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Identification of defence-related genes expressed in coffee and citrus during infection by Xylella fastidiosa.
Published in:
European Journal of Plant Pathology, 2011, v. 130, n. 4, p. 529, doi. 10.1007/s10658-011-9775-5
By:
- Carazzolle, Marcelo F.;
- Rabello, Fernanda R.;
- Martins, Natália F.;
- de Souza, Alessandra A.;
- do Amaral, Alexandre M.;
- Freitas-Astua, Juliana;
- Pereira, Gonçalo A. G.;
- Machado, Marcos A.;
- Mehta, Angela
Publication type:
Article
Adaptive evolution of Moniliophthora PR-1 proteins towards its pathogenic lifestyle.
Published in:
BMC Ecology & Evolution, 2021, v. 21, p. 1, doi. 10.1186/s12862-021-01818-5
By:
- Vasconcelos, Adrielle A.;
- José, Juliana;
- Tokimatu, Paulo M.;
- Camargo, Antonio P.;
- Teixeira, Paulo J. P. L.;
- Thomazella, Daniela P. T.;
- do Prado, Paula F. V.;
- Fiorin, Gabriel L.;
- Costa, Juliana L.;
- Figueira, Antonio;
- Carazzolle, Marcelo F.;
- Pereira, Gonçalo A. G.;
- Baroni, Renata M.
Publication type:
Article
Expanding the Knowledge on Lignocellulolytic and Redox Enzymes of Worker and Soldier Castes from the Lower Termite Coptotermes gestroi.
Published in:
Frontiers in Microbiology, 2016, v. 7, p. 1, doi. 10.3389/fmicb.2016.01518
By:
- Franco Cairo, João P. L.;
- Carazzolle, Marcelo F.;
- Leonardo, Flávia C.;
- Mofatto, Luciana S.;
- Brenelli, Lívia B.;
- Gonçalves, Thiago A.;
- Uchima, Cristiane A.;
- Domingues, Romênia R.;
- Alvarez, Thabata M.;
- Tramontina, Robson;
- Vidal, Ramon O.;
- Costa, Fernando F.;
- Costa-Leonardo, Ana M.;
- Leme, Adriana F. Paes;
- Pereira, Gonçalo A. G.;
- Squina, Fabio M.
Publication type:
Article
Integrated Proteomics Identified Up-Regulated Focal Adhesion-Mediated Proteins in Human Squamous Cell Carcinoma in an Orthotopic Murine Model.
Published in:
PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0098208
By:
- Granato, Daniela C.;
- Zanetti, Mariana R.;
- Kawahara, Rebeca;
- Yokoo, Sami;
- Domingues, Romênia R.;
- Aragão, Annelize Z.;
- Agostini, Michelle;
- Carazzolle, Marcelo F.;
- Vidal, Ramon O.;
- Flores, Isadora L.;
- Korvala, Johanna;
- Cervigne, Nilva K.;
- Silva, Alan R. S.;
- Coletta, Ricardo D.;
- Graner, Edgard;
- Sherman, Nicholas E.;
- Leme, Adriana F. Paes
Publication type:
Article
Transcriptional Activity, Chromosomal Distribution and Expression Effects of Transposable Elements in <i>Coffea</i> Genomes.
Published in:
PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0078931
By:
- Lopes, Fabrício R.;
- Jjingo, Daudi;
- da Silva, Carlos R. M.;
- Andrade, Alan C.;
- Marraccini, Pierre;
- Teixeira, João B.;
- Carazzolle, Marcelo F.;
- Pereira, Gonçalo A. G.;
- Pereira, Luiz Filipe P.;
- Vanzela, André L. L.;
- Wang, Lu;
- Jordan, I. King;
- Carareto, Claudia M. A.
Publication type:
Article
Deep Sequencing Reveals Differences in the Transcriptional Landscapes of Fibers from Two Cultivated Species of Cotton.
Published in:
PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0048855
By:
- Lacape, Jean-Marc;
- Claverie, Michel;
- Vidal, Ramon O.;
- Carazzolle, Marcelo F.;
- Guimarães Pereira, Gonçalo A.;
- Ruiz, Manuel;
- Pré, Martial;
- Llewellyn, Danny;
- Al-Ghazi, Yves;
- Jacobs, John;
- Dereeper, Alexis;
- Huguet, Stéphanie;
- Giband, Marc;
- Lanaud, Claire
Publication type:
Article
An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora.
Published in:
BMC Plant Biology, 2011, v. 11, n. 1, p. 30, doi. 10.1186/1471-2229-11-30
By:
- Mondego, Jorge M. C.;
- Vidal, Ramon O.;
- Carazzolle, Marcelo F.;
- Tokuda, Eric K.;
- Parizzi, Lucas P.;
- Costa, Gustavo G. L.;
- Pereira, Luiz F. P.;
- Andrade, Alan C.;
- Colombo, Carlos A.;
- Vieira, Luiz G. E.;
- Pereira, Gonçalo A. G.
Publication type:
Article
Brazilian industrial yeasts show high fermentative performance in high solids content for corn ethanol process.
Published in:
Bioresources & Bioprocessing, 2022, v. 9, n. 1, p. 1, doi. 10.1186/s40643-022-00580-w
By:
- Secches, Thaís O.;
- Santos Viera, Carla F.;
- Pereira, Thaynara K. E.;
- Santos, Victor T. O.;
- Ribeirodos Santos, Jade;
- Pereira, Gonçalo A. G.;
- Carazzolle, Marcelo F.
Publication type:
Article
Identification of bovine CpG SNPs as potential targets for epigenetic regulation via DNA methylation.
Published in:
PLoS ONE, 2019, v. 14, n. 9, p. 1, doi. 10.1371/journal.pone.0222329
By:
- Maldonado, Mariângela B. C.;
- de Rezende Neto, Nelson B.;
- Nagamatsu, Sheila T.;
- Carazzolle, Marcelo F.;
- Hoff, Jesse L.;
- Whitacre, Lynsey K.;
- Schnabel, Robert D.;
- Behura, Susanta K.;
- McKay, Stephanie D.;
- Taylor, Jeremy F.;
- Lopes, Flavia L.
Publication type:
Article
Synthesis and testing of novel alternative oxidase (AOX) inhibitors with antifungal activity against Moniliophthora perniciosa (Stahel), the causal agent of witches' broom disease of cocoa, and other phytopathogens.
Published in:
Pest Management Science, 2019, v. 75, n. 5, p. 1295, doi. 10.1002/ps.5243
By:
- Pires, Bárbara A;
- Coradini, Alessandro;
- Mello, Fellipe;
- Marschalk, Cidnei;
- Carazzolle, Marcelo F;
- Pereira, Gonçalo AG;
- Barsottini, Mario RO;
- Vieira, Maria L;
- Pereira, José GC;
- Sanitá, Jaqueline;
- Cordeiro, Artur T;
- Oliveira, Paulo SL;
- Sforça, Maurício L;
- Rocco, Silvana A;
- Costa, Paulo CS;
- Miranda, Paulo CML;
- Silva, Eder M;
- Paschoal, Daniele;
- Figueira, Antonio;
- Rodrigues, Fábio HS
Publication type:
Article
QTL mapping of a Brazilian bioethanol strain links the cell wall protein-encoding gene GAS1 to low pH tolerance in S. cerevisiae.
Published in:
Biotechnology for Biofuels, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13068-021-02079-6
By:
- Coradini, Alessandro L. V.;
- da Silveira Bezerra de Mello, Fellipe;
- Furlan, Monique;
- Maneira, Carla;
- Carazzolle, Marcelo F.;
- Pereira, Gonçalo Amarante Guimaraes;
- Teixeira, Gleidson Silva
Publication type:
Article
A Multiomics Perspective on Plant Cell Wall-Degrading Enzyme Production: Insights from the Unexploited Fungus Trichoderma erinaceum.
Published in:
Journal of Fungi, 2024, v. 10, n. 6, p. 407, doi. 10.3390/jof10060407
By:
- de Assis, Michelle A.;
- da Silva, Jovanderson J. B.;
- de Carvalho, Lucas M.;
- Parreiras, Lucas S.;
- Cairo, João Paulo L. F.;
- Marone, Marina P.;
- Gonçalves, Thiago A.;
- Silva, Desireé S.;
- Dantzger, Miriam;
- de Figueiredo, Fernanda L.;
- Carazzolle, Marcelo F.;
- Pereira, Gonçalo A. G.;
- Damasio, André
Publication type:
Article
Saccharomyces cerevisiae transcriptional reprograming due to bacterial contamination during industrial scale bioethanol production.
Published in:
Microbial Cell Factories, 2015, v. 14, n. 1, p. 1, doi. 10.1186/s12934-015-0196-6
By:
- Carvalho-Netto, Osmar V.;
- Carazzolle, Marcelo F.;
- Mofatto, Luciana S.;
- Teixeira, Paulo J. P. L.;
- Noronha, Melline F.;
- Calderón, Luige A. L.;
- Mieczkowski, Piotr A.;
- Argueso, Juan Lucas;
- Pereira, Gonçalo A. G.
Publication type:
Article
Saccharomyces cerevisiae transcriptional reprograming due to bacterial contamination during industrial scale bioethanol production.
Published in:
Microbial Cell Factories, 2015, v. 14, n. 1, p. 281, doi. 10.1186/s12934-015-0196-6
By:
- Carvalho-Netto, Osmar V.;
- Carazzolle, Marcelo F.;
- Mofatto, Luciana S.;
- Teixeira, Paulo J. P. L.;
- Noronha, Melline F.;
- Calderón, Luige A. L.;
- Mieczkowski, Piotr A.;
- Argueso, Juan Lucas;
- Pereira, Gonçalo A. G.
Publication type:
Article
Identification of putative TAL effector targets of the citrus canker pathogens shows functional convergence underlying disease development and defense response.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-157
By:
- Pereira, Andre L. A.;
- Carazzolle, Marcelo F.;
- Abe, Valeria Y.;
- de Oliveira, Maria L. P.;
- Domingues, Mariane N.;
- Silva, Jaqueline C.;
- Cernadas, Raul A.;
- Benedetti, Celso E.
Publication type:
Article
Large-scale analysis of differential gene expression in coffee genotypes resistant and susceptible to leaf miner-toward the identification of candidate genes for marker assisted-selection.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-66
By:
- Cardoso, Danielle C.;
- Martinati, Juliana C.;
- Giachetto, Poliana F.;
- Vidal, Ramon O.;
- Carazzolle, Marcelo F.;
- Padilha, Lilian;
- Guerreiro-Filho, Oliveiro;
- Maluf, Mirian P.
Publication type:
Article
Global analyses of Ceratocystis cacaofunesta mitochondria: from genome to proteome.
Published in:
BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-91
By:
- Ambrosio, Alinne Batista;
- do Nascimento, Leandro Costa;
- Oliveira, Bruno V.;
- Teixeira, Paulo José P. L.;
- Tiburcio, Ricardo A.;
- Thomazella, Daniela P. Toledo;
- Leme, Adriana F. P.;
- Carazzolle, Marcelo F.;
- Vidal, Ramon O.;
- Mieczkowski, Piotr;
- Meinhardt, Lyndel W.;
- Pereira, Gonçalo A. G.;
- Cabrera, Odalys G.
Publication type:
Article
The genome sequence of Propionibacterium acidipropionici provides insights into its biotechnological and industrial potential.
Published in:
BMC Genomics, 2012, v. 13, n. 1, p. 562, doi. 10.1186/1471-2164-13-562
By:
- Parizzi, Lucas P.;
- Grassi, Maria Carolina B.;
- Llerena, Luige A.;
- Carazzolle, Marcelo F.;
- Queiroz, Ver�nica L.;
- Lunardi, In�s;
- Zeidler, Ane F.;
- Teixeira, Paulo J. P. L.;
- Mieczkowski, Piotr;
- Rincones, Johana;
- Pereira, Gon�alo A. G.
Publication type:
Article
Identification of novel soybean microRNAs involved in abiotic and biotic stresses.
Published in:
BMC Genomics, 2011, v. 12, n. 1, p. 307, doi. 10.1186/1471-2164-12-307
By:
- Kulcheski, Franceli R.;
- de Oliveira, Luiz F. V.;
- Molina, Lorrayne G.;
- Almerão, Maurício P.;
- Rodrigues, Fabiana A.;
- Marcolino, Juliana;
- Barbosa, Joice F.;
- Stolf-Moreira, Renata;
- Nepomuceno, Alexandre L.;
- Marcelino-Guimarães, Francismar C.;
- Abdelnoor, Ricardo V.;
- Nascimento, Leandro C.;
- Carazzolle, Marcelo F.;
- Pereira, Gonçalo A. G.;
- Margis, Rogério
Publication type:
Article
Unraveling the complex genome of Saccharum spontaneum using Polyploid Gene Assembler.
Published in:
DNA Research, 2019, v. 26, n. 3, p. 205, doi. 10.1093/dnares/dsz001
By:
- Nascimento, Leandro Costa;
- Yanagui, Karina;
- Jose, Juliana;
- Camargo, Eduardo L O;
- Grassi, Maria Carolina B;
- Cunha, Camila P;
- Bressiani, José Antonio;
- Carvalho, Guilherme M A;
- Carvalho, Carlos Roberto;
- Prado, Paula F;
- Mieczkowski, Piotr;
- Pereira, Gonçalo A G;
- Carazzolle, Marcelo F
Publication type:
Article
Uncovering the mouse olfactory long non-coding transcriptome with a novel machine-learning model.
Published in:
DNA Research, 2019, v. 26, n. 4, p. 365, doi. 10.1093/dnares/dsz015
By:
- Camargo, Antonio P;
- Nakahara, Thiago S;
- Firmino, Luiz E R;
- Netto, Paulo H M;
- Nascimento, João B P do;
- Donnard, Elisa R;
- Galante, Pedro A F;
- Carazzolle, Marcelo F;
- Malnic, Bettina;
- Papes, Fabio
Publication type:
Article

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