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Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments.
- Published in:
- Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0658-x
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- Publication type:
- Article
Lack of detection of a human placenta microbiome in samples from preterm and term deliveries.
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- Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0575-4
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- Publication type:
- Article
Optimizing methods and dodging pitfalls in microbiome research.
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- Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0267-5
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- Publication type:
- Article
Nuclemeter: A Reaction-Diffusion Based Method for Quantifying Nucleic Acids Undergoing Enzymatic Amplification.
- Published in:
- Scientific Reports, 2014, p. 1, doi. 10.1038/srep07335
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- Publication type:
- Article
A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples.
- Published in:
- Genome Biology, 2012, v. 13, n. 7, p. r60, doi. 10.1186/gb-2012-13-7-r60
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- Publication type:
- Article
Effects of Mask Reuse on the Oropharyngeal, Skin, and Mask Microbiome.
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- Journal of Infectious Diseases, 2023, v. 228, n. 4, p. 479, doi. 10.1093/infdis/jiad167
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- Publication type:
- Article
Cytomegalovirus Latent Infection is Associated with an Increased Risk of COVID-19-Related Hospitalization.
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- Journal of Infectious Diseases, 2022, v. 226, n. 3, p. 463, doi. 10.1093/infdis/jiac020
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- Publication type:
- Article
Improving natural product research translation: From source to clinical trial.
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- FASEB Journal, 2020, v. 34, n. 1, p. 41, doi. 10.1096/fj.201902143R
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- Publication type:
- Article
The Lung Allograft Microbiome Associates with Pepsin, Inflammation, and Primary Graft Dysfunction.
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- American Journal of Respiratory & Critical Care Medicine, 2022, v. 206, n. 12, p. 1508, doi. 10.1164/rccm.202112-2786OC
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- Publication type:
- Article
A role for glycolipid biosynthesis in severe fever with thrombocytopenia syndrome virus entry.
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- PLoS Pathogens, 2017, v. 13, n. 4, p. 1, doi. 10.1371/journal.ppat.1006316
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- Publication type:
- Article
Destabilization of the gut microbiome marks the end‐stage of simian immunodeficiency virus infection in wild chimpanzees.
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- American Journal of Primatology, 2018, v. 80, n. 1, p. 1, doi. 10.1002/ajp.22515
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- Article
Genome Editing Technologies: Defining a Path to Clinic.
- Published in:
- Molecular Therapy, 2015, v. 23, n. 5, p. 796, doi. 10.1038/mt.2015.54
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- Publication type:
- Article
Charting a Clear Path: The ASGCT Standardized Pathways Conference.
- Published in:
- Molecular Therapy, 2014, v. 22, n. 7, p. 1235, doi. 10.1038/mt.2014.95
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- Publication type:
- Article
4444 The effect of early life antibiotics on gut microbiome and fecal bile acid concentrations in children.
- Published in:
- 2020
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- Publication type:
- Abstract
Upper Respiratory Dysbiosis with a Facultative-dominated Ecotype in Advanced Lung Disease and Dynamic Change after Lung Transplant.
- Published in:
- 2019
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- Publication type:
- journal article
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria.
- Published in:
- Nature Communications, 2016, v. 7, n. 3, p. 11078, doi. 10.1038/ncomms11078
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- Publication type:
- Article
Lifestyle and the presence of helminths is associated with gut microbiome composition in Cameroonians.
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- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02020-4
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- Publication type:
- Article
A New Class of Multimerization Selective Inhibitors of HIV-1 Integrase.
- Published in:
- PLoS Pathogens, 2014, v. 10, n. 5, p. 1, doi. 10.1371/journal.ppat.1004171
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- Publication type:
- Article
The Major Cellular Sterol Regulatory Pathway Is Required for Andes Virus Infection.
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- PLoS Pathogens, 2014, v. 10, n. 2, p. 1, doi. 10.1371/journal.ppat.1003911
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- Publication type:
- Article
Directly Infected Resting CD4+T Cells Can Produce HIV Gag without Spreading Infection in a Model of HIV Latency.
- Published in:
- PLoS Pathogens, 2012, v. 8, n. 7, p. 1, doi. 10.1371/journal.ppat.1002818
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- Publication type:
- Article
LEDGF/p75-Independent HIV-1 Replication Demonstrates a Role for HRP-2 and Remains Sensitive to Inhibition by LEDGINs.
- Published in:
- PLoS Pathogens, 2012, v. 8, n. 3, p. 1, doi. 10.1371/journal.ppat.1002558
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- Publication type:
- Article
HIV-1 Capsid-Cyclophilin Interactions Determine Nuclear Import Pathway, Integration Targeting and Replication Efficiency.
- Published in:
- PLoS Pathogens, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.ppat.1002439
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- Publication type:
- Article
Modeling HIV-1 integrase complexes based on their hydrodynamic properties.
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- Biopolymers, 2003, v. 68, n. 1, p. 110, doi. 10.1002/bip.10217
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- Publication type:
- Article
In vivo genome editing restores haemostasis in a mouse model of haemophilia.
- Published in:
- Nature, 2011, v. 475, n. 7355, p. 217, doi. 10.1038/nature10177
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- Publication type:
- Article
Structure-constrained sparse canonical correlation analysis with an application to microbiome data analysis.
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- Biostatistics, 2013, v. 14, n. 2, p. 244, doi. 10.1093/biostatistics/kxs038
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- Publication type:
- Article
Viral communities of the human gut: metagenomic analysis of composition and dynamics.
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- Mobile DNA, 2017, v. 8, p. 1, doi. 10.1186/s13100-017-0095-y
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- Publication type:
- Article
Gene activity in primary T cells infected with HIV<sub>89.6</sub>: intron retention and induction of genomic repeats.
- Published in:
- Retrovirology, 2015, v. 12, n. 1, p. 1, doi. 10.1186/s12977-015-0205-1
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- Publication type:
- Article
Bromodomain and extra-terminal (BET) proteins target Moloney murine leukemia virus integration to transcription start sites.
- Published in:
- 2013
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- Publication type:
- Abstract
HIV latency and integration site placement in five cell-based models.
- Published in:
- Retrovirology, 2013, v. 10, n. 1, p. 1, doi. 10.1186/1742-4690-10-90
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- Publication type:
- Article
HRP-2 determines HIV-1 integration site selection in LEDGF/p75 depleted cells.
- Published in:
- Retrovirology, 2012, v. 9, n. 1, p. 84, doi. 10.1186/1742-4690-9-84
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- Publication type:
- Article
HTLV-1 clonality during chronic infection and BLV clonality during primary infection.
- Published in:
- 2011
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- Publication type:
- Abstract
Sampling and pyrosequencing methods for characterizing bacterial communities in the human guy using 16S sequence tags.
- Published in:
- BMC Microbiology, 2010, v. 10, p. 206, doi. 10.1186/1471-2180-10-206
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- Publication type:
- Article
Distribution of Lentiviral Vector Integration Sites in Mice Following Therapeutic Gene Transfer to Treat β-thalassemia.
- Published in:
- Molecular Therapy, 2011, v. 19, n. 7, p. 1273, doi. 10.1038/mt.2011.20
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- Publication type:
- Article
Nondividing Cells: A Safer Bet for Integrating Vectors?
- Published in:
- 2011
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- Publication type:
- Opinion
HIV Sequence Variation Associated With env Antisense Adoptive T-cell Therapy in the hNSG Mouse Model.
- Published in:
- Molecular Therapy, 2010, v. 18, n. 4, p. 803, doi. 10.1038/mt.2009.316
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- Publication type:
- Article
LEDGF Hybrids Efficiently Retarget Lentiviral Integration Into Heterochromatin.
- Published in:
- Molecular Therapy, 2010, v. 18, n. 3, p. 552, doi. 10.1038/mt.2010.36
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- Publication type:
- Article
Analysis of Lentiviral Vector Integration in HIV+ Study Subjects Receiving Autologous Infusions of Gene Modified CD4+ T Cells.
- Published in:
- Molecular Therapy, 2009, v. 17, n. 5, p. 844, doi. 10.1038/mt.2009.16
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- Publication type:
- Article
HIV Integration Site Selection: Targeting in Macrophages and the Effects of Different Routes of Viral Entry.
- Published in:
- Molecular Therapy, 2006, v. 14, n. 2, p. 218, doi. 10.1016/j.ymthe.2006.03.012
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- Publication type:
- Article
Integration Site Selection by HIV-Based Vectors in Dividing and Growth-Arrested IMR-90 Lung Fibroblasts.
- Published in:
- Molecular Therapy, 2006, v. 13, n. 2, p. 366, doi. 10.1016/j.ymthe.2005.10.009
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- Publication type:
- Article
Bidirectional interactions between indomethacin and the murine intestinal microbiota.
- Published in:
- eLife, 2015, p. 1, doi. 10.7554/eLife.08973
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- Publication type:
- Article
Tracking gut microbiome and bloodstream infection in critically ill adults.
- Published in:
- PLoS ONE, 2023, v. 18, n. 10, p. 1, doi. 10.1371/journal.pone.0289923
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- Publication type:
- Article
Genomic safe harbors permit high β-globin transgene expression in thalassemia induced pluripotent stem cells.
- Published in:
- Nature Biotechnology, 2011, v. 29, n. 1, p. 73, doi. 10.1038/nbt.1717
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- Publication type:
- Article
Integration complexes derived from HIV vectors for rapid assays in vitro.
- Published in:
- Nature Biotechnology, 1999, v. 17, n. 6, p. 578, doi. 10.1038/9886
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- Publication type:
- Article
Correction: LEDGF/p75-Independent HIV-1 Replication Demonstrates a Role for HRP-2 and Remains Sensitive to Inhibition by LEDGINs.
- Published in:
- 2020
- By:
- Publication type:
- Correction Notice
Selection of Target Sites for Mobile DNA Integration in the Human Genome.
- Published in:
- PLoS Computational Biology, 2006, v. 2, n. 11, p. 1450, doi. 10.1371/journal.pcbi.0020157
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- Publication type:
- Article
Ethylation interference and X-ray crystallography identify similar interactions between 434 repressor and operator.
- Published in:
- Nature, 1985, v. 316, n. 6029, p. 651, doi. 10.1038/316651a0
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- Publication type:
- Article
grabseqs: simple downloading of reads and metadata from multiple next-generation sequencing data repositories.
- Published in:
- Bioinformatics, 2020, v. 36, n. 11, p. 3607, doi. 10.1093/bioinformatics/btaa167
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- Publication type:
- Article
Population structure of human gut bacteria in a diverse cohort from rural Tanzania and Botswana.
- Published in:
- Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1616-9
- By:
- Publication type:
- Article
iGUIDE: an improved pipeline for analyzing CRISPR cleavage specificity.
- Published in:
- Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1625-3
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- Publication type:
- Article
Fungi of the Murine Gut: Episodic Variation and Proliferation during Antibiotic Treatment.
- Published in:
- PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0071806
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- Publication type:
- Article