Works matching AU Boulesteix, Anne-Laure

Results: 101

Commentary: Regression Models—Efforts Are Required to Improve Statistical Practice and Teaching.

Published in:

Statistics in Medicine, 2025, v. 44, n. 13/14, p. 1, doi. 10.1002/sim.10341

By:

Sauerbrei, Willi;
Ambrogi, Federico;
de Bin, Riccardo;
Boulesteix, Anne‐Laure;
Goetghebeur, Els;
Huebner, Marianne

Publication type:

Article

Improving cross-study prediction through addon batch effect adjustment or addon normalization.

Published in:

Bioinformatics, 2017, v. 33, n. 3, p. 397, doi. 10.1093/bioinformatics/btw650

By:

Hornung, Roman;
Causeur, David;
Bernau, Christoph;
Boulesteix, Anne-Laure

Publication type:

Article

Cross-study validation for the assessment of prediction algorithms.

Published in:

Bioinformatics, 2014, v. 30, n. 12, p. i105, doi. 10.1093/bioinformatics/btu279

By:

Bernau, Christoph;
Riester, Markus;
Boulesteix, Anne-Laure;
Parmigiani, Giovanni;
Huttenhower, Curtis;
Waldron, Levi;
Trippa, Lorenzo

Publication type:

Article

On representative and illustrative comparisons with real data in bioinformatics: response to the letter to the editor by Smith et al.

Published in:

2013

By:

Boulesteix, Anne-Laure

Publication type:

Letter

Over-optimism in bioinformatics: an illustration.

Published in:

Bioinformatics, 2010, v. 26, n. 16, p. 1990, doi. 10.1093/bioinformatics/btq323

By:

Jelizarow, Monika;
Guillemot, Vincent;
Tenenhaus, Arthur;
Strimmer, Korbinian;
Boulesteix, Anne-Laure

Publication type:

Article

Over-optimism in bioinformatics research.

Published in:

2010

By:

Boulesteix, Anne-Laure

Publication type:

Letter

Mediation analysis reveals common mechanisms of RUNX1 point mutations and RUNX1/RUNX1T1 fusions influencing survival of patients with acute myeloid leukemia.

Published in:

Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-29593-2

By:

Hornung, Roman;
Jurinovic, Vindi;
Batcha, Aarif M. N.;
Bamopoulos, Stefanos A.;
Rothenberg-Thurley, Maja;
Amler, Susanne;
Sauerland, Maria Cristina;
Berdel, Wolfgang E.;
Wörmann, Bernhard J.;
Bohlander, Stefan K.;
Braess, Jan;
Hiddemann, Wolfgang;
Lehmann, Sören;
Mareschal, Sylvain;
Spiekermann, Karsten;
Metzeler, Klaus H.;
Herold, Tobias;
Boulesteix, Anne-Laure

Publication type:

Article

On the optimistic performance evaluation of newly introduced bioinformatic methods.

Published in:

Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02365-4

By:

Buchka, Stefan;
Hapfelmeier, Alexander;
Gardner, Paul P.;
Wilson, Rory;
Boulesteix, Anne-Laure

Publication type:

Article

Live music reduces stress levels in very low-birthweight infants.

Published in:

Acta Paediatrica, 2015, v. 104, n. 4, p. 360, doi. 10.1111/apa.12913

By:

Schwilling, Diana;
Vogeser, Michael;
Kirchhoff, Fabian;
Schwaiblmair, Frauke;
Boulesteix, Anne‐Laure;
Schulze, Andreas;
Flemmer, Andreas W.

Publication type:

Article

Statistical analysis of high-dimensional biomedical data: a gentle introduction to analytical goals, common approaches and challenges.

Published in:

BMC Medicine, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12916-023-02858-y

By:

Rahnenführer, Jörg;
De Bin, Riccardo;
Benner, Axel;
Ambrogi, Federico;
Lusa, Lara;
Boulesteix, Anne-Laure;
Migliavacca, Eugenia;
Binder, Harald;
Michiels, Stefan;
Sauerbrei, Willi;
McShane, Lisa

Publication type:

Article

To Tweak or Not to Tweak. How Exploiting Flexibilities in Gene Set Analysis Leads to Overoptimism.

Published in:

Biometrical Journal, 2025, v. 67, n. 1, p. 1, doi. 10.1002/bimj.70016

By:

Wünsch, Milena;
Sauer, Christina;
Herrmann, Moritz;
Hinske, Ludwig Christian;
Boulesteix, Anne‐Laure

Publication type:

Article

A Plea for Neutral Comparison Studies in Computational Sciences.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0061562

By:

Boulesteix, Anne-Laure;
Lauer, Sabine;
Eugster, Manuel J. A.

Publication type:

Article

Iterative Reconstruction of High-Dimensional Gaussian Graphical Models Based on a New Method to Estimate Partial Correlations under Constraints.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0060536

By:

Guillemot, Vincent;
Bender, Andreas;
Boulesteix, Anne-Laure

Publication type:

Article

Mid-term outcomes of patients with PCI prior to CABG in comparison to patients with primary CABG.

Published in:

2010

By:

Eifert S;
Mair H;
Boulesteix AL;
Kilian E;
Adamczak M;
Reichart B;
Lamm P;
Eifert, Sandra;
Mair, Helmut;
Boulesteix, Anne-Laure;
Kilian, Eckehard;
Adamczak, Martin;
Reichart, Bruno;
Lamm, Peter

Publication type:

journal article

Interleukin-22 is elevated in lavage from patients with lung cancer and other pulmonary diseases.

Published in:

2016

By:

Tufman, Amanda;
Huber, Rudolf Maria;
Völk, Stefanie;
Aigner, Frederic;
Edelmann, Martin;
Gamarra, Fernando;
Kiefl, Rosemarie;
Kahnert, Kathrin;
Tian, Fei;
Boulesteix, Anne-Laure;
Endres, Stefan;
Kobold, Sebastian

Publication type:

journal article

A white paper on good research practices in benchmarking: The case of cluster analysis.

Published in:

WIREs: Data Mining & Knowledge Discovery, 2023, v. 13, n. 6, p. 1, doi. 10.1002/widm.1511

By:

Van Mechelen, Iven;
Boulesteix, Anne‐Laure;
Dangl, Rainer;
Dean, Nema;
Hennig, Christian;
Leisch, Friedrich;
Steinley, Douglas;
Warrens, Matthijs J.

Publication type:

Article

Hyperparameter optimization: Foundations, algorithms, best practices, and open challenges.

Published in:

WIREs: Data Mining & Knowledge Discovery, 2023, v. 13, n. 2, p. 1, doi. 10.1002/widm.1484

By:

Bischl, Bernd;
Binder, Martin;
Lang, Michel;
Pielok, Tobias;
Richter, Jakob;
Coors, Stefan;
Thomas, Janek;
Ullmann, Theresa;
Becker, Marc;
Boulesteix, Anne‐Laure;
Deng, Difan;
Lindauer, Marius

Publication type:

Article

Validation of cluster analysis results on validation data: A systematic framework.

Published in:

WIREs: Data Mining & Knowledge Discovery, 2022, v. 12, n. 3, p. 1, doi. 10.1002/widm.1444

By:

Ullmann, Theresa;
Hennig, Christian;
Boulesteix, Anne‐Laure

Publication type:

Article

Over‐optimism in benchmark studies and the multiplicity of design and analysis options when interpreting their results.

Published in:

WIREs: Data Mining & Knowledge Discovery, 2022, v. 12, n. 2, p. 1, doi. 10.1002/widm.1441

By:

Nießl, Christina;
Herrmann, Moritz;
Wiedemann, Chiara;
Casalicchio, Giuseppe;
Boulesteix, Anne‐Laure

Publication type:

Article

Hyperparameters and tuning strategies for random forest.

Published in:

WIREs: Data Mining & Knowledge Discovery, 2019, v. 9, n. 3, p. N.PAG, doi. 10.1002/widm.1301

By:

Probst, Philipp;
Wright, Marvin N.;
Boulesteix, Anne‐Laure

Publication type:

Article

Overview of random forest methodology and practical guidance with emphasis on computational biology and bioinformatics.

Published in:

WIREs: Data Mining & Knowledge Discovery, 2012, v. 2, n. 6, p. 493, doi. 10.1002/widm.1072

By:

Boulesteix, Anne-Laure;
Janitza, Silke;
Kruppa, Jochen;
König, Inke R.

Publication type:

Article

From RNA sequencing measurements to the final results: A practical guide to navigating the choices and uncertainties of gene set analysis.

Published in:

WIREs: Computational Statistics, 2024, v. 16, n. 1, p. 1, doi. 10.1002/wics.1643

By:

Wünsch, Milena;
Sauer, Christina;
Callahan, Patrick;
Hinske, Ludwig Christian;
Boulesteix, Anne‐Laure

Publication type:

Article

Prediction approaches for partly missing multi‐omics covariate data: A literature review and an empirical comparison study.

Published in:

WIREs: Computational Statistics, 2024, v. 16, n. 1, p. 1, doi. 10.1002/wics.1626

By:

Hornung, Roman;
Ludwigs, Frederik;
Hagenberg, Jonas;
Boulesteix, Anne‐Laure

Publication type:

Article

Single-center versus multi-center data sets for molecular prognostic modeling: a simulation study.

Published in:

2020

By:

Samaga, Daniel;
Hornung, Roman;
Braselmann, Herbert;
Hess, Julia;
Zitzelsberger, Horst;
Belka, Claus;
Boulesteix, Anne-Laure;
Unger, Kristian

Publication type:

journal article

Effective methods to enhance medical students' cardioversion and transcutaneous cardiac pacing skills retention - a prospective controlled study.

Published in:

BMC Medical Education, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12909-022-03495-4

By:

Kowalski, Christian;
Boulesteix, Anne-Laure;
Harendza, Sigrid

Publication type:

Article

Combining location-and-scale batch effect adjustment with data cleaning by latent factor adjustment.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-015-0870-z

By:

Hornung, Roman;
Boulesteix, Anne-Laure;
Causeur, David

Publication type:

Article

Multiple Testing for SNP-SNP Interactions.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2007, v. 6, n. 1, p. 1, doi. 10.2202/1544-6115.1315

By:

Boulesteix, Anne-Laure;
Strobl, Carolin;
Wagenpfeil, Stefan;
Wichmann, H.-Erich;
Weidinger, Stefan

Publication type:

Article

Reader's reaction to "Dimension Reduction for Classification with Gene Expression Microarray Data" by Dai et al (2006).

Published in:

Statistical Applications in Genetics & Molecular Biology, 2006, v. 5, n. 1, p. 1, doi. 10.2202/1544-6115.1226

By:

Boulesteix, Anne-Laure

Publication type:

Article

PLS Dimension Reduction for Classification with Microarray Data.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2004, v. 3, n. 1, p. 1, doi. 10.2202/1544-6115.1075

By:

Boulesteix, Anne-Laure

Publication type:

Article

Critical appraisal of artificial intelligence-based prediction models for cardiovascular disease.

Published in:

European Heart Journal, 2022, v. 43, n. 31, p. 2921, doi. 10.1093/eurheartj/ehac238

By:

Smeden, Maarten van;
Heinze, Georg;
Calster, Ben Van;
Asselbergs, Folkert W;
Vardas, Panos E;
Bruining, Nico;
Jaegere, Peter de;
Moore, Jason H;
Denaxas, Spiros;
Boulesteix, Anne Laure;
Moons, Karel G M

Publication type:

Article

Predicting transcription factor activities from combined analysis of microarray and ChIP data: a partial least squares approach.

Published in:

Theoretical Biology & Medical Modelling, 2005, v. 2, p. 23, doi. 10.1186/1742-4682-2-23

By:

Boulesteix, Anne-Laure;
Strimmer, Korbinian

Publication type:

Article

Stability Investigations of Multivariable Regression Models Derived from Low- and High-Dimensional Data.

Published in:

Journal of Biopharmaceutical Statistics, 2011, v. 21, n. 6, p. 1206, doi. 10.1080/10543406.2011.629890

By:

Sauerbrei, Willi;
Boulesteix, Anne-Laure;
Binder, Harald

Publication type:

Article

Tunability: Importance of Hyperparameters of Machine Learning Algorithms.

Published in:

Journal of Machine Learning Research, 2019, n. 30-56, p. 1

By:

Probst, Philipp;
Boulesteix, Anne-Laure;
Bischl, Bernd

Publication type:

Article

To Tune or Not to Tune the Number of Trees in Random Forest.

Published in:

Journal of Machine Learning Research, 2018, v. 18, n. 154-234, p. 1

By:

Probst, Philipp;
Boulesteix, Anne-Laure

Publication type:

Article

NetCoMi: network construction and comparison for microbiome data in R.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 4, p. 1, doi. 10.1093/bib/bbaa290

By:

Peschel, Stefanie;
Müller, Christian L;
Mutius, Erika von;
Boulesteix, Anne-Laure;
Depner, Martin

Publication type:

Article

Large-scale benchmark study of survival prediction methods using multi-omics data.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 3, p. 1, doi. 10.1093/bib/bbaa167

By:

Herrmann, Moritz;
Probst, Philipp;
Hornung, Roman;
Jurinovic, Vindi;
Boulesteix, Anne-Laure

Publication type:

Article

Combining clinical and molecular data in regression prediction models: insights from a simulation study.

Published in:

Briefings in Bioinformatics, 2020, v. 21, n. 6, p. 1904, doi. 10.1093/bib/bbz136

By:

Bin, Riccardo De;
Boulesteix, Anne-Laure;
Benner, Axel;
Becker, Natalia;
Sauerbrei, Willi

Publication type:

Article

Letter to the Editor: On the term 'interaction' and related phrases in the literature on Random Forests.

Published in:

Briefings in Bioinformatics, 2015, v. 16, n. 2, p. 338, doi. 10.1093/bib/bbu012

By:

Boulesteix, Anne-Laure;
Janitza, Silke;
Hapfelmeier, Alexander;
Van Steen, Kristel;
Strobl, Carolin

Publication type:

Article

Random forest Gini importance favours SNPs with large minor allele frequency: impact, sources and recommendations.

Published in:

Briefings in Bioinformatics, 2012, v. 13, n. 3, p. 292, doi. 10.1093/bib/bbr053

By:

Boulesteix, Anne-Laure;
Bender, Andreas;
Lorenzo Bermejo, Justo;
Strobl, Carolin

Publication type:

Article

Editorial.

Published in:

Briefings in Bioinformatics, 2011, v. 12, n. 3, p. 187, doi. 10.1093/bib/bbr027

By:

Boulesteix, Anne-Laure

Publication type:

Article

Added predictive value of high-throughput molecular data to clinical data and its validation.

Published in:

Briefings in Bioinformatics, 2011, v. 12, n. 3, p. 215, doi. 10.1093/bib/bbq085

By:

Boulesteix, Anne-Laure;
Sauerbrei, Willi

Publication type:

Article

Stability and aggregation of ranked gene lists.

Published in:

Briefings in Bioinformatics, 2009, v. 10, n. 5, p. 556, doi. 10.1093/bib/bbp034

By:

Boulesteix, Anne-Laure;
Slawski, Martin

Publication type:

Article

Partial least squares: a versatile tool for the analysis of high-dimensional genomic data.

Published in:

Briefings in Bioinformatics, 2007, v. 8, n. 1, p. 32, doi. 10.1093/bib/bb1016

By:

Boulesteix, Anne-Laure;
Strimmer, Korbinian

Publication type:

Article

Examining the robustness of observational associations to model, measurement and sampling uncertainty with the vibration of effects framework.

Published in:

2021

By:

Klau, Simon;
Hoffmann, Sabine;
Patel, Chirag J;
Ioannidis, John PA;
Boulesteix, Anne-Laure

Publication type:

journal article

Investigating the prediction ability of survival models based on both clinical and omics data: two case studies.

Published in:

Statistics in Medicine, 2014, v. 33, n. 30, p. 5310, doi. 10.1002/sim.6246

By:

De Bin, Riccardo;
Sauerbrei, Willi;
Boulesteix, Anne‐Laure

Publication type:

Article

COMPANION: development of a patient-centred complexity and casemix classification for adult palliative care patients based on needs and resource use – a protocol for a cross-sectional multi-centre study.

Published in:

BMC Palliative Care, 2022, v. 21, n. 1, p. 1, doi. 10.1186/s12904-021-00897-x

By:

Hodiamont, Farina;
Schatz, Caroline;
Gesell, Daniela;
Leidl, Reiner;
Boulesteix, Anne-Laure;
Nauck, Friedemann;
Wikert, Julia;
Jansky, Maximiliane;
Kranz, Steven;
Bausewein, Claudia

Publication type:

Article

COMPANION: development of a patient-centred complexity and casemix classification for adult palliative care patients based on needs and resource use – a protocol for a cross-sectional multi-centre study.

Published in:

BMC Palliative Care, 2022, v. 21, n. 1, p. 1, doi. 10.1186/s12904-021-00897-x

By:

Hodiamont, Farina;
Schatz, Caroline;
Gesell, Daniela;
Leidl, Reiner;
Boulesteix, Anne-Laure;
Nauck, Friedemann;
Wikert, Julia;
Jansky, Maximiliane;
Kranz, Steven;
Bausewein, Claudia

Publication type:

Article

Assessment of predictive performance in incomplete data by combining internal validation and multiple imputation.

Published in:

BMC Medical Research Methodology, 2016, v. 16, p. 1, doi. 10.1186/s12874-016-0239-7

By:

Wahl, Simone;
Boulesteix, Anne-Laure;
Zierer, Astrid;
Thorand, Barbara;
de Wiel, Mark Avan

Publication type:

Article

A measure of the impact of CV incompleteness on prediction error estimation with application to PCA and normalization.

Published in:

2015

By:

Hornung, Roman;
Bernau, Christoph;
Truntzer, Caroline;
Wilson, Rory;
Stadler, Thomas;
Boulesteix, Anne-Laure

Publication type:

journal article

Added predictive value of omics data: specific issues related to validation illustrated by two case studies.

Published in:

BMC Medical Research Methodology, 2014, v. 14, p. 1, doi. 10.1186/1471-2288-14-117

By:

De Bin, Riccardo;
Herold, Tobias;
Boulesteix, Anne-Laure

Publication type:

Article