Works by Burgers, Peter M

Results: 42

Low-fidelity DNA synthesis by the L979F mutator derivative of Saccharomyces cerevisiae DNA polymerase ζ.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 11, p. 3774, doi. 10.1093/nar/gkp238

By:

Stone, Jana E.;
Kissling, Grace E.;
Lujan, Scott A.;
Rogozin, Igor B.;
Stith, Carrie M.;
Burgers, Peter M. J.;
Kunkel, Thomas A.

Publication type:

Article

The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 9, p. 2830, doi. 10.1093/nar/gkp103

By:

McCulloch, Scott D.;
Kokoska, Robert J.;
Garg, Parie;
Burgers, Peter M.;
Kunkel, Thomas A.

Publication type:

Article

Contributions of the two accessory subunits, RNASEH2B and RNASEH2C, to the activity and properties of the human RNase H2 complex.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 1, p. 96, doi. 10.1093/nar/gkn913

By:

Chon, Hyongi;
Vassilev, Alex;
DePamphilis, Melvin L.;
Zhao, Yingming;
Zhang, Junmei;
Burgers, Peter M.;
Crouch, Robert J.;
Cerritelli, Susana M.

Publication type:

Article

Partial reconstitution of DNA large loop repair with purified proteins from Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4699, doi. 10.1093/nar/gkn446

By:

Sommer, Debbie;
Stith, Carrie M.;
Burgers, Peter M. J.;
Lahue, Robert S.

Publication type:

Article

Uracil recognition by replicative DNA polymerases is limited to the archaea, not occurring with bacteria and eukarya.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 3, p. 705, doi. 10.1093/nar/gkm1023

By:

Wardle, Josephine;
Burgers, Peter M. J.;
Cann, Isaac K. O.;
Darley, Kate;
Heslop, Pauline;
Johansson, Erik;
Lin, Li-Jung;
McGlynn, Peter;
Sanvoisin, Jonathan;
Stith, Carrie M.;
Connolly, Bernard A.

Publication type:

Article

The eukaryotic leading and lagging strand DNA polymerases are loaded onto primer-ends via separate mechanisms but have comparable processivity in the presence of PCNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6588, doi. 10.1093/nar/gkm741

By:

Chilkova, Olga;
Stenlund, Peter;
Isoz, Isabelle;
Stith, Carrie M.;
Grabowski, Pawel;
Lundström, Else-Britt;
Burgers, Peter M.;
Johansson, Erik

Publication type:

Article

The fidelity of DNA synthesis by yeast DNA polymerase zeta alone and with accessory proteins.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4731, doi. 10.1093/nar/gkl465

By:

Zhong, Xuejun;
Garg, Parie;
Stith, Carrie M.;
McElhinny, Stephanie A. Nick;
Kissling, Grace E.;
Burgers, Peter M. J.;
Kunkel, Thomas A.

Publication type:

Article

RPA and PCNA suppress formation of large deletion errors by yeast DNA polymerase δ.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 16, p. 4335, doi. 10.1093/nar/gkl403

By:

Fortune, John M.;
Stith, Carrie M.;
Kissling, Grace E.;
Burgers, Peter M. J.;
Kunkel, Thomas A.

Publication type:

Article

DNA polymerase δ, RFC and PCNA are required for repair synthesis of large looped heteroduplexes in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2004, v. 32, n. 21, p. 6268, doi. 10.1093/nar/gkh965

By:

Corrette-Bennett, Stephanie E.;
Borgeson, Claudia;
Sommer, Debbie;
Burgers, Peter M. J.;
Lahue, Robert S.

Publication type:

Article

Enzymatic switching for efficient and accurate translesion DNA replication.

Published in:

Nucleic Acids Research, 2004, v. 32, n. 15, p. 4665, doi. 10.1093/nar/gkh777

By:

McCulloch, Scott D.;
Kokoska, Robert J.;
Chilkova, Olga;
Welch, Carrie M.;
Johansson, Erik;
Burgers, Peter M. J.;
Kunkel, Thomas A.

Publication type:

Article

How the Cell Deals with DNA Nicks.

Published in:

Cell Cycle, 2005, v. 4, n. 2, p. 221, doi. 10.4161/cc.4.2.1418

By:

Garg, Parie;
Burgers, Peter M. J.

Publication type:

Article

Error-free and mutagenic processing of topoisomerase 1-provoked damage at genomic ribonucleotides.

Published in:

EMBO Journal, 2015, v. 34, n. 9, p. 1259, doi. 10.15252/embj.201490868

By:

Sparks, Justin L;
Burgers, Peter M

Publication type:

Article

A novel function of DNA polymerase ζ regulated by PCNA.

Published in:

EMBO Journal, 2006, v. 25, n. 18, p. 4316, doi. 10.1038/sj.emboj.7601320

By:

Northam, Matthew R.;
Garg, Parie;
Baitin, Dmitri M.;
Burgers, Peter M. J.;
Shcherbakova, Polina V.

Publication type:

Article

Evidence that processing of ribonucleotides in DNA by topoisomerase 1 is leading-strand specific.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 4, p. 291, doi. 10.1038/nsmb.2989

By:

Williams, Jessica S;
Clausen, Anders R;
Lujan, Scott A;
Marjavaara, Lisette;
Clark, Alan B;
Burgers, Peter M;
Chabes, Andrei;
Kunkel, Thomas A

Publication type:

Article

Delivering nonidentical twins.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 8, p. 649, doi. 10.1038/nsmb.2852

By:

Kunkel, Thomas A;
Burgers, Peter M

Publication type:

Article

Molecular basis of aflatoxin-induced mutagenesis—role of the aflatoxin B1-formamidopyrimidine adduct.

Published in:

Carcinogenesis, 2014, v. 35, n. 7, p. 1461, doi. 10.1093/carcin/bgu003

By:

Lin, Ying-Chih;
Li, Liang;
Makarova, Alena V.;
Burgers, Peter M.;
Stone, Michael P.;
Lloyd, R. Stephen

Publication type:

Article

Modeling cancer genomic data in yeast reveals selection against ATM function during tumorigenesis.

Published in:

PLoS Genetics, 2020, v. 16, n. 3, p. 1, doi. 10.1371/journal.pgen.1008422

By:

Hohl, Marcel;
Mojumdar, Aditya;
Hailemariam, Sarem;
Kuryavyi, Vitaly;
Ghisays, Fiorella;
Sorenson, Kyle;
Chang, Matthew;
Taylor, Barry S.;
Patel, Dinshaw J.;
Burgers, Peter M.;
Cobb, Jennifer A.;
Petrini, John H. J.

Publication type:

Article

Arranging eukaryotic nuclear DNA polymerases for replication.

Published in:

BioEssays, 2017, v. 39, n. 8, p. n/a, doi. 10.1002/bies.201700070

By:

Kunkel, Thomas A.;
Burgers, Peter M. J.

Publication type:

Article

Processing of Branched DNA Intermediates by a Complex of Human FEN-1 and PCNA.

Published in:

Nucleic Acids Research, 1996, v. 24, n. 11, p. 2036

By:

Wu, Xiantuo;
Li, Jun;
Li, Xiangyang;
Hsieh, Chih-Lin;
Burgers, Peter M. J.;
Lieber, Michael R.

Publication type:

Article

Two modes of FEN1 binding to PCNA regulated by DNA.

Published in:

EMBO Journal, 2000, v. 19, n. 14, p. 3811, doi. 10.1093/emboj/19.14.3811

By:

Gomes, Xavier V.;
Burgers, Peter M. J.

Publication type:

Article

The fidelity of DNA replication, particularly on GC-rich templates, is reduced by defects of the Fe–S cluster in DNA polymerase δ.

Published in:

Nucleic Acids Research, 2021, v. 49, n. 10, p. 5623, doi. 10.1093/nar/gkab371

By:

Kiktev, Denis A;
Dominska, Margaret;
Zhang, Tony;
Dahl, Joseph;
Stepchenkova, Elena I;
Mieczkowski, Piotr;
Burgers, Peter M;
Lujan, Scott;
Burkholder, Adam;
Kunkel, Thomas A;
Petes, Thomas D

Publication type:

Article

Bypass of DNA interstrand crosslinks by a Rev1–DNA polymerase ζ complex.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 15, p. 8461, doi. 10.1093/nar/gkaa580

By:

Bezalel-Buch, Rachel;
Cheun, Young K;
Roy, Upasana;
Schärer, Orlando D;
Burgers, Peter M

Publication type:

Article

Complementary roles of Pif1 helicase and single stranded DNA binding proteins in stimulating DNA replication through G-quadruplexes.

Published in:

Nucleic Acids Research, 2019, v. 47, n. 16, p. 8595, doi. 10.1093/nar/gkz608

By:

Sparks, Melanie A;
Singh, Saurabh P;
Burgers, Peter M;
Galletto, Roberto

Publication type:

Article

PCNA accelerates the nucleotide incorporation rate by DNA polymerase δ.

Published in:

Nucleic Acids Research, 2019, v. 47, n. 4, p. 1977, doi. 10.1093/nar/gky1321

By:

Mondol, Tanumoy;
Stodola, Joseph L;
Galletto, Roberto;
Burgers, Peter M

Publication type:

Article

Yeast DNA polymerase ζ maintains consistent activity and mutagenicity across a wide range of physiological dNTP concentrations.

Published in:

Nucleic Acids Research, 2017, v. 45, n. 3, p. 1200, doi. 10.1093/nar/gkw1149

By:

Kochenova, Olga V.;
Bezalel-Buch, Rachel;
Tran, Phong;
Makarova, Alena V.;
Chabes, Andrei;
Burgers, Peter M. J.;
Shcherbakova, Polina V.

Publication type:

Article

Parallel analysis of ribonucleotide-dependent deletions produced by yeast Top1 in vitro and in vivo.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 16, p. 7714, doi. 10.1093/nar/gkw495

By:

Jang-Eun Cho;
Huang, Shar-yin N.;
Burgers, Peter M.;
Shuman, Stewart;
Pommier, Yves;
Jinks-Robertson, Sue

Publication type:

Article

Pif1 removes a Rap1-dependent barrier to the strand displacement activity of DNA polymerase δ.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 8, p. 3811, doi. 10.1093/nar/gkw181

By:

Koc, Katrina N.;
Singh, Saurabh P.;
Stodola, Joseph L.;
Burgers, Peter M.;
Galletto, Roberto

Publication type:

Article

Regulation of yeast DNA polymerase δ-mediated strand displacement synthesis by 5'-flaps.

Published in:

Nucleic Acids Research, 2015, v. 43, n. 8, p. 4179, doi. 10.1093/nar/gkv260

By:

Koc, Katrina N.;
Stodola, Joseph L.;
Burgers, Peter M.;
Galletto, Roberto

Publication type:

Article

DNA polymerases ζ and Rev1 mediate error-prone bypass of non-B DNA structures.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 1, p. 290, doi. 10.1093/nar/gkt830

By:

Northam, Matthew R.;
Moore, Elizabeth A.;
Mertz, Tony M.;
Binz, Sara K.;
Stith, Carrie M.;
Stepchenkova, Elena I.;
Wendt, Kathern L.;
Burgers, Peter M. J.;
Shcherbakova, Polina V.

Publication type:

Article

RNase H2 roles in genome integrity revealed by unlinking its activities.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 5, p. 3130, doi. 10.1093/nar/gkt027

By:

Chon, Hyongi;
Sparks, Justin L.;
Rychlik, Monika;
Nowotny, Marcin;
Burgers, Peter M.;
Crouch, Robert J.;
Cerritelli, Susana M.

Publication type:

Article

A four-subunit DNA polymerase ζ complex containing Pol δ accessory subunits is essential for PCNA-mediated mutagenesis.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 22, p. 11618, doi. 10.1093/nar/gks948

By:

Makarova, Alena V.;
Stodola, Joseph L.;
Burgers, Peter M.

Publication type:

Article

Oxidative DNA damage stalls the human mitochondrial replisome.

Published in:

Scientific Reports, 2016, p. 28942, doi. 10.1038/srep28942

By:

Stojkovič, Gorazd;
Makarova, Alena V.;
Wanrooij, Paulina H.;
Forslund, Josefin;
Burgers, Peter M.;
Wanrooij, Sjoerd

Publication type:

Article

DNA polymerase zeta can efficiently replicate structures formed by AT/TA repeat sequences and prevent their deletion.

Published in:

Nucleic Acids Research, 2025, v. 53, n. 3, p. 1, doi. 10.1093/nar/gkae1254

By:

Das, Mili;
Hile, Suzanne E;
Brewster, Jennifer;
Boer, Jan Leendert;
Bezalel-Buch, Rachel;
Guo, Qiong;
Yang, Wei;
Burgers, Peter M;
Eckert, Kristin A;
Freudenreich, Catherine H

Publication type:

Article

Eukaryotic DNA polymerases require an iron-sulfur cluster for the formation of active complexes.

Published in:

Nature Chemical Biology, 2012, v. 8, n. 1, p. 125, doi. 10.1038/nchembio.721

By:

Netz, Daili J A;
Stith, Carrie M;
Stümpfig, Martin;
Köpf, Gabriele;
Vogel, Daniel;
Genau, Heide M;
Stodola, Joseph L;
Lill, Roland;
Burgers, Peter M J;
Pierik, Antonio J

Publication type:

Article

Yeast Exonuclease 5 Is Essential for Mitochondrial Genome Maintenance.

Published in:

Molecular & Cellular Biology, 2010, v. 30, n. 6, p. 13, doi. 10.1128/MCB.01321-09

By:

Burgers, Peter M.;
Stith, Carrie M.;
Yoder, Bonita L.;
Sparks, Justin L.

Publication type:

Article

Replication Protein A-Directed Unloading of PCNA by the Ctf18 Cohesion Establishment Complex.

Published in:

Molecular & Cellular Biology, 2005, v. 25, n. 13, p. 5445, doi. 10.1128/MCB.25.13.5445-5455.2005

By:

Bylund, Göran O.;
Burgers, Peter M. J.

Publication type:

Article

Pre-Steady-State Kinetic Analysis of Truncated and Full-Length Saccharomyces cerevisiae DNA Polymerase Eta.

Published in:

Journal of Nucleic Acids, 2010, p. 1, doi. 10.4061/2010/871939

By:

Brown, Jessica A.;
Likui Zhang;
Sherrer, Shanen M.;
Taylor, John-Stephen;
Burgers, Peter M. J.;
Suo, Zucai

Publication type:

Article

It's all about flaps: Dna2 and checkpoint activation.

Published in:

Cell Cycle, 2011, v. 10, n. 15, p. 2417, doi. 10.4161/cc.10.15.15851

By:

Burgers, Peter M.

Publication type:

Article

Clamping the Mec1/ATR Checkpoint Kinase into Action.

Published in:

Cell Cycle, 2007, v. 6, n. 10, p. 1157, doi. 10.4161/cc.6.10.4221

By:

Majka, Jerzy;
Burgers, Peter M. J.

Publication type:

Article

Molecular mechanisms underlying aflatoxin‐induced mutagenesis.

Published in:

FASEB Journal, 2013, v. 27, p. lb78, doi. 10.1096/fasebj.27.1_supplement.lb78

By:

Lin, Ying‐Chih;
Li, Liang;
Burgers, Peter M.;
Stone, Michael P.;
Lloyd, R. Stephen

Publication type:

Article

Novel insights into the mechanism of cell cycle kinases Mec1(ATR) and Tel1(ATM).

Published in:

Critical Reviews in Biochemistry & Molecular Biology, 2021, v. 56, n. 5, p. 441, doi. 10.1080/10409238.2021.1925218

By:

Tannous, Elias A.;
Burgers, Peter M.

Publication type:

Article

DNA Polymerases that Propagate the Eukaryotic DNA Replication Fork.

Published in:

Critical Reviews in Biochemistry & Molecular Biology, 2005, v. 40, n. 2, p. 115, doi. 10.1080/10409230590935433

By:

Garg, Parie;
Burgers, Peter M. J.

Publication type:

Article