Works by Carpenter, Eric J.

Results: 23

Cyclotide discovery in Gentianales revisited-identification and characterization of cyclic cystine-knot peptides and their phylogenetic distribution in Rubiaceae plants.

Published in:

Biopolymers, 2013, v. 100, n. 5, p. 438, doi. 10.1002/bip.22328

By:

Koehbach, Johannes;
Attah, Alfred F.;
Berger, Andreas;
Hellinger, Roland;
Kutchan, Toni M.;
Carpenter, Eric J.;
Rolf, Megan;
Sonibare, Mubo A.;
Moody, Jones O.;
Wong, Gane Ka‐Shu;
Dessein, Steven;
Greger, Harald;
Gruber, Christian W.

Publication type:

Article

Metagenomics Versus Metatranscriptomics of the Murine Gut Microbiome for Assessing Microbial Metabolism During Inflammation.

Published in:

Frontiers in Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fmicb.2022.829378

By:

Jovel, Juan;
Nimaga, Aissata;
Jordan, Tracy;
O'Keefe, Sandra;
Patterson, Jordan;
Thiesen, Aducio;
Hotte, Naomi;
Bording-Jorgensen, Michael;
Subedi, Sudip;
Hamilton, Jessica;
Carpenter, Eric J.;
Lauga, Béatrice;
Elahi, Shokrollah;
Madsen, Karen L.;
Wong, Gane Ka-Shu;
Mason, Andrew L.

Publication type:

Article

Chemoenzymatic synthesis of genetically-encoded multivalent liquid N-glycan arrays.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40900-y

By:

Lin, Chih-Lan;
Sojitra, Mirat;
Carpenter, Eric J.;
Hayhoe, Ellen S.;
Sarkar, Susmita;
Volker, Elizabeth A.;
Wang, Chao;
Bui, Duong T.;
Yang, Loretta;
Klassen, John S.;
Wu, Peng;
Macauley, Matthew S.;
Lowary, Todd L.;
Derda, Ratmir

Publication type:

Article

A genome triplication associated with early diversification of the core eudicots.

Published in:

Genome Biology, 2012, v. 13, n. 1, p. 1, doi. 10.1186/gb-2012-13-1-r3

By:

Jiao, Yuannian;
Leebens-Mack, Jim;
Ayyampalayam, Saravanaraj;
Bowers, John E.;
McKain, Michael R.;
McNeal, Joel;
Rolf, Megan;
Ruzicka, Daniel R.;
Wafula, Eric;
Wickett, Norman J.;
Xiaolei Wu;
Yong Zhang;
Jun Wang;
Yeting Zhang;
Carpenter, Eric J.;
Deyholos, Michael K.;
Kutchan, Toni M.;
Chanderbali, Andre S.;
Soltis, Pamela S.;
Stevenson, Dennis W.

Publication type:

Article

Measuring carbohydrate recognition profile of lectins on live cells using liquid glycan array (LiGA).

Published in:

Nature Protocols, 2025, v. 20, n. 4, p. 989, doi. 10.1038/s41596-024-01070-3

By:

Sojitra, Mirat;
Schmidt, Edward N.;
Lima, Guilherme M.;
Carpenter, Eric J.;
McCord, Kelli A.;
Atrazhev, Alexey;
Macauley, Matthew S.;
Derda, Ratmir

Publication type:

Article

Collection Development in the Electronic Environment: Shifting Priorities,.

Published in:

Portal: Libraries & the Academy, 2001, v. 1, n. 3, p. 360, doi. 10.1353/pla.2001.0037

By:

Carpenter, Eric J.

Publication type:

Article

Homology modeling of tubulin: influence predictions for microtubule’s biophysical properties.

Published in:

European Biophysics Journal, 2006, v. 36, n. 1, p. 35, doi. 10.1007/s00249-006-0088-0

By:

Carpenter, Eric J.;
Huzil, J. Torin;
Ludueña, Richard F.;
Tuszynski, Jack A.

Publication type:

Article

The Origin and Evolution of the Plant Cell Surface: Algal Integrin-Associated ProteinsandaNewFamily of Integrin-Like Cytoskeleton-ECM Linker Proteins.

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 6, p. 1580, doi. 10.1093/gbe/evv089

By:

Becker, Burkhard;
Doan, Jean Michel;
Wustman, Brandon;
Carpenter, Eric J.;
Li Chen;
Yong Zhang;
Wong, Gane K.-S.;
Melkonian, Michael

Publication type:

Article

BOOK REVIEWS.

Published in:

Collection Management, 1991, v. 14, n. 3/4, p. 201, doi. 10.1300/J105v14n03_14

By:

Kaser, David;
Tucker, John Mark;
Kusack, James M.;
Hernon, Peter;
Storck, Bernadette R.;
DePew, John N.;
Zager, Daniel;
Carpenter, Eric J.;
Bordeianu, Sever M.

Publication type:

Article

BOOK REVIEWS.

Published in:

Collection Management, 1991, v. 13, n. 4, p. 89, doi. 10.1300/J105v13n04_08

By:

Goedeken, Ed;
Adams, Mignon;
Tucker, John Mark;
Sutherland, Michael C.;
Carpenter, Eric J.;
Oltmanns, Gail V.;
Hernon, Peter;
Strauch, Katina

Publication type:

Article

BOOK REVIEWS.

Published in:

Collection Management, 1983, v. 5, n. 1/2, p. 115, doi. 10.1300/J105v05n01_09

By:

Shapiro, Beth J.;
McClung, Patricia A.;
Carpenter, Eric J.;
Ezzell, Joline R.;
Tuttle, Marcia;
Astle, Deana L.;
Hall, Catherine M.;
Mallach, Stanley;
Buckland, Michael K.;
Davis, Douglas A.;
Lowell, Howard P.;
Editorial Submission, Haworth

Publication type:

Article

Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing.

Published in:

Molecular Biology & Evolution, 2015, v. 32, n. 8, p. 2001, doi. 10.1093/molbev/msv081

By:

Ya Yang;
Moore, Michael J.;
Brockington, Samuel F.;
Soltis, Douglas E.;
Gane Ka-Shu Wong;
Carpenter, Eric J.;
Yong Zhang;
Li Chen;
Zhixiang Yan;
Yinlong Xie;
Sage, Rowan F.;
Covshoff, Sarah;
Hibberd, Julian M.;
Nelson, Matthew N.;
Smith, Stephen A.

Publication type:

Article

Tubulin electrostatics and isotype specific drug binding.

Published in:

Canadian Journal of Physics, 2008, v. 86, n. 4, p. 635, doi. 10.1139/P07-199

By:

Tuszyński, Jack A.;
Malinski, Wojtek;
Carpenter, Eric J.;
Luchko, Tyler;
Huzil, J. Torin;
Ludeña, Richard F.

Publication type:

Article

Addendum: Independent optical excitation of distinct neural populations.

Published in:

Nature Methods, 2014, v. 11, n. 9, p. 972, doi. 10.1038/nmeth0914-972

By:

Klapoetke, Nathan C;
Murata, Yasunobu;
Kim, Sung Soo;
Pulver, Stefan R;
Birdsey-Benson, Amanda;
Cho, Yong Ku;
Morimoto, Tania K;
Chuong, Amy S;
Carpenter, Eric J;
Tian, Zhijian;
Wang, Jun;
Xie, Yinlong;
Yan, Zhixiang;
Zhang, Yong;
Chow, Brian Y;
Surek, Barbara;
Melkonian, Michael;
Jayaraman, Vivek;
Constantine-Paton, Martha;
Wong, Gane Ka-Shu

Publication type:

Article

Corrigendum: Independent optical excitation of distinct neural populations.

Published in:

Nature Methods, 2014, v. 11, n. 9, p. 971, doi. 10.1038/nmeth0914-971d

By:

Klapoetke, Nathan C;
Murata, Yasunobu;
Kim, Sung Soo;
Pulver, Stefan R;
Birdsey-Benson, Amanda;
Cho, Yong Ku;
Morimoto, Tania K;
Chuong, Amy S;
Carpenter, Eric J;
Tian, Zhijian;
Wang, Jun;
Xie, Yinlong;
Yan, Zhixiang;
Zhang, Yong;
Chow, Brian Y;
Surek, Barbara;
Melkonian, Michael;
Jayaraman, Vivek;
Constantine-Paton, Martha;
Wong, Gane Ka-Shu

Publication type:

Article

Independent optical excitation of distinct neural populations.

Published in:

Nature Methods, 2014, v. 11, n. 3, p. 338, doi. 10.1038/nmeth.2836

By:

Klapoetke, Nathan C;
Murata, Yasunobu;
Kim, Sung Soo;
Pulver, Stefan R;
Birdsey-Benson, Amanda;
Cho, Yong Ku;
Morimoto, Tania K;
Chuong, Amy S;
Carpenter, Eric J;
Tian, Zhijian;
Wang, Jun;
Xie, Yinlong;
Yan, Zhixiang;
Zhang, Yong;
Chow, Brian Y;
Surek, Barbara;
Melkonian, Michael;
Jayaraman, Vivek;
Constantine-Paton, Martha;
Wong, Gane Ka-Shu

Publication type:

Article

Impact of sequencing depth and technology on de novo RNA-Seq assembly.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-5965-x

By:

Patterson, Jordan;
Carpenter, Eric J.;
Zhu, Zhenzhen;
An, Dan;
Liang, Xinming;
Geng, Chunyu;
Drmanac, Radoje;
Wong, Gane Ka-Shu

Publication type:

Article

Occurrence, structure, and evolution of nitric oxide synthase-like proteins in the plant kingdom.

Published in:

Science Signaling, 2016, v. 9, n. 417, p. 1, doi. 10.1126/scisignal.aad4403

By:

Jeandroz, Sylvain;
Wipf, Daniel;
Stuehr, Dennis J.;
Lamattina, Lorenzo;
Melkonian, Michael;
Zhijian Tian;
Ying Zhu;
Carpenter, Eric J.;
Gane Ka-Shu Wong;
Wendehenne, David

Publication type:

Article

Insights into the Evolution of Hydroxyproline-Rich Glycoproteins from 1000 Plant Transcriptomes.

Published in:

Plant Physiology, 2017, v. 174, n. 2, p. 904, doi. 10.1104/pp.17.00295

By:

Johnson, Kim L.;
Cassin, Andrew M.;
Lonsdale, Andrew;
Ka-Shu Wong, Gane;
Soltis, Douglas E.;
Miles, Nicholas W.;
Melkonian, Michael;
Melkonian, Barbara;
Deyholos, Michael K.;
Leebens-Mack, James;
Rothfels, Carl J.;
Stevenson, Dennis W.;
Graham, Sean W.;
Xumin Wang;
Shuangxiu Wu;
Pires, J. Chris;
Edger, Patrick P.;
Carpenter, Eric J.;
Bacic, Antony;
Doblin, Monika S.

Publication type:

Article

Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP).

Published in:

GigaScience, 2019, v. 8, n. 10, p. N.PAG, doi. 10.1093/gigascience/giz126

By:

Carpenter, Eric J;
Matasci, Naim;
Ayyampalayam, Saravanaraj;
Wu, Shuangxiu;
Sun, Jing;
Yu, Jun;
Jimenez Vieira, Fabio Rocha;
Bowler, Chris;
Dorrell, Richard G;
Gitzendanner, Matthew A;
Li, Ling;
Du, Wensi;
K. Ullrich, Kristian;
Wickett, Norman J;
Barkmann, Todd J;
Barker, Michael S;
Leebens-Mack, James H;
Wong, Gane Ka-Shu

Publication type:

Article

Isolation of a Human Betaretrovirus from Patients with Primary Biliary Cholangitis.

Published in:

Viruses (1999-4915), 2022, v. 14, n. 5, p. 886, doi. 10.3390/v14050886

By:

Goubran, Mariam;
Wang, Weiwei;
Indik, Stanislav;
Faschinger, Alexander;
Wasilenko, Shawn T.;
Bintner, Jasper;
Carpenter, Eric J.;
Zhang, Guangzhi;
Nuin, Paulo;
Macintyre, Georgina;
Wong, Gane K.-S.;
Mason, Andrew L.

Publication type:

Article

Evaluating Methods for Isolating Total RNA and Predicting the Success of Sequencing Phylogenetically Diverse Plant Transcriptomes.

Published in:

PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0050226

By:

Johnson, Marc T. J.;
Carpenter, Eric J.;
Zhijian Tian;
Bruskiewich, Richard;
Burris, Jason N.;
Carrigan, Charlotte T.;
Chase, Mark W.;
Clarke, Neil D.;
Covshoff, Sarah;
dePamphilis, Claude W.;
Edger, Patrick P.;
Goh, Falicia;
Graham, Sean;
Greiner, Stephan;
Hibberd, Julian M.;
Jordon-Thaden, Ingrid;
Kutchan, Toni M.;
Leebens-Mack, James;
Melkonian, Michael;
Miles, Nicholas

Publication type:

Article

Genetically encoded multivalent liquid glycan array displayed on M13 bacteriophage.

Published in:

FASEB Journal, 2022, v. 36, p. N.PAG, doi. 10.1096/fasebj.2022.36.S1.R3002

By:

Sojitra, Mirat;
Sarkar, Susmita;
Maghera, Jasmine;
Schmidt, Edward N.;
Rodrigues, Emily;
Carpenter, Eric J.;
Seth, Shaurya;
Vinals, Daniel F.;
Bennett, Nicholas J.;
Reddy, Revathi;
Khalil, Amira;
Xue, Xiaochao;
Bell, Michael R.;
Zheng, Ruixiang B.;
Zhang, Ping;
Nycholat, Corwin;
Bailey, Justin J.;
Ling, Chang‐Chun;
Lowary, Todd L.;
Paulson, James C.

Publication type:

Article