos;
- Jan Briedé, Jacob
Publication type:
Article
Identification of platelet function defects by multi-parameter assessment of thrombus formation.
Published in:
Nature Communications, 2014, v. 5, n. 7, p. 4257, doi. 10.1038/ncomms5257
By:
- de Witt, Susanne M.;
- Swieringa, Frauke;
- Cavill, Rachel;
- Lamers, Moniek M.E.;
- van Kruchten, Roger;
- Mastenbroek, Tom;
- Baaten, Constance;
- Coort, Susan;
- Pugh, Nicholas;
- Schulz, Ansgar;
- Scharrer, Inge;
- Jurk, Kerstin;
- Zieger, Barbara;
- Clemetson, Kenneth J.;
- Farndale, Richard W.;
- Heemskerk, Johan W.M.;
- Cosemans, Judith M.E.M.
Publication type:
Article
The effect of tumor composition on the success of adaptive therapy: The case of metastatic Castrate-Resistant Prostate Cancer.
Published in:
PLoS ONE, 2024, v. 19, n. 9, p. 1, doi. 10.1371/journal.pone.0308173
By:
- Salvioli, Monica;
- Vandelaer, Len;
- Baena, Esther;
- Schneider, Katharina;
- Cavill, Rachel;
- Staňková, Kateřina
Publication type:
Article
Assessment of a complete and classified platelet proteome from genome-wide transcripts of human platelets and megakaryocytes covering platelet functions.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-91661-x
By:
- Huang, Jingnan;
- Swieringa, Frauke;
- Solari, Fiorella A.;
- Provenzale, Isabella;
- Grassi, Luigi;
- De Simone, Ilaria;
- Baaten, Constance C. F. M. J.;
- Cavill, Rachel;
- Sickmann, Albert;
- Frontini, Mattia;
- Heemskerk, Johan W. M.
Publication type:
Article
Platelet-primed interactions of coagulation and anticoagulation pathways in flow-dependent thrombus formation.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-68438-9
By:
- Brouns, Sanne L. N.;
- van Geffen, Johanna P.;
- Campello, Elena;
- Swieringa, Frauke;
- Spiezia, Luca;
- van Oerle, René;
- Provenzale, Isabella;
- Verdoold, Remco;
- Farndale, Richard W.;
- Clemetson, Kenneth J.;
- Spronk, Henri M. H.;
- van der Meijden, Paola E. J.;
- Cavill, Rachel;
- Kuijpers, Marijke J. E.;
- Castoldi, Elisabetta;
- Simioni, Paolo;
- Heemskerk, Johan W. M.
Publication type:
Article
Proteomic and metabolomic responses to connexin43 silencing in primary hepatocyte cultures.
Published in:
Archives of Toxicology, 2013, v. 87, n. 5, p. 883, doi. 10.1007/s00204-012-0994-0
By:
- Vinken, Mathieu;
- Maes, Michaël;
- Cavill, Rachel;
- Valkenborg, Dirk;
- Ellis, James;
- Decrock, Elke;
- Leybaert, Luc;
- Staes, An;
- Gevaert, Kris;
- Oliveira, André;
- Menezes, Gustavo;
- Cogliati, Bruno;
- Dagli, Maria;
- Ebbels, Timothy;
- Witters, Erwin;
- Keun, Hector;
- Vanhaecke, Tamara;
- Rogiers, Vera
Publication type:
Article
PSnpBind-ML: predicting the effect of binding site mutations on protein-ligand binding affinity.
Published in:
Journal of Cheminformatics, 2023, v. 15, n. 1, p. 1, doi. 10.1186/s13321-023-00701-3
By:
- Ammar, Ammar;
- Cavill, Rachel;
- Evelo, Chris;
- Willighagen, Egon
Publication type:
Article
PSnpBind: a database of mutated binding site protein–ligand complexes constructed using a multithreaded virtual screening workflow.
Published in:
Journal of Cheminformatics, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13321-021-00573-5
By:
- Ammar, Ammar;
- Cavill, Rachel;
- Evelo, Chris;
- Willighagen, Egon
Publication type:
Article
Identification of a gene network driving the attenuated response to lipopolysaccharide of monocytes from hypertensive coronary artery disease patients.
Published in:
Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1286382
By:
- Chang Lu;
- Donners, Marjo M. P. C.;
- de Baaij, Julius B. J.;
- Han Jin;
- Otten, Jeroen J. T.;
- Manca, Marco;
- van Zonneveld, Anton Jan;
- Jukema, J. Wouter;
- Kraaijeveld, Adriaan;
- Kuiper, Johan;
- Pasterkamp, Gerard;
- Mees, Barend;
- Sluimer, Judith C.;
- Cavill, Rachel;
- Karel, Joël M. H.;
- Goossens, Pieter;
- Biessen, Erik A. L.
Publication type:
Article
Pattern recognition methods to relate time profiles of gene expression with phenotypic data: a comparative study.
Published in:
Bioinformatics, 2015, v. 31, n. 13, p. 2115, doi. 10.1093/bioinformatics/btv108
By:
- Hendrickx, Diana M.;
- Jennen, Danyel G. J.;
- Briedé, Jacob J.;
- Cavill, Rachel;
- de Kok, Theo M.;
- Kleinjans, Jos C. S.
Publication type:
Article
Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA.
Published in:
Bioinformatics, 2011, v. 27, n. 20, p. 2917, doi. 10.1093/bioinformatics/btr499
By:
- Kamburov, Atanas;
- Cavill, Rachel;
- Ebbels, Timothy M. D.;
- Herwig, Ralf;
- Keun, Hector C.
Publication type:
Article
Genetic algorithms for simultaneous variable and sample selection in metabonomics.
Published in:
Bioinformatics, 2009, v. 25, n. 1, p. 112, doi. 10.1093/bioinformatics/btn586
By:
- Cavill, Rachel;
- Keun, Hector C.;
- Holmes, Elaine;
- Lindon, John C.;
- Nicholson, Jeremy K.;
- Ebbels, Timothy M. D.
Publication type:
Article
Deep embedded clustering generalisability and adaptation for integrating mixed datatypes: two critical care cohorts.
Published in:
Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-51699-z
By:
- de Kok, Jip W. T. M.;
- van Rosmalen, Frank;
- Koeze, Jacqueline;
- Keus, Frederik;
- van Kuijk, Sander M. J.;
- Castela Forte, José;
- Schnabel, Ronny M.;
- Driessen, Rob G. H.;
- van Herpt, Thijs T. W.;
- Sels, Jan-Willem E. M.;
- Bergmans, Dennis C. J. J.;
- Lexis, Chris P. H.;
- van Doorn, William P. T. M.;
- Meex, Steven J. R.;
- Xu, Minnan;
- Borrat, Xavier;
- Cavill, Rachel;
- van der Horst, Iwan C. C.;
- van Bussel, Bas C. T.
Publication type:
Article

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