Agency in evolution of biomolecular communication.
- Published in:
- Annals of the New York Academy of Sciences, 2023, v. 1525, n. 1, p. 88, doi. 10.1111/nyas.15005
- By:
- Publication type:
- Article
Works by Caetano-Anollés, Gustavo
Results: 110
1
2
Untangling the origin of viruses and their impact on cellular evolution.
- Published in:
- Annals of the New York Academy of Sciences, 2015, v. 1341, n. 1, p. 61, doi. 10.1111/nyas.12735
- By:
- Publication type:
- Article
3
The evolutionary significance of the long variable arm in transfer RNA.
- Published in:
- Complexity, 2009, v. 14, n. 5, p. 26, doi. 10.1002/cplx.20255
- By:
- Publication type:
- Article
4
A phylogenomic reconstruction of the protein world based on a genomic census of protein fold architecture.
- Published in:
- Complexity, 2006, v. 12, n. 1, p. 27, doi. 10.1002/cplx.20141
- By:
- Publication type:
- Article
5
Patterns of evolution in Discula fungi and the origin of dogwood anthracnose in North America, studied using arbitrarily amplified and ribosomal DNA.
- Published in:
- Current Genetics, 2001, v. 39, n. 5/6, p. 346, doi. 10.1007/s002940100223
- By:
- Publication type:
- Article
6
Tracing the birth of structural domains from loops during protein evolution.
- Published in:
- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-41556-w
- By:
- Publication type:
- Article
7
Tracing the birth of structural domains from loops during protein evolution.
- Published in:
- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-41556-w
- By:
- Publication type:
- Article
8
The Compressed Vocabulary of Microbial Life.
- Published in:
- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.655990
- By:
- Publication type:
- Article
9
An approach of orthology detection from homologous sequences under minimum evolution.
- Published in:
- Nucleic Acids Research, 2008, v. 36, n. 17, p. e110, doi. 10.1093/nar/gkn485
- By:
- Publication type:
- Article
10
NOBAI: a web server for character coding of geometrical and statistical features in RNA structure.
- Published in:
- Nucleic Acids Research, 2008, v. 36, n. suppl_2, p. W85, doi. 10.1093/nar/gkn220
- By:
- Publication type:
- Article
11
Tracing the evolution of RNA structure in ribosomes.
- Published in:
- Nucleic Acids Research, 2002, v. 30, n. 11, p. 2575, doi. 10.1093/nar/30.11.2575
- By:
- Publication type:
- Article
12
On Protein Loops, Prior Molecular States and Common Ancestors of Life.
- Published in:
- Journal of Molecular Evolution, 2024, v. 92, n. 5, p. 624, doi. 10.1007/s00239-024-10167-y
- By:
- Publication type:
- Article
13
Testing Empirical Support for Evolutionary Models that Root the Tree of Life.
- Published in:
- Journal of Molecular Evolution, 2019, v. 87, n. 2/3, p. 131, doi. 10.1007/s00239-019-09891-7
- By:
- Publication type:
- Article
14
A Dynamic Model for the Evolution of Protein Structure.
- Published in:
- Journal of Molecular Evolution, 2016, v. 82, n. 4/5, p. 230, doi. 10.1007/s00239-016-9740-1
- By:
- Publication type:
- Article
15
Ancestral Insertions and Expansions of rRNA do not Support an Origin of the Ribosome in Its Peptidyl Transferase Center.
- Published in:
- 2015
- By:
- Publication type:
- Letter
16
A Tree of Cellular Life Inferred from a Genomic Census of Molecular Functions.
- Published in:
- Journal of Molecular Evolution, 2014, v. 79, n. 5/6, p. 240, doi. 10.1007/s00239-014-9637-9
- By:
- Publication type:
- Article
17
The Phylogenomic Roots of Modern Biochemistry: Origins of Proteins, Cofactors and Protein Biosynthesis.
- Published in:
- Journal of Molecular Evolution, 2012, v. 74, n. 1/2, p. 1, doi. 10.1007/s00239-011-9480-1
- By:
- Publication type:
- Article
18
Erratum to: The Phylogenomic Roots of Modern Biochemistry: Origins of Proteins, Cofactors and Protein Biosynthesis.
- Published in:
- 2012
- By:
- Publication type:
- Correction Notice
19
Proteome Evolution and the Metabolic Origins of Translation and Cellular Life.
- Published in:
- Journal of Molecular Evolution, 2011, v. 72, n. 1, p. 14, doi. 10.1007/s00239-010-9400-9
- By:
- Publication type:
- Article
20
The Origin of Modern 5S rRNA: A Case of Relating Models of Structural History to Phylogenetic Data.
- Published in:
- 2010
- By:
- Publication type:
- Letter
21
Comparative Genomic and Phylogenetic Analyses Reveal the Evolution of the Core Two-Component Signal Transduction Systems in Enterobacteria.
- Published in:
- Journal of Molecular Evolution, 2010, v. 70, n. 2, p. 167, doi. 10.1007/s00239-009-9318-2
- By:
- Publication type:
- Article
22
The Evolutionary History of the Structure of 5S Ribosomal RNA.
- Published in:
- Journal of Molecular Evolution, 2009, v. 69, n. 5, p. 430, doi. 10.1007/s00239-009-9264-z
- By:
- Publication type:
- Article
23
The Origin and Evolution of tRNA Inferred from Phylogenetic Analysis of Structure.
- Published in:
- Journal of Molecular Evolution, 2008, v. 66, n. 1, p. 21, doi. 10.1007/s00239-007-9050-8
- By:
- Publication type:
- Article
24
Grass Evolution Inferred from Chromosomal Rearrangements and Geometrical and Statistical Features in RNA Structure.
- Published in:
- Journal of Molecular Evolution, 2005, v. 60, n. 5, p. 635, doi. 10.1007/s00239-004-0244-z
- By:
- Publication type:
- Article
25
Universal Sharing Patterns in Proteomes and Evolution of Protein Fold Architecture and Life.
- Published in:
- Journal of Molecular Evolution, 2005, v. 60, n. 4, p. 484, doi. 10.1007/s00239-004-0221-6
- By:
- Publication type:
- Article
26
Evolved RNA Secondary Structure and the Rooting of the Universal Tree of Life.
- Published in:
- Journal of Molecular Evolution, 2002, v. 54, n. 3, p. 333, doi. 10.1007/s00239-001-0048-3
- By:
- Publication type:
- Article
27
Evolution of networks of protein domain organization.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-90498-8
- By:
- Publication type:
- Article
28
Do viruses age?
- Published in:
- BioEssays, 2025, v. 47, n. 1, p. 1, doi. 10.1002/bies.202400241
- By:
- Publication type:
- Article
29
Dissecting "Evolution – The origins and mechanisms of diversity" by Jonathan Bard.
- Published in:
- BioEssays, 2022, v. 44, n. 12, p. 1, doi. 10.1002/bies.202200171
- By:
- Publication type:
- Article
30
The Tree of Life describes a tripartite cellular world: Neglected support from genome structure and codon usage and the fallacy of alignment‐dependent phylogenetic interpretations.
- Published in:
- BioEssays, 2021, v. 43, n. 8, p. 1, doi. 10.1002/bies.202100130
- By:
- Publication type:
- Article
31
The tree of life describes a tripartite cellular world.
- Published in:
- BioEssays, 2021, v. 43, n. 6, p. 1, doi. 10.1002/bies.202000343
- By:
- Publication type:
- Article
32
Bacterial Origin and Reductive Evolution of the CPR Group.
- Published in:
- Genome Biology & Evolution, 2020, v. 12, n. 3, p. 103, doi. 10.1093/gbe/evaa024
- By:
- Publication type:
- Article
33
The organization of domains in proteins obeys Menzerath-Altmann's law of language.
- Published in:
- BMC Systems Biology, 2015, v. 9, n. 1, p. 1, doi. 10.1186/s12918-015-0192-9
- By:
- Publication type:
- Article
34
Tracing protein and proteome history with chronologies and networks: folding recapitulates evolution.
- Published in:
- Expert Review of Proteomics, 2021, v. 18, n. 10, p. 863, doi. 10.1080/14789450.2021.1992277
- By:
- Publication type:
- Article
35
The proteomic complexity and rise of the primordial ancestor of diversified life.
- Published in:
- BMC Evolutionary Biology, 2011, v. 11, n. 1, p. 140, doi. 10.1186/1471-2148-11-140
- By:
- Publication type:
- Article
36
The Natural History of Biocatalytic Mechanisms.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 5, p. 1, doi. 10.1371/journal.pcbi.1003642
- By:
- Publication type:
- Article
37
Global Patterns of Protein Domain Gain and Loss in Superkingdoms.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003452
- By:
- Publication type:
- Article
38
Origin and Evolution of Protein Fold Designs Inferred from Phylogenomic Analysis of CATH Domain Structures in Proteomes.
- Published in:
- PLoS Computational Biology, 2013, v. 9, n. 3, p. 1, doi. 10.1371/journal.pcbi.1003009
- By:
- Publication type:
- Article
39
Evolutionary Optimization of Protein Folding.
- Published in:
- PLoS Computational Biology, 2013, v. 9, n. 1, p. 1, doi. 10.1371/journal.pcbi.1002861
- By:
- Publication type:
- Article
40
The Impact of Oxygen on Metabolic Evolution: A Chemoinformatic Investigation.
- Published in:
- PLoS Computational Biology, 2012, v. 8, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002426
- By:
- Publication type:
- Article
41
Evolutionary Patterns in the Sequence and Structure of Transfer RNA: Early Origins of Archaea and Viruses.
- Published in:
- PLoS Computational Biology, 2008, v. 4, n. 3, p. 1, doi. 10.1371/journal.pcbi.1000018
- By:
- Publication type:
- Article
42
Evolution of macromolecular structure: a 'double tale' of biological accretion and diversification.
- Published in:
- Science Progress, 2018, v. 101, n. 4, p. 360, doi. 10.3184/003685018X15379391431599
- By:
- Publication type:
- Article
43
Transfer RNA and the origins of diversified life.
- Published in:
- Science Progress, 2008, v. 91, n. 3, p. 265, doi. 10.3184/003685008X360650
- By:
- Publication type:
- Article
44
The origin and evolution of viruses inferred from fold family structure.
- Published in:
- Archives of Virology, 2020, v. 165, n. 10, p. 2177, doi. 10.1007/s00705-020-04724-1
- By:
- Publication type:
- Article
45
Editorial: Viruses, genetic exchange, and the tree of life, volume II.
- Published in:
- Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1271181
- By:
- Publication type:
- Article
46
A critical analysis of the current state of virus taxonomy.
- Published in:
- Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1240993
- By:
- Publication type:
- Article
47
Ribosomal accretion, apriorism and the phylogenetic method: a response to Petrov and Williams.
- Published in:
- Frontiers in Genetics, 2015, p. 1, doi. 10.3389/fgene.2015.00194
- By:
- Publication type:
- Article
48
A calibrated chronology of biochemistry reveals a stem line of descent responsible for planetary biodiversity.
- Published in:
- Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00306
- By:
- Publication type:
- Article
49
Emergence of Hierarchical Modularity in Evolving Networks Uncovered by Phylogenomic Analysis.
- Published in:
- Evolutionary Bioinformatics, 2019, p. 1, doi. 10.1177/1176934319872980
- By:
- Publication type:
- Article
50
Rooting Phylogenies and the Tree of Life While Minimizing Ad Hoc and Auxiliary Assumptions.
- Published in:
- Evolutionary Bioinformatics, 2018, n. 14, p. 1, doi. 10.1177/1176934318805101
- By:
- Publication type:
- Article