Works by Burki, Fabien

Results: 41
    1

    The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing.

    Published in:
    PLoS Biology, 2014, v. 12, n. 6, p. 1, doi. 10.1371/journal.pbio.1001889
    By:
    • Keeling, Patrick J.;
    • Burki, Fabien;
    • Wilcox, Heather M.;
    • Allam, Bassem;
    • Allen, Eric E.;
    • Amaral-Zettler, Linda A.;
    • Armbrust, E. Virginia;
    • Archibald, John M.;
    • Bharti, Arvind K.;
    • Bell, Callum J.;
    • Beszteri, Bank;
    • Bidle, Kay D.;
    • Cameron, Connor T.;
    • Campbell, Lisa;
    • Caron, David A.;
    • Cattolico, Rose Ann;
    • Collier, Jackie L.;
    • Coyne, Kathryn;
    • Davy, Simon K.;
    • Deschamps, Phillipe
    Publication type:
    Article
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    Single cell genomics reveals plastid-lacking Picozoa are close relatives of red algae.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26918-0
    By:
    • Schön, Max E.;
    • Zlatogursky, Vasily V.;
    • Singh, Rohan P.;
    • Poirier, Camille;
    • Wilken, Susanne;
    • Mathur, Varsha;
    • Strassert, Jürgen F. H.;
    • Pinhassi, Jarone;
    • Worden, Alexandra Z.;
    • Keeling, Patrick J.;
    • Ettema, Thijs J. G.;
    • Wideman, Jeremy G.;
    • Burki, Fabien
    Publication type:
    Article
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    Evolutionary Origins of Rhizarian Parasites.

    Published in:
    Molecular Biology & Evolution, 2016, v. 33, n. 4, p. 980, doi. 10.1093/molbev/msv340
    By:
    • Sierra, Roberto;
    • Cañas-Duarte, Silvia J.;
    • Burki, Fabien;
    • Schwelm, Arne;
    • Fogelqvist, Johan;
    • Dixelius, Christina;
    • González-García,, Laura N.;
    • Gile, Gillian H.;
    • Slamovits, Claudio H.;
    • Klopp, Christophe;
    • Restrepo, Silvia;
    • Arzul, Isabelle;
    • Pawlowski, Jan
    Publication type:
    Article
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    Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates.

    Published in:
    ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2018, v. 12, n. 1, p. 304, doi. 10.1038/ismej.2017.167
    By:
    • Strassert, Jürgen F H;
    • Karnkowska, Anna;
    • Hehenberger, Elisabeth;
    • del Campo, Javier;
    • Kolisko, Martin;
    • Okamoto, Noriko;
    • Burki, Fabien;
    • Janouškovec, Jan;
    • Poirier, Camille;
    • Leonard, Guy;
    • Hallam, Steven J;
    • Richards, Thomas A;
    • Worden, Alexandra Z;
    • Santoro, Alyson E;
    • Keeling, Patrick J
    Publication type:
    Article
    19

    PhyloFisher: A phylogenomic package for resolving eukaryotic relationships.

    Published in:
    PLoS Biology, 2021, v. 19, n. 8, p. 1, doi. 10.1371/journal.pbio.3001365
    By:
    • Tice, Alexander K.;
    • Žihala, David;
    • Pánek, Tomáš;
    • Jones, Robert E.;
    • Salomaki, Eric D.;
    • Nenarokov, Serafim;
    • Burki, Fabien;
    • Eliáš, Marek;
    • Eme, Laura;
    • Roger, Andrew J.;
    • Rokas, Antonis;
    • Shen, Xing-Xing;
    • Strassert, Jürgen F. H.;
    • Kolísko, Martin;
    • Brown, Matthew W.
    Publication type:
    Article
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    A letter to Denis Lynn.

    Published in:
    Aquatic Ecosystem Health & Management, 2020, v. 23, n. 1, p. 17, doi. 10.1080/14634988.2020.1717827
    By:
    • Keeling, Patrick J.;
    • Boscaro, Vittorio;
    • Bardell, Floyd;
    • Burki, Fabien;
    • Cho, Anna;
    • Cooney, Elizabeth C.;
    • del Campo, Javier;
    • Fast, Naomi M.;
    • Fiorito, Rebecca;
    • Gavelis, Greg S.;
    • Gawryluk, Ryan M. R.;
    • George, Emma E.;
    • Gomm-Kolisko, Rachael N.;
    • Grisdale, Cameron J.;
    • Heger, Thierry;
    • Hehenberger, Elisabeth;
    • Herranz, Maria;
    • Hirakawa, Yoshihisa;
    • Husnik, Filip;
    • Imanian, Behzad
    Publication type:
    Article
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    Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes.

    Published in:
    Journal of Eukaryotic Microbiology, 2019, v. 66, n. 1, p. 4, doi. 10.1111/jeu.12691
    By:
    • Adl, Sina M.;
    • Bass, David;
    • Lane, Christopher E.;
    • Lukeš, Julius;
    • Schoch, Conrad L.;
    • Smirnov, Alexey;
    • Agatha, Sabine;
    • Berney, Cedric;
    • Brown, Matthew W.;
    • Burki, Fabien;
    • Cárdenas, Paco;
    • Čepička, Ivan;
    • Chistyakova, Lyudmila;
    • Campo, Javier;
    • Dunthorn, Micah;
    • Edvardsen, Bente;
    • Eglit, Yana;
    • Guillou, Laure;
    • Hampl, Vladimír;
    • Heiss, Aaron A.
    Publication type:
    Article
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    The Revised Classification of Eukaryotes.

    Published in:
    Journal of Eukaryotic Microbiology, 2012, v. 59, n. 5, p. 429, doi. 10.1111/j.1550-7408.2012.00644.x
    By:
    • Adl, Sina M.;
    • Simpson, Alastair G. B.;
    • Lane, Christopher E.;
    • Lukeš, Julius;
    • Bass, David;
    • Bowser, Samuel S.;
    • Brown, Matthew W.;
    • Burki, Fabien;
    • Dunthorn, Micah;
    • Hampl, Vladimir;
    • Heiss, Aaron;
    • Hoppenrath, Mona;
    • Lara, Enrique;
    • le Gall, Line;
    • Lynn, Denis H.;
    • McManus, Hilary;
    • Mitchell, Edward A. D.;
    • Mozley-Stanridge, Sharon E.;
    • Parfrey, Laura W.;
    • Pawlowski, Jan
    Publication type:
    Article
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    Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs.

    Published in:
    Nature, 2012, v. 492, n. 7427, p. 59, doi. 10.1038/nature11681
    By:
    • Curtis, Bruce A.;
    • Tanifuji, Goro;
    • Burki, Fabien;
    • Gruber, Ansgar;
    • Irimia, Manuel;
    • Maruyama, Shinichiro;
    • Arias, Maria C.;
    • Ball, Steven G.;
    • Gile, Gillian H.;
    • Hirakawa, Yoshihisa;
    • Hopkins, Julia F.;
    • Kuo, Alan;
    • Rensing, Stefan A.;
    • Schmutz, Jeremy;
    • Symeonidi, Aikaterini;
    • Elias, Marek;
    • Eveleigh, Robert J. M.;
    • Herman, Emily K.;
    • Klute, Mary J.;
    • Nakayama, Takuro
    Publication type:
    Article
    38

    Large-Scale Phylogenomic Analyses Reveal That Two Enigmatic Protist Lineages, Telonemia and Centroheliozoa, Are Related to Photosynthetic Chromalveolates.

    Published in:
    Genome Biology & Evolution, 2009, v. 1, p. 231, doi. 10.1093/gbe/evp022
    By:
    • Burki, Fabien;
    • Inagaki, Yuji;
    • Bråte, Jon;
    • Archibald, John M.;
    • Keeling, Patrick J.;
    • Cavalier-Smith, Thomas;
    • Sakaguchi, Miako;
    • Hashimoto, Tetsuo;
    • Horak, Ales;
    • Kumar, Surendra;
    • Klaveness, Dag;
    • Jakobsen, Kjetill S.;
    • Pawlowski, Jan;
    • Shalchian-Tabrizi, Kamran
    Publication type:
    Article
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    Contrasting outcomes of genome reduction in mikrocytids and microsporidians.

    Published in:
    BMC Biology, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12915-023-01635-w
    By:
    • Žárský, Vojtečh;
    • Karnkowska, Anna;
    • Boscaro, Vittorio;
    • Trznadel, Morelia;
    • Whelan, Thomas A.;
    • Hiltunen-Thorén, Markus;
    • Onut-Brännström, Ioana;
    • Abbott, Cathryn L.;
    • Fast, Naomi M.;
    • Burki, Fabien;
    • Keeling, Patrick J.
    Publication type:
    Article