Works by Brettin, Thomas

Results: 44

Enhanced Co-Expression Extrapolation (COXEN) Gene Selection Method for Building Anti-Cancer Drug Response Prediction Models.

Published in:

Genes, 2020, v. 11, n. 9, p. 1070, doi. 10.3390/genes11091070

By:

Zhu, Yitan;
Brettin, Thomas;
Evrard, Yvonne A.;
Xia, Fangfang;
Partin, Alexander;
Shukla, Maulik;
Yoo, Hyunseung;
Doroshow, James H.;
Stevens, Rick L.

Publication type:

Article

Genomics of an extreme psychrophile, Psychromonas ingrahamii.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-210

By:

Riley, Monica;
Staley, James T.;
Danchin, Antoine;
Ting Zhang Wang;
Brettin, Thomas S.;
Hauser, Loren J.;
Land, Miriam L.;
Thompson, Linda S.

Publication type:

Article

Molecular Evolutionary Consequences of Niche Restriction in Francisella tularensis, a Facultative Intracellular Pathogen.

Published in:

PLoS Pathogens, 2009, v. 5, n. 6, p. 1, doi. 10.1371/journal.ppat.1000472

By:

Larsson, Pär;
Elfsmark, Daniel;
Svensson, Kerstin;
Wikström, Per;
Forsman, Mats;
Brettin, Thomas;
Keim, Paul;
Johansson, Anders

Publication type:

Article

SVDMAN--singular value decomposition analysis of microarray data.

Published in:

Bioinformatics, 2001, v. 17, n. 6, p. 566, doi. 10.1093/bioinformatics/17.6.566

By:

Wall, Michael E.;
Dyck, Patricia A.;
Brettin, Thomas S.

Publication type:

Article

Publisher Correction: Converting tabular data into images for deep learning with convolutional neural networks.

Published in:

2021

By:

Zhu, Yitan;
Brettin, Thomas;
Xia, Fangfang;
Partin, Alexander;
Shukla, Maulik;
Yoo, Hyunseung;
Evrard, Yvonne A.;
Doroshow, James H.;
Stevens, Rick L.

Publication type:

Correction Notice

Detection of <i>Bacillus anthracis</i> DNA in Complex Soil and Air Samples Using Next-Generation Sequencing.

Published in:

PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0073455

By:

Be, Nicholas A.;
Thissen, James B.;
Gardner, Shea N.;
McLoughlin, Kevin S.;
Fofanov, Viacheslav Y.;
Koshinsky, Heather;
Ellingson, Sally R.;
Brettin, Thomas S.;
Jackson, Paul J.;
Jaing, Crystal J.

Publication type:

Article

The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation.

Published in:

PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0048837

By:

Mavromatis, Konstantinos;
Land, Miriam L.;
Brettin, Thomas S.;
Quest, Daniel J.;
Copeland, Alex;
Clum, Alicia;
Goodwin, Lynne;
Woyke, Tanja;
Lapidus, Alla;
Klenk, Hans Peter;
Cottingham, Robert W.;
Kyrpides, Nikos C.

Publication type:

Article

Large Direct Repeats Flank Genomic Rearrangements between a New Clinical Isolate of Francisella tularensis subsp. tularensis A1 and Schu S4.

Published in:

PLoS ONE, 2010, v. 5, n. 2, p. 1, doi. 10.1371/journal.pone.0009007

By:

Nalbantoglu, Ufuk;
Sayood, Khalid;
Dempsey, Michael P.;
Iwen, Peter C.;
Francesconi, Stephen C.;
Barabote, Ravi D.;
Gary Xie;
Brettin, Thomas S.;
Hinrichs, Steven H.;
Fey, Paul D.

Publication type:

Article

Complete Genome Sequence of Francisella tularensis Subspecies holarctica FTNF002-00.

Published in:

PLoS ONE, 2009, v. 4, n. 9, p. 1, doi. 10.1371/journal.pone.0007041

By:

Barabote, Ravi D.;
Xie, Gary;
Brettin, Thomas S.;
Hinrichs, Steven H.;
Fey, Paul D.;
Jay, Justin J.;
Engle, Jennifer L.;
Godbole, Shubhada D.;
Noronha, Jyothi M.;
Scheuermann, Richard H.;
Zhou, Liwei W.;
Lion, Christine;
Dempsey, Michael P.

Publication type:

Article

Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae.

Published in:

BMC Microbiology, 2010, v. 10, p. 154, doi. 10.1186/1471-2180-10-154

By:

Haley, Bradd J.;
Grim, Christopher J.;
Hasan, Nur A.;
Seon-Young Choi;
Jongsik Chun;
Brettin, Thomas S.;
Bruce, David C.;
Challacombe, Jean F.;
Detter, J. Chris;
Han, Cliff S.;
Huq, Anwar;
Colwell, Rita R.

Publication type:

Article

Expression capable library for studies of Neisseria gonorrhoeae, version 1.0.

Published in:

BMC Microbiology, 2005, v. 5, p. 1, doi. 10.1186/1471-2180-5-50

By:

Brettin, Thomas;
Altherr, Michael R.;
Ying Du;
Mason, Roxie M.;
Friedrich, Alexandra;
Potter, Laura;
Langford, Chris;
Keller, Thomas J.;
Jens, Jason;
Howie, Heather;
Weyand, Nathan J.;
Clary, Susan;
Prichard, Kimberly;
Wachocki, Susi;
Sodergren, Erica;
Dillard, Joseph P.;
Weinstock, George;
So, Magdalene;
Grove Arvidson, Cindy

Publication type:

Article

Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34.

Published in:

Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0194-2

By:

Anderson, Iain J.;
DasSarma, Priya;
Lucas, Susan;
Copeland, Alex;
Lapidus, Alla;
Del Rio, Tijana Glavina;
Tice, Hope;
Dalin, Eileen;
Bruce, David C.;
Goodwin, Lynne;
Pitluck, Sam;
Sims, David;
Brettin, Thomas S.;
Detter, John C.;
Han, Cliff S.;
Larimer, Frank;
Hauser, Loren;
Land, Miriam;
Ivanova, Natalia;
Richardson, Paul

Publication type:

Article

Complete genome sequence of Arthrobacter sp. strain FB24.

Published in:

Standards in Genomic Sciences, 2013, v. 9, n. 1, p. 106, doi. 10.4056/sigs.4438185

By:

Nakatsu, Cindy;
Barabote, Ravi;
Thompson, Sue;
Bruce, David;
Detter, Chris;
Brettin, Thomas;
Han, Cliff;
Beasley, Federico;
Chen, Weimin;
Konopka, Allan;
Xie, Gary

Publication type:

Article

Complete genome sequence of Halorhodospira halophila SL1.

Published in:

Standards in Genomic Sciences, 2013, v. 8, n. 2, p. 206, doi. 10.4056/sigs.3677284

By:

Challacombe, Jean;
Majid, Sophia;
Deole, Ratnakar;
Brettin, Thomas;
Bruce, David;
Delano, Susana;
Detter, John;
Gleasner, Cheryl;
Han, Cliff;
Misra, Monica;
Reitenga, Krista;
Mikhailova, Natalia;
Woyke, Tanja;
Pitluck, Sam;
Nolan, Matt;
Land, Miriam;
Saunders, Elizabeth;
Tapia, Roxanne;
Lapidus, Alla;
Ivanova, Natalia

Publication type:

Article

The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar-contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer.

Published in:

Environmental Microbiology, 2009, v. 11, n. 9, p. 2253, doi. 10.1111/j.1462-2920.2009.01947.x

By:

Yagi, Jane M.;
Sims, David;
Brettin, Thomas;
Bruce, David;
Madsen, Eugene L.

Publication type:

Article

The complete genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum).

Published in:

Environmental Microbiology, 2008, v. 10, n. 10, p. 2550, doi. 10.1111/j.1462-2920.2008.01679.x

By:

Pierce, Elizabeth;
Xie, Gary;
Barabote, Ravi D.;
Saunders, Elizabeth;
Han, Cliff S.;
Detter, John C.;
Richardson, Paul;
Brettin, Thomas S.;
Das, Amaresh;
Ljungdahl, Lars G.;
Ragsdale, Stephen W.

Publication type:

Article

Temperature regulation of virulence factors in the pathogen Vibrio coralliilyticus.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 4, p. 835, doi. 10.1038/ismej.2011.154

By:

Kimes, Nikole E;
Grim, Christopher J;
Johnson, Wesley R;
Hasan, Nur A;
Tall, Ben D;
Kothary, Mahendra H;
Kiss, Hajnalka;
Munk, A Christine;
Tapia, Roxanne;
Green, Lance;
Detter, Chris;
Bruce, David C;
Brettin, Thomas S;
Colwell, Rita R;
Morris, Pamela J

Publication type:

Article

Antimicrobial Resistance Prediction in PATRIC and RAST.

Published in:

Scientific Reports, 2016, p. 27930, doi. 10.1038/srep27930

By:

Davis, James J.;
Boisvert, Sébastien;
Brettin, Thomas;
Kenyon, Ronald W.;
Mao, Chunhong;
Olson, Robert;
Overbeek, Ross;
Santerre, John;
Shukla, Maulik;
Wattam, Alice R.;
Will, Rebecca;
Xia, Fangfang;
Stevens, Rick

Publication type:

Article

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.

Published in:

Scientific Reports, 2015, p. 8365, doi. 10.1038/srep08365

By:

Brettin, Thomas;
Davis, James J.;
Disz, Terry;
Edwards, Robert A.;
Gerdes, Svetlana;
Olsen, Gary J.;
Olson, Robert;
Overbeek, Ross;
Parrello, Bruce;
Pusch, Gordon D.;
Shukla, Maulik;
Thomason, James A.;
Stevens, Rick;
Vonstein, Veronika;
Wattam, Alice R.;
Xia, Fangfang

Publication type:

Article

Data imbalance in drug response prediction: multi-objective optimization approach in deep learning setting.

Published in:

Briefings in Bioinformatics, 2025, v. 26, n. 2, p. 1, doi. 10.1093/bib/bbaf134

By:

Narykov, Oleksandr;
Zhu, Yitan;
Brettin, Thomas;
Evrard, Yvonne A;
Partin, Alexander;
Xia, Fangfang;
Shukla, Maulik;
Vasanthakumari, Priyanka;
Doroshow, James H;
Stevens, Rick L

Publication type:

Article

cross-study analysis of drug response prediction in cancer cell lines.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1093/bib/bbab356

By:

Xia, Fangfang;
Allen, Jonathan;
Balaprakash, Prasanna;
Brettin, Thomas;
Garcia-Cardona, Cristina;
Clyde, Austin;
Cohn, Judith;
Doroshow, James;
Duan, Xiaotian;
Dubinkina, Veronika;
Evrard, Yvonne;
Fan, Ya Ju;
Gans, Jason;
He, Stewart;
Lu, Pinyi;
Maslov, Sergei;
Partin, Alexander;
Shukla, Maulik;
Stahlberg, Eric;
Wozniak, Justin M

Publication type:

Article

genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab313

By:

VanOeffelen, Margo;
Nguyen, Marcus;
Aytan-Aktug, Derya;
Brettin, Thomas;
Dietrich, Emily M;
Kenyon, Ronald W;
Machi, Dustin;
Mao, Chunhong;
Olson, Robert;
Pusch, Gordon D;
Shukla, Maulik;
Stevens, Rick;
Vonstein, Veronika;
Warren, Andrew S;
Wattam, Alice R;
Yoo, Hyunseung;
Davis, James J

Publication type:

Article

PATRIC as a unique resource for studying antimicrobial resistance.

Published in:

Briefings in Bioinformatics, 2019, p. 1094, doi. 10.1093/bib/bbx083

By:

Antonopoulos, Dionysios A;
Assaf, Rida;
Aziz, Ramy Karam;
Brettin, Thomas;
Bun, Christopher;
Conrad, Neal;
Davis, James J;
Dietrich, Emily M;
Disz, Terry;
Gerdes, Svetlana;
Kenyon, Ronald W;
Machi, Dustin;
Mao, Chunhong;
Murphy-Olson, Daniel E;
Nordberg, Eric K;
Olsen, Gary J;
Olson, Robert;
Overbeek, Ross;
Parrello, Bruce;
Pusch, Gordon D

Publication type:

Article

Converting tabular data into images for deep learning with convolutional neural networks.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-90923-y

By:

Zhu, Yitan;
Brettin, Thomas;
Xia, Fangfang;
Partin, Alexander;
Shukla, Maulik;
Yoo, Hyunseung;
Evrard, Yvonne A.;
Doroshow, James H.;
Stevens, Rick L.

Publication type:

Article

Ensemble transfer learning for the prediction of anti-cancer drug response.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-74921-0

By:

Zhu, Yitan;
Brettin, Thomas;
Evrard, Yvonne A.;
Partin, Alexander;
Xia, Fangfang;
Shukla, Maulik;
Yoo, Hyunseung;
Doroshow, James H.;
Stevens, Rick L.

Publication type:

Article

AI Meets Exascale Computing: Advancing Cancer Research With Large-Scale High Performance Computing.

Published in:

Frontiers in Oncology, 2019, p. 1, doi. 10.3389/fonc.2019.00984

By:

Bhattacharya, Tanmoy;
Brettin, Thomas;
Doroshow, James H.;
Evrard, Yvonne A.;
Greenspan, Emily J.;
Gryshuk, Amy L.;
Hoang, Thuc T.;
Lauzon, Carolyn B. Vea;
Nissley, Dwight;
Penberthy, Lynne;
Stahlberg, Eric;
Stevens, Rick;
Streitz, Fred;
Tourassi, Georgia;
Xia, Fangfang;
Zaki, George

Publication type:

Article

A Comprehensive Investigation of Active Learning Strategies for Conducting Anti-Cancer Drug Screening.

Published in:

Cancers, 2024, v. 16, n. 3, p. 530, doi. 10.3390/cancers16030530

By:

Vasanthakumari, Priyanka;
Zhu, Yitan;
Brettin, Thomas;
Partin, Alexander;
Shukla, Maulik;
Xia, Fangfang;
Narykov, Oleksandr;
Weil, Michael Ryan;
Stevens, Rick L.

Publication type:

Article

Integration of Computational Docking into Anti-Cancer Drug Response Prediction Models.

Published in:

Cancers, 2024, v. 16, n. 1, p. 50, doi. 10.3390/cancers16010050

By:

Narykov, Oleksandr;
Zhu, Yitan;
Brettin, Thomas;
Evrard, Yvonne A.;
Partin, Alexander;
Shukla, Maulik;
Xia, Fangfang;
Clyde, Austin;
Vasanthakumari, Priyanka;
Doroshow, James H.;
Stevens, Rick L.

Publication type:

Article

TULIP: An RNA-seq-based Primary Tumor Type Prediction Tool Using Convolutional Neural Networks.

Published in:

Cancer Informatics, 2022, p. 1, doi. 10.1177/11769351221139491

By:

Jones, Sara;
Beyers, Matthew;
Shukla, Maulik;
Xia, Fangfang;
Brettin, Thomas;
Stevens, Rick;
Weil, M Ryan;
Ranganathan Ganakammal, Satishkumar

Publication type:

Article

TULIP: An RNA-seq-based Primary Tumor Type Prediction Tool Using Convolutional Neural Networks.

Published in:

Cancer Informatics, 2022, v. 21, p. 1, doi. 10.1177/11769351221139491

By:

Jones, Sara;
Beyers, Matthew;
Shukla, Maulik;
Fangfang Xia;
Brettin, Thomas;
Stevens, Rick;
Weil, M. Ryan;
Ganakammal, Satishkumar Ranganathan

Publication type:

Article

Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR.

Published in:

Nucleic Acids Research, 2023, v. 51, n. D1, p. D678, doi. 10.1093/nar/gkac1003

By:

Olson, Robert D;
Assaf, Rida;
Brettin, Thomas;
Conrad, Neal;
Cucinell, Clark;
Davis, James J;
Dempsey, Donald M;
Dickerman, Allan;
Dietrich, Emily M;
Kenyon, Ronald W;
Kuscuoglu, Mehmet;
Lefkowitz, Elliot J;
Lu, Jian;
Machi, Dustin;
Macken, Catherine;
Mao, Chunhong;
Niewiadomska, Anna;
Nguyen, Marcus;
Olsen, Gary J;
Overbeek, Jamie C

Publication type:

Article

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D606, doi. 10.1093/nar/gkz943

By:

Davis, James J;
Wattam, Alice R;
Aziz, Ramy K;
Brettin, Thomas;
Butler, Ralph;
Butler, Rory M;
Chlenski, Philippe;
Conrad, Neal;
Dickerman, Allan;
Dietrich, Emily M;
Gabbard, Joseph L;
Gerdes, Svetlana;
Guard, Andrew;
Kenyon, Ronald W;
Machi, Dustin;
Mao, Chunhong;
Murphy-Olson, Dan;
Nguyen, Marcus;
Nordberg, Eric K;
Olsen, Gary J

Publication type:

Article

Scenario driven data modelling: a method for integrating diverse sources of data and data streams.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-12-S10-S17

By:

Griffith, Shelton D.;
Quest, Daniel J.;
Brettin, Thomas S.;
Cottingham, Robert W.

Publication type:

Article

Next generation models for storage and representation of microbial biological annotation.

Published in:

BMC Bioinformatics, 2010, v. 11, p. 1

By:

Quest, Daniel J.;
Land, Miriam L.;
Brettin, Thomas S.;
Cottingham, Robert W.

Publication type:

Article

AI-accelerated protein-ligand docking for SARS-CoV-2 is 100-fold faster with no significant change in detection.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-28785-9

By:

Clyde, Austin;
Liu, Xuefeng;
Brettin, Thomas;
Yoo, Hyunseung;
Partin, Alexander;
Babuji, Yadu;
Blaiszik, Ben;
Mohd-Yusof, Jamaludin;
Merzky, Andre;
Turilli, Matteo;
Jha, Shantenu;
Ramanathan, Arvind;
Stevens, Rick

Publication type:

Article

AI-accelerated protein-ligand docking for SARS-CoV-2 is 100-fold faster with no significant change in detection.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-28785-9

By:

Clyde, Austin;
Liu, Xuefeng;
Brettin, Thomas;
Yoo, Hyunseung;
Partin, Alexander;
Babuji, Yadu;
Blaiszik, Ben;
Mohd-Yusof, Jamaludin;
Merzky, Andre;
Turilli, Matteo;
Jha, Shantenu;
Ramanathan, Arvind;
Stevens, Rick

Publication type:

Article

AI-accelerated protein-ligand docking for SARS-CoV-2 is 100-fold faster with no significant change in detection.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-28785-9

By:

Clyde, Austin;
Liu, Xuefeng;
Brettin, Thomas;
Yoo, Hyunseung;
Partin, Alexander;
Babuji, Yadu;
Blaiszik, Ben;
Mohd-Yusof, Jamaludin;
Merzky, Andre;
Turilli, Matteo;
Jha, Shantenu;
Ramanathan, Arvind;
Stevens, Rick

Publication type:

Article

Predicting tumor cell line response to drug pairs with deep learning.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 71, doi. 10.1186/s12859-018-2509-3

By:

Xia, Fangfang;
Shukla, Maulik;
Brettin, Thomas;
Garcia-Cardona, Cristina;
Cohn, Judith;
Allen, Jonathan E.;
Maslov, Sergei;
Holbeck, Susan L.;
Doroshow, James H.;
Evrard, Yvonne A.;
Stahlberg, Eric A.;
Stevens, Rick L.

Publication type:

Article

CANDLE/Supervisor: a workflow framework for machine learning applied to cancer research.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 59, doi. 10.1186/s12859-018-2508-4

By:

Wozniak, Justin M.;
Jain, Rajeev;
Balaprakash, Prasanna;
Ozik, Jonathan;
Collier, Nicholson T.;
Bauer, John;
Xia, Fangfang;
Brettin, Thomas;
Stevens, Rick;
Mohd-Yusof, Jamaludin;
Cardona, Cristina Garcia;
Essen, Brian Van;
Baughman, Matthew

Publication type:

Article

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.

Published in:

Nucleic Acids Research, 2017, v. 45, n. D1, p. D535, doi. 10.1093/nar/gkw1017

By:

Wattam, Alice R.;
Davis, James J.;
Assaf, Rida;
Boisvert, Sébastien;
Brettin, Thomas;
Bun, Christopher;
Conrad, Neal;
Dietrich, Emily M.;
Disz, Terry;
Gabbard, Joseph L.;
Gerdes, Svetlana;
Henry, Christopher S.;
Kenyon, Ronald W.;
Machi, Dustin;
Chunhong Mao;
Nordberg, Eric K.;
Olsen, Gary J.;
Murphy-Olson, Daniel E.;
Olson, Robert;
Overbeek, Ross

Publication type:

Article

RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics.

Published in:

Nucleic Acids Research, 2012, v. 40, p. W604, doi. 10.1093/nar/gks562

By:

Novichkov, Pavel S.;
Brettin, Thomas S.;
Novichkova, Elena S.;
Dehal, Paramvir S.;
Arkin, Adam P.;
Dubchak, Inna;
Rodionov, Dmitry A.

Publication type:

Article

The pre-seventh pandemic Vibrio cholerae BX 330286 El Tor genome: evidence for the environment as a genome reservoir.

Published in:

Environmental Microbiology Reports, 2010, v. 2, n. 1, p. 208, doi. 10.1111/j.1758-2229.2010.00141.x

By:

Haley, Bradd J.;
Grim, Christopher J.;
Hasan, Nur A.;
Taviani, Elisa;
Chun, Jongsik;
Brettin, Thomas S.;
Bruce, David C.;
Challacombe, Jean F.;
Detter, J. Chris;
Han, Cliff S.;
Huq, Anwar;
Nair, G. Balakrish;
Colwell, Rita R.

Publication type:

Article

KBase: The United States Department of Energy Systems Biology Knowledgebase.

Published in:

Nature Biotechnology, 2018, v. 36, n. 7, p. 566, doi. 10.1038/nbt.4163

By:

Arkin, Adam P;
Cottingham, Robert W;
Henry, Christopher S;
Harris, Nomi L;
Stevens, Rick L;
Maslov, Sergei;
Dehal, Paramvir;
Ware, Doreen;
Perez, Fernando;
Canon, Shane;
Sneddon, Michael W;
Henderson, Matthew L;
Riehl, William J;
Murphy-Olson, Dan;
Chan, Stephen Y;
Kamimura, Roy T;
Kumari, Sunita;
Drake, Meghan M;
Brettin, Thomas S;
Glass, Elizabeth M

Publication type:

Article

Learning curves for drug response prediction in cancer cell lines.

Published in:

BMC Bioinformatics, 2021, v. 22, p. 1, doi. 10.1186/s12859-021-04163-y

By:

Partin, Alexander;
Brettin, Thomas;
Evrard, Yvonne A.;
Zhu, Yitan;
Yoo, Hyunseung;
Xia, Fangfang;
Jiang, Songhao;
Clyde, Austin;
Shukla, Maulik;
Fonstein, Michael;
Doroshow, James H.;
Stevens, Rick L.

Publication type:

Article