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Best practices to evaluate the impact of biomedical research software—metric collection beyond citations.
- Published in:
- Bioinformatics, 2024, v. 40, n. 8, p. 1, doi. 10.1093/bioinformatics/btae469
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- Article
Prostate cancer reshapes the secreted and extracellular vesicle urinary proteomes.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49424-5
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- Publication type:
- Article
PipeVal: light-weight extensible tool for file validation.
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- Bioinformatics, 2024, v. 40, n. 2, p. 1, doi. 10.1093/bioinformatics/btae079
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- Article
NFTest: automated testing of Nextflow pipelines.
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- Bioinformatics, 2024, v. 40, n. 2, p. 1, doi. 10.1093/bioinformatics/btae081
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- Article
Impact of PSMA PET on Prostate Cancer Management.
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- Current Treatment Options in Oncology, 2024, v. 25, n. 2, p. 191, doi. 10.1007/s11864-024-01181-9
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- Publication type:
- Article
HPV‐negative head and neck cancers with adverse pathological features carry specific molecular changes that are associated with survival.
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- Head & Neck, 2024, v. 46, n. 2, p. 353, doi. 10.1002/hed.27591
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- Publication type:
- Article
Increased mRNA expression of CDKN2A is a transcriptomic marker of clinically aggressive meningiomas.
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- Acta Neuropathologica, 2023, v. 146, n. 1, p. 145, doi. 10.1007/s00401-023-02571-3
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- Article
Correction: Increased mRNA expression of CDKN2A is a transcriptomic marker of clinically aggressive meningiomas.
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- 2023
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- Publication type:
- Correction Notice
Drug screening at single-organoid resolution via bioprinting and interferometry.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38832-8
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- Publication type:
- Article
Serrate RNA Effector Molecule (SRRT) Is Associated with Prostate Cancer Progression and Is a Predictor of Poor Prognosis in Lethal Prostate Cancer.
- Published in:
- Cancers, 2023, v. 15, n. 10, p. 2867, doi. 10.3390/cancers15102867
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- Article
Perish and publish: Dynamics of biomedical publications by deceased authors.
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- PLoS ONE, 2022, v. 17, n. 9, p. 1, doi. 10.1371/journal.pone.0273783
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- Article
Adverse Pathological Findings at Radical Prostatectomy following Active Surveillance: Results from the Movember GAP3 Cohort.
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- Cancers, 2022, v. 14, n. 15, p. 3558, doi. 10.3390/cancers14153558
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- Article
Prostate cancer multiparametric magnetic resonance imaging visibility is a tumor-intrinsic phenomena.
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- Journal of Hematology & Oncology, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13045-022-01268-6
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- Article
Tumor molecular differences associated with outcome disparities of Black patients with head and neck cancer.
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- Head & Neck, 2022, v. 44, n. 5, p. 1124, doi. 10.1002/hed.27007
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- Publication type:
- Article
Data-driven identification of inherent features of eukaryotic stress-responsive genes.
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- NAR Genomics & Bioinformatics, 2022, v. 4, n. 1, p. 1, doi. 10.1093/nargab/lqac018
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- Article
Serological abnormalities that predict progression to systemic autoimmune rheumatic diseases in antinuclear antibody–positive individuals.
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- Rheumatology, 2022, v. 61, n. 3, p. 1092, doi. 10.1093/rheumatology/keab501
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- Publication type:
- Article
Introduction and expression of PIK3CA<sup>E545K</sup> in a papillary thyroid cancer BRAF<sup>V600E</sup> cell line leads to a dedifferentiated aggressive phenotype.
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- Journal of Otolaryngology -- Head & Neck Surgery, 2022, v. 51, n. 1, p. 1, doi. 10.1186/s40463-022-00558-w
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- Article
Fumarate hydratase variant prevalence and manifestations among individuals receiving germline testing.
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- Cancer (0008543X), 2022, v. 128, n. 4, p. 675, doi. 10.1002/cncr.33997
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- Publication type:
- Article
Optimization of small extracellular vesicle isolation from expressed prostatic secretions in urine for in‐depth proteomic analysis.
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- Journal of Extracellular Vesicles, 2022, v. 11, n. 2, p. 1, doi. 10.1002/jev2.12184
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- Publication type:
- Article
Age influences on the molecular presentation of tumours.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-021-27889-y
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- Publication type:
- Article
Comparison of Response to Definitive Radiotherapy for Localized Prostate Cancer in Black and White Men: A Meta-analysis.
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- JAMA Network Open, 2021, v. 4, n. 12, p. e2139769, doi. 10.1001/jamanetworkopen.2021.39769
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- Publication type:
- Article
The telomere length landscape of prostate cancer.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-27223-6
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- Publication type:
- Article
A Canadian Study of Cisplatin Metabolomics and Nephrotoxicity (ACCENT): A Clinical Research Protocol.
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- Canadian Journal of Kidney Health & Disease, 2021, p. 1, doi. 10.1177/20543581211057708
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- Publication type:
- Article
3p Arm Loss and Survival in Head and Neck Cancer: An Analysis of TCGA Dataset.
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- Cancers, 2021, v. 13, n. 21, p. 5313, doi. 10.3390/cancers13215313
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- Publication type:
- Article
Sex Differences in Cancer Genomes: Much Learned, More Unknown.
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- Endocrinology, 2021, v. 162, n. 11, p. 1, doi. 10.1210/endocr/bqab170
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- Publication type:
- Article
Somatic driver mutation prevalence in 1844 prostate cancers identifies ZNRF3 loss as a predictor of metastatic relapse.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26489-0
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- Publication type:
- Article
A proteomic investigation of isogenic radiation resistant prostate cancer cell lines.
- Published in:
- Proteomics - Clinical Applications, 2021, v. 15, n. 5, p. 1, doi. 10.1002/prca.202100037
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- Article
Comparative survival analysis of multiparametric tests—when molecular tests disagree—A TEAM Pathology study.
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- NPJ Breast Cancer, 2021, v. 7, n. 1, p. 1, doi. 10.1038/s41523-021-00297-7
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- Publication type:
- Article
Copy Number Profiles of Prostate Cancer in Men of Middle Eastern Ancestry.
- Published in:
- Cancers, 2021, v. 13, n. 10, p. 2363, doi. 10.3390/cancers13102363
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- Publication type:
- Article
Transcriptional perturbation of protein arginine methyltransferase-5 exhibits MTAP-selective oncosuppression.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-86834-7
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- Article
Clinical perspectives from ongoing trials in oligometastatic or oligorecurrent prostate cancer: an analysis of clinical trials registries.
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- World Journal of Urology, 2021, v. 39, n. 2, p. 317, doi. 10.1007/s00345-019-03063-4
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- Publication type:
- Article
A Canadian Study of Cisplatin Metabolomics and Nephrotoxicity (ACCENT): A Clinical Research Protocol.
- Published in:
- Canadian Journal of Kidney Health & Disease, 2021, p. 1, doi. 10.1177/20543581211057708
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- Publication type:
- Article
Analysis of the TCGA Dataset Reveals that Subsites of Laryngeal Squamous Cell Carcinoma Are Molecularly Distinct.
- Published in:
- Cancers, 2021, v. 13, n. 1, p. 105, doi. 10.3390/cancers13010105
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- Publication type:
- Article
Quantifying the influence of mutation detection on tumour subclonal reconstruction.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-20055-w
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- Publication type:
- Article
A robust benchmark for detection of germline large deletions and insertions.
- Published in:
- Nature Biotechnology, 2020, v. 38, n. 11, p. 1347, doi. 10.1038/s41587-020-0538-8
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- Article
Author Correction: A robust benchmark for detection of germline large deletions and insertions.
- Published in:
- 2020
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- Publication type:
- Correction Notice
Targeted Mass Spectrometry of a Clinically Relevant PSA Variant from Post‐DRE Urines for Quantitation and Genotype Determination.
- Published in:
- Proteomics - Clinical Applications, 2020, v. 14, n. 6, p. 1, doi. 10.1002/prca.202000012
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- Article
TAM family receptors in conjunction with MAPK signalling are involved in acquired resistance to PI3Kα inhibition in head and neck squamous cell carcinoma.
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- Journal of Experimental & Clinical Cancer Research (17569966), 2020, v. 39, n. 1, p. N.PAG, doi. 10.1186/s13046-020-01713-9
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- Article
Flavopiridol causes cell cycle inhibition and demonstrates anti-cancer activity in anaplastic thyroid cancer models.
- Published in:
- PLoS ONE, 2020, v. 15, n. 9, p. 1, doi. 10.1371/journal.pone.0239315
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- Article
Computational approaches to support comparative analysis of multiparametric tests: Modelling versus Training.
- Published in:
- PLoS ONE, 2020, v. 15, n. 9, p. 1, doi. 10.1371/journal.pone.0238593
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- Publication type:
- Article
Sex differences in oncogenic mutational processes.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-17359-2
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- Article
The landscape of RNA polymerase II-associated chromatin interactions in prostate cancer.
- Published in:
- 2020
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- Publication type:
- journal article
Transgenerational epigenetic and transcriptomic effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure in rat.
- Published in:
- Archives of Toxicology, 2020, v. 94, n. 5, p. 1613, doi. 10.1007/s00204-020-02730-5
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- Publication type:
- Article
Divergent mutational processes distinguish hypoxic and normoxic tumours.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-14052-x
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- Publication type:
- Article
Inferring structural variant cancer cell fraction.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-14351-8
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- Publication type:
- Article
A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-13825-8
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- Article
Integrative pathway enrichment analysis of multivariate omics data.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-13983-9
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- Publication type:
- Article
Genomic footprints of activated telomere maintenance mechanisms in cancer.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-13824-9
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- Publication type:
- Article
Optimization and expansion of non-negative matrix factorization.
- Published in:
- BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-019-3312-5
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- Article
A transcriptome-based signature of pathological angiogenesis predicts breast cancer patient survival.
- Published in:
- PLoS Genetics, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pgen.1008482
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- Publication type:
- Article