Works by Bokes, Pavol

Results: 16

Stochastic gene expression in proliferating cells: Differing noise intensity in single-cell and population perspectives.

Published in:

PLoS Computational Biology, 2025, v. 21, n. 6, p. 1, doi. 10.1371/journal.pcbi.1013014

By:

Zhang, Zhanhao;
Zabaikina, Iryna;
Nieto, Cesar;
Vahdat, Zahra;
Bokes, Pavol;
Singh, Abhyudai

Publication type:

Article

Gene expression noise is affected differentially by feedback in burst frequency and burst size.

Published in:

Journal of Mathematical Biology, 2017, v. 74, n. 6, p. 1483, doi. 10.1007/s00285-016-1059-4

By:

Bokes, Pavol;
Singh, Abhyudai

Publication type:

Article

Multiscale stochastic modelling of gene expression.

Published in:

Journal of Mathematical Biology, 2012, v. 65, n. 3, p. 493, doi. 10.1007/s00285-011-0468-7

By:

Bokes, Pavol;
King, John;
Wood, Andrew;
Loose, Matthew

Publication type:

Article

Exact and approximate distributions of protein and mRNA levels in the low-copy regime of gene expression.

Published in:

Journal of Mathematical Biology, 2012, v. 64, n. 5, p. 829, doi. 10.1007/s00285-011-0433-5

By:

Bokes, Pavol;
King, John;
Wood, Andrew;
Loose, Matthew

Publication type:

Article

Translation regulation by RNA stem-loops can reduce gene expression noise.

Published in:

BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-024-05939-8

By:

Çelik, Candan;
Bokes, Pavol;
Singh, Abhyudai

Publication type:

Article

Exact and WKB-approximate distributions in a gene expression model with feedback in burst frequency, burst size, and protein stability.

Published in:

Discrete & Continuous Dynamical Systems - Series B, 2022, v. 27, n. 4, p. 2129, doi. 10.3934/dcdsb.2021126

By:

Bokes, Pavol

Publication type:

Article

Protein Copy Number Distributions for a Self-Regulating Gene in the Presence of Decoy Binding Sites.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0120555

By:

Bokes, Pavol;
Singh, Abhyudai

Publication type:

Article

Translation regulation by RNA stem-loops can reduce gene expression noise.

Published in:

BMC Bioinformatics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12859-024-05939-8

By:

Çelik, Candan;
Bokes, Pavol;
Singh, Abhyudai

Publication type:

Article

Reversible Transitions in a Fluctuation Assay Modify the Tail of Luria–Delbrück Distribution.

Published in:

Axioms (2075-1680), 2023, v. 12, n. 3, p. 249, doi. 10.3390/axioms12030249

By:

Bokes, Pavol;
Hlubinová, Anna;
Singh, Abhyudai

Publication type:

Article

Mixture distributions in a stochastic gene expression model with delayed feedback: a WKB approximation approach.

Published in:

Journal of Mathematical Biology, 2020, v. 81, n. 1, p. 343, doi. 10.1007/s00285-020-01512-y

By:

Bokes, Pavol;
Borri, Alessandro;
Palumbo, Pasquale;
Singh, Abhyudai

Publication type:

Article

Limit-cycle oscillatory coexpression of cross-inhibitory transcription factors: a model mechanism for lineage promiscuity.

Published in:

Mathematical Medicine & Biology: A Journal of the IMA, 2019, v. 36, n. 1, p. 113, doi. 10.1093/imammb/dqy003

By:

Bokes, Pavol;
King, John R

Publication type:

Article

A bistable genetic switch which does not require high co-operativity at the promoter: a two-timescale model for the PU.1–GATA-1 interaction.

Published in:

Mathematical Medicine & Biology: A Journal of the IMA, 2009, v. 26, n. 2, p. 117, doi. 10.1093/imammb/dqn026

By:

Bokes, Pavol;
King, John R.;
Loose, Matthew

Publication type:

Article

High Cooperativity in Negative Feedback can Amplify Noisy Gene Expression.

Published in:

Bulletin of Mathematical Biology, 2018, v. 80, n. 7, p. 1871, doi. 10.1007/s11538-018-0438-y

By:

Bokes, Pavol;
Lin, Yen Ting;
Singh, Abhyudai

Publication type:

Article

Postponing production exponentially enhances the molecular memory of a stochastic switch.

Published in:

European Journal of Applied Mathematics, 2022, v. 33, n. 1, p. 182, doi. 10.1017/S0956792520000479

By:

BOKES, PAVOL

Publication type:

Article

Non-monotonicity of Fano factor in a stochastic model for protein expression with sequesterisation at decoy binding sites.

Published in:

Biomath, 2017, v. 6, n. 2, p. 1, doi. 10.11145/j.biomath.2017.10.217

By:

Hojcka, Michal;
Bokes, Pavol

Publication type:

Article

Transcriptional Bursting Diversifies the Behaviour of a Toggle Switch: Hybrid Simulation of Stochastic Gene Expression.

Published in:

Bulletin of Mathematical Biology, 2013, v. 75, n. 2, p. 351, doi. 10.1007/s11538-013-9811-z

By:

Bokes, Pavol;
King, John;
Wood, Andrew;
Loose, Matthew

Publication type:

Article