Works by Castanon, Rosa

Results: 11
    1

    The complex architecture and epigenomic impact of plant T-DNA insertions.

    Published in:
    PLoS Genetics, 2019, v. 15, n. 1, p. 1, doi. 10.1371/journal.pgen.1007819
    By:
    • Jupe, Florian;
    • Rivkin, Angeline C.;
    • Sandoval, Justin P.;
    • Chen, Huaming;
    • Castanon, Rosa;
    • Nery, Joseph R.;
    • Zander, Mark;
    • Ecker, Joseph R.;
    • Michael, Todd P.;
    • Motley, S. Timothy;
    • Slotkin, R. Keith
    Publication type:
    Article
    2

    Robust single-cell DNA methylome profiling with snmC-seq2.

    Published in:
    Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-06355-2
    By:
    • Luo, Chongyuan;
    • Rivkin, Angeline;
    • Zhou, Jingtian;
    • Sandoval, Justin P.;
    • Kurihara, Laurie;
    • Lucero, Jacinta;
    • Castanon, Rosa;
    • Nery, Joseph R.;
    • Pinto-Duarte, António;
    • Bui, Brian;
    • Fitzpatrick, Conor;
    • O’Connor, Carolyn;
    • Ruga, Seth;
    • Van Eden, Marc E.;
    • Davis, David A.;
    • Mash, Deborah C.;
    • Behrens, M. Margarita;
    • Ecker, Joseph R.
    Publication type:
    Article
    3

    Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells.

    Published in:
    Nature, 2011, v. 471, n. 7336, p. 68, doi. 10.1038/nature09798
    By:
    • Lister, Ryan;
    • Pelizzola, Mattia;
    • Kida, Yasuyuki S.;
    • Hawkins, R. David;
    • Nery, Joseph R.;
    • Hon, Gary;
    • Antosiewicz-Bourget, Jessica;
    • O'Malley, Ronan;
    • Castanon, Rosa;
    • Klugman, Sarit;
    • Downes, Michael;
    • Yu, Ruth;
    • Stewart, Ron;
    • Ren, Bing;
    • Thomson, James A.;
    • Evans, Ronald M.;
    • Ecker, Joseph R.
    Publication type:
    Article
    4
    5
    6

    Abnormalities in human pluripotent cells due to reprogramming mechanisms.

    Published in:
    Nature, 2014, v. 511, n. 7508, p. 177, doi. 10.1038/nature13551
    By:
    • Ma, Hong;
    • Morey, Robert;
    • O'Neil, Ryan C.;
    • He, Yupeng;
    • Daughtry, Brittany;
    • Schultz, Matthew D.;
    • Hariharan, Manoj;
    • Nery, Joseph R.;
    • Castanon, Rosa;
    • Sabatini, Karen;
    • Thiagarajan, Rathi D.;
    • Tachibana, Masahito;
    • Kang, Eunju;
    • Tippner-Hedges, Rebecca;
    • Ahmed, Riffat;
    • Gutierrez, Nuria Marti;
    • Van Dyken, Crystal;
    • Polat, Alim;
    • Sugawara, Atsushi;
    • Sparman, Michelle
    Publication type:
    Article
    7

    Dnmt3a knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3.

    Published in:
    eLife, 2022, p. 1, doi. 10.7554/eLife.66909
    By:
    • Junhao Li;
    • Pinto-Duarte, Antonio;
    • Zander, Mark;
    • Cuoco, Michael S.;
    • Chi-Yu Lai;
    • Osteen, Julia;
    • Linjing Fang;
    • Chongyuan Luo;
    • Lucero, Jacinta D.;
    • Gomez-Castanon, Rosa;
    • Nery, Joseph R.;
    • Silva-Garcia, Isai;
    • Yan Pang;
    • Sejnowski, Terrence J.;
    • Powell, Susan B.;
    • Ecker, Joseph R.;
    • Mukamel, Eran A.;
    • Behrens, M. Margarita
    Publication type:
    Article
    8

    Dnmt3a knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3.

    Published in:
    eLife, 2022, p. 1, doi. 10.7554/eLife.66909
    By:
    • Junhao Li;
    • Pinto-Duarte, Antonio;
    • Zander, Mark;
    • Cuoco, Michael S.;
    • Chi-Yu Lai;
    • Osteen, Julia;
    • Linjing Fang;
    • Chongyuan Luo;
    • Lucero, Jacinta D.;
    • Gomez-Castanon, Rosa;
    • Nery, Joseph R.;
    • Silva-Garcia, Isai;
    • Yan Pang;
    • Sejnowski, Terrence J.;
    • Powell, Susan B.;
    • Ecker, Joseph R.;
    • Mukamel, Eran A.;
    • Behrens, M. Margarita
    Publication type:
    Article
    9

    Iterative single-cell multi-omic integration using online learning.

    Published in:
    Nature Biotechnology, 2021, v. 39, n. 8, p. 1000, doi. 10.1038/s41587-021-00867-x
    By:
    • Gao, Chao;
    • Liu, Jialin;
    • Kriebel, April R.;
    • Preissl, Sebastian;
    • Luo, Chongyuan;
    • Castanon, Rosa;
    • Sandoval, Justin;
    • Rivkin, Angeline;
    • Nery, Joseph R.;
    • Behrens, Margarita M.;
    • Ecker, Joseph R.;
    • Ren, Bing;
    • Welch, Joshua D.
    Publication type:
    Article
    10
    11

    Single nucleus multi-omics regulatory landscape of the murine pituitary.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22859-w
    By:
    • Ruf-Zamojski, Frederique;
    • Zhang, Zidong;
    • Zamojski, Michel;
    • Smith, Gregory R.;
    • Mendelev, Natalia;
    • Liu, Hanqing;
    • Nudelman, German;
    • Moriwaki, Mika;
    • Pincas, Hanna;
    • Castanon, Rosa Gomez;
    • Nair, Venugopalan D.;
    • Seenarine, Nitish;
    • Amper, Mary Anne S.;
    • Zhou, Xiang;
    • Ongaro, Luisina;
    • Toufaily, Chirine;
    • Schang, Gauthier;
    • Nery, Joseph R.;
    • Bartlett, Anna;
    • Aldridge, Andrew
    Publication type:
    Article