Works matching AU Bischoff, Rainer

Results: 69

A high-throughput processing service for retention time alignment of complex proteomics and metabolomics LC-MS data.

Published in:

Bioinformatics, 2011, v. 27, n. 8, p. 1176, doi. 10.1093/bioinformatics/btr094

By:

Ahmad, Isthiaq;
Suits, Frank;
Hoekman, Berend;
Swertz, Morris A.;
Byelas, Heorhiy;
Dijkstra, Martijn;
Hooft, Rob;
Katsubo, Dmitry;
van Breukelen, Bas;
Bischoff, Rainer;
Horvatovich, Peter

Publication type:

Article

A noise model for mass spectrometry based proteomics.

Published in:

Bioinformatics, 2008, v. 24, n. 8, p. 1070

By:

Peicheng Du;
Gustavo Stolovitzky;
Peter Horvatovich;
Rainer Bischoff;
Jihyeon Lim;
Frank Suits

Publication type:

Article

Cigarette smoke induces endoplasmic reticulum stress response and proteasomal dysfunction in human alveolar epithelial cells.

Published in:

Experimental Physiology, 2013, v. 98, n. 1, p. 316, doi. 10.1113/expphysiol.2012.067249

By:

Somborac‐Bačura, Anita;
van der Toorn, Marco;
Franciosi, Lorenza;
Slebos, Dirk‐Jan;
Žanić‐Grubišić, Tihana;
Bischoff, Rainer;
van Oosterhout, Antoon J. M.

Publication type:

Article

Determination of the disulfide bond pattern of the endogenous and recombinant angiogenesis inhibitor endostatin by mass spectrometry.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2001, v. 15, n. 14, p. 1222, doi. 10.1002/rcm.367

By:

John, Harald;
Forssmann, Wolf-Georg;
Bischoff, Rainer

Publication type:

Article

Chemical isotope labeling for quantitative proteomics.

Published in:

Mass Spectrometry Reviews, 2023, v. 42, n. 2, p. 546, doi. 10.1002/mas.21709

By:

Tian, Xiaobo;
Permentier, Hjalmar P.;
Bischoff, Rainer

Publication type:

Article

Susceptibility to COPD: Differential Proteomic Profiling after Acute Smoking.

Published in:

PLoS ONE, 2014, v. 9, n. 7, p. 1, doi. 10.1371/journal.pone.0102037

By:

Franciosi, Lorenza;
Postma, Dirkje S.;
van den Berge, Maarten;
Govorukhina, Natalia;
Horvatovich, Peter L.;
Fusetti, Fabrizia;
Poolman, Bert;
Lodewijk, Monique E.;
Timens, Wim;
Bischoff, Rainer;
ten Hacken, Nick H. T.

Publication type:

Article

Determination of regulatory phosphorylation sites in nanogram amounts of a synthetic fragment of ZAP-70 using microprobe NMR and on-line coupled capillary HPLC-NMR.

Published in:

Magnetic Resonance in Chemistry, 2005, v. 43, n. 9, p. 747, doi. 10.1002/mrc.1628

By:

Hentschel, Petra;
Krucker, Manfred;
Grynbaum, Marc David;
Putzbach, Karsten;
Bischoff, Rainer;
Albert, Klaus

Publication type:

Article

Anaphylaxis due to a latex vaginal vibrator.

Published in:

1992

By:

Effendy, Isaak;
Gieler, Uwe;
Bischoff, Rainer;
Haple, Rudolf

Publication type:

Case Study

Confounding Factors Affecting sRAGE as a Biomarker for Chronic Obstructive Pulmonary Disease.

Published in:

2019

By:

Pouwels, Simon D;
Klont, Frank;
Bischoff, Rainer;
Ten Hacken, Nick H T

Publication type:

Letter

Reply to Biswas: Acute and Chronic Effects of Cigarette Smoking on sRAGE.

Published in:

2019

By:

Pouwels, Simon D;
Klont, Frank;
Kwiatkowski, Marcel;
Wiersma, Valerie R;
Faiz, Alen;
van den Berge, Maarten;
Horvatovich, Péter;
Bischoff, Rainer;
Ten Hacken, Nick H T

Publication type:

Letter

Cigarette Smoking Acutely Decreases Serum Levels of the Chronic Obstructive Pulmonary Disease Biomarker sRAGE.

Published in:

2018

By:

Pouwels, Simon D;
Klont, Frank;
Kwiatkowski, Marcel;
Wiersma, Valerie R;
Faiz, Alen;
van den Berge, Maarten;
Horvatovich, Péter;
Bischoff, Rainer;
Ten Hacken, Nick H T

Publication type:

Letter

Cytoplasmic p21 expression levels determine cisplatin resistance in human testicular cancer.

Published in:

2010

By:

Koster, Roelof;
di Pietro, lessandra;
Timmer-Bosscha, Hetty;
Gibcus, Johan H.;
van den Berg, Anke;
Suurmeijer, Albert J.;
Bischoff, Rainer;
Gietema, Jourik A.;
de Jong, Steven;
di Pietro, Alessandra

Publication type:

journal article

Multiple Testing Issues in Discriminating Compound-Related Peaks and Chromatograms from High Frequency Noise, Spikes and Solvent-Based Noise in LC - MS Data Sets.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2007, v. 6, n. 1, p. 1, doi. 10.2202/1544-6115.1295

By:

Nyangoma, Stephen O.;
Van Kampen, Antoine A. H. C.;
Reijmers, Theo H.;
Govorukhina, Natalia I.;
Van der Zee, Ate G. J.;
Billingham, Lucinda J.;
Bischoff, Rainer;
Jansen, Ritsert C.

Publication type:

Article

Multidimensional separation of tryptic peptides from human serum proteins using reversed-phase, strong cation exchange, weak anion exchange, and fused-core fluorinated stationary phases.

Published in:

Journal of Separation Science, 2013, v. 36, n. 21/22, p. 3463, doi. 10.1002/jssc.201300750

By:

Boichenko, Alexander P.;
Govorukhina, Natalia;
Zee, Ate G. J.;
Bischoff, Rainer

Publication type:

Article

Glycopeptide enrichment and separation for protein glycosylation analysis.

Published in:

Journal of Separation Science, 2012, v. 35, n. 18, p. 2341, doi. 10.1002/jssc.201200434

By:

Ongay, Sara;
Boichenko, Alexander;
Govorukhina, Natalia;
Bischoff, Rainer

Publication type:

Article

HDAC1-3 inhibitor MS-275 enhances IL10 expression in RAW264.7 macrophages and reduces cigarette smoke-induced airway inflammation in mice.

Published in:

Scientific Reports, 2017, p. 45047, doi. 10.1038/srep45047

By:

Leus, Niek G. J.;
van den Bosch, Thea;
van der Wouden, Petra E.;
Krist, Kim;
Ourailidou, Maria E.;
Eleftheriadis, Nikolaos;
Kistemaker, Loes E. M.;
Bos, Sophie;
Gjaltema, Rutger A. F.;
Mekonnen, Solomon A.;
Bischoff, Rainer;
Gosens, Reinoud;
Haisma, Hidde J.;
Dekker, Frank J.

Publication type:

Article

The degradation of nucleotide triphosphates extracted under boiling ethanol conditions is prevented by the yeast cellular matrix.

Published in:

Metabolomics, 2017, v. 13, n. 1, p. 1, doi. 10.1007/s11306-016-1140-4

By:

Gil, Andres;
Siegel, David;
Bonsing-Vedelaar, Silke;
Permentier, Hjalmar;
Reijngoud, Dirk-Jan;
Dekker, Frank;
Bischoff, Rainer

Publication type:

Article

Plasma sRAGE levels strongly associate with centrilobular emphysema assessed by HRCT scans.

Published in:

2022

By:

Klont, Frank;
Horvatovich, Peter;
Bowler, Russell P.;
van Rikxoort, Eva;
Charbonnier, Jean-Paul;
Kwiatkowski, Marcel;
Lynch, David A.;
Humphries, Stephen;
Bischoff, Rainer;
ten Hacken, Nick H. T.;
Pouwels, Simon D.

Publication type:

journal article

Stability of energy metabolites-An often overlooked issue in metabolomics studies: A review.

Published in:

Electrophoresis, 2015, v. 36, n. 18, p. 2156, doi. 10.1002/elps.201500031

By:

Gil, Andres;
Siegel, David;
Permentier, Hjalmar;
Reijngoud, Dirk‐Jan;
Dekker, Frank;
Bischoff, Rainer

Publication type:

Article

Proteomic analysis of human epithelial lining fluid by microfluidics-based nano LC- MS/ MS: A feasibility study.

Published in:

Electrophoresis, 2013, v. 34, n. 18, p. 2683, doi. 10.1002/elps.201300020

By:

Franciosi, Lorenza;
Govorukhina, Natalia;
Fusetti, Fabrizia;
Poolman, Bert;
Lodewijk, Monique E.;
Timens, Wim;
Postma, Dirkje;
ten Hacken, Nick;
Bischoff, Rainer

Publication type:

Article

Changes in histone lysine acetylation, but not DNA methylation during facultative hibernation in Syrian hamster liver.

Published in:

Epigenetics Communications, 2024, v. 4, n. 1, p. 1, doi. 10.1186/s43682-023-00024-2

By:

Oosterhof, Marloes M.;
Coussement, Louis;
van Pijkeren, Alienke;
Kwiatkowski, Marcel;
Zwinderman, Martijn R. H.;
Dekker, Frank J.;
de Meyer, Tim;
Reitsema, Vera A.;
Bischoff, Rainer;
Guryev, Victor;
Bouma, Hjalmar R.;
Henning, Rob H.;
Rots, Marianne G.

Publication type:

Article

TEMPO‐Mediated Electrochemical N‐demethylation of Opiate Alkaloids.

Published in:

ChemElectroChem, 2021, v. 8, n. 13, p. 2590, doi. 10.1002/celc.202100784

By:

Najmi, Ali Alipour;
Bhat, M. Faizan;
Bischoff, Rainer;
Poelarends, Gerrit J.;
Permentier, Hjalmar P.

Publication type:

Article

LC-MS in Proteomics and Glycoprotein Analysis.

Published in:

LC-GC Europe, 2002, v. 15, n. 11, p. 26

By:

Bischoff, Rainer;
Barroso, Begona

Publication type:

Article

Mass Spectrometric ITEM-ONE and ITEM-TWO Analyses Confirm and Refine an Assembled Epitope of an Anti-Pertuzumab Affimer.

Published in:

Biomolecules (2218-273X), 2024, v. 14, n. 1, p. 24, doi. 10.3390/biom14010024

By:

Röwer, Claudia;
Olaleye, Oladapo O.;
Bischoff, Rainer;
Glocker, Michael O.

Publication type:

Article

Non-Antibody-Based Binders for the Enrichment of Proteins for Analysis by Mass Spectrometry.

Published in:

Biomolecules (2218-273X), 2021, v. 11, n. 12, p. 1791, doi. 10.3390/biom11121791

By:

Olaleye, Oladapo;
Govorukhina, Natalia;
van de Merbel, Nico C.;
Bischoff, Rainer

Publication type:

Article

Comparison of Targeted Mass Spectrometry Techniques with an Immunoassay: A Case Study for HSP90α.

Published in:

Proteomics - Clinical Applications, 2018, v. 12, n. 1, p. 1, doi. 10.1002/prca.201700107

By:

Güzel, Coşkun;
Govorukhina, Natalia I.;
Stingl, Christoph;
Dekker, Lennard J. M.;
Boichenko, Alexander;
van der Zee, Ate G. J.;
Bischoff, Rainer P. H.;
Luider, Theo M.

Publication type:

Article

Differential expression of protease activity in serum samples of prostate carcinoma patients with metastases.

Published in:

Proteomics - Clinical Applications, 2010, v. 4, n. 10/11, p. 850, doi. 10.1002/prca.201090067

By:

Dekker, Lennard J. M.;
Burgers, Peter C.;
Charif, Halima;
van Rijswijk, Angelique L. C. T.;
Titulaer, Mark K.;
Jenster, Guido;
Bischoff, Rainer;
Bangma, Chris H.;
Luider, Theo M.

Publication type:

Article

Chip-LC-MS for label-free profiling of human serum.

Published in:

Electrophoresis, 2007, v. 28, n. 23, p. 4493, doi. 10.1002/elps.200600719

By:

Horvatovich, Peter;
Govorukhina, Natalia I.;
Reijmers, Theo H.;
van der Zee, Ate G. J.;
Suits, Frank;
Bischoff, Rainer

Publication type:

Article

Characterization of the interaction between human complement protein C4 and a single-chain variable fragment antibody by capillary electrophoresis and surface plasmon resonance.

Published in:

Electrophoresis, 2004, v. 25, n. 10/11, p. 1561, doi. 10.1002/elps.200405887

By:

Reza M. Seifar;
Robbert H. Cool;
Wim J. Quax;
Rainer Bischoff

Publication type:

Article

N -Dealkylation of Amines.

Published in:

Molecules, 2022, v. 27, n. 10, p. 3293, doi. 10.3390/molecules27103293

By:

Najmi, Ali Alipour;
Bischoff, Rainer;
Permentier, Hjalmar P.

Publication type:

Article

MicroPET Evaluation of a Hydroxamate-Based MMP Inhibitor, [(18)F]FB-ML5, in a Mouse Model of Cigarette Smoke-Induced Acute Airway Inflammation.

Published in:

2015

By:

Matusiak, Nathalie;
Waarde, Aren;
Rozeveld, Dennie;
Oosterhout, Antoon;
Heijink, Irene;
Castelli, Riccardo;
Overkleeft, Herman;
Bischoff, Rainer;
Dierckx, Rudi;
Elsinga, Philip;
van Waarde, Aren;
van Oosterhout, Antoon J M;
Heijink, Irene H;
Overkleeft, Herman S;
Dierckx, Rudi A J O;
Elsinga, Philip H

Publication type:

journal article

The Impact of Delayed Storage on the Measured Proteome and Metabolome of Human Cerebrospinal Fluid.

Published in:

Clinical Chemistry, 2011, v. 57, n. 12, p. 1703, doi. 10.1373/clinchem.2011.167601

By:

Rosenling, Therese;
Stoop, Marcel P.;
Smolinska, Agnieszka;
Muilwijk, Bas;
Coulier, Leon;
Shi, Shanna;
Dane, Adrie;
Christin, Christin;
Suits, Frank;
Horvatovich, Peter L.;
Wijmenga, Sybren S.;
Buydens, Lutgarde M. C.;
Vreeken, Rob;
Hankemeier, Thomas;
Van Gool, Alain J.;
Luider, Theo M.;
Bischoff, Rainer

Publication type:

Article

Revealing charge heterogeneity of stressed trastuzumab at the subunit level.

Published in:

Analytical & Bioanalytical Chemistry, 2023, v. 415, n. 8, p. 1505, doi. 10.1007/s00216-023-04547-4

By:

Spanov, Baubek;
Baartmans, Bas;
Olaleye, Oladapo;
Nicolardi, Simone;
Govorukhina, Natalia;
Wuhrer, Manfred;
van de Merbel, Nico C.;
Bischoff, Rainer

Publication type:

Article

Selective quantification of the 22-kDa isoform of human growth hormone 1 in serum and plasma by immunocapture and LC–MS/MS.

Published in:

Analytical & Bioanalytical Chemistry, 2022, v. 414, n. 20, p. 6187, doi. 10.1007/s00216-022-04188-z

By:

Sleumer, Bas;
van Faassen, Martijn;
Vos, Michel J.;
Bischoff, Rainer;
Kema, Ido P.;
van de Merbel, Nico C.

Publication type:

Article

Analytical and pharmacological consequences of the in vivo deamidation of trastuzumab and pertuzumab.

Published in:

Analytical & Bioanalytical Chemistry, 2022, v. 414, n. 4, p. 1513, doi. 10.1007/s00216-021-03756-z

By:

Bults, Peter;
van der Voort, Anna;
Meijer, Coby;
Sonke, Gabe S.;
Bischoff, Rainer;
van de Merbel, Nico C.

Publication type:

Article

Correction to: An antibody-free LC-MS/MS method for the quantification of intact insulin-like growth factors 1 and 2 in human plasma.

Published in:

2021

By:

Pratt, Mark S.;
van Faassen, Martijn;
Remmelts, Noah;
Bischoff, Rainer;
Kema, Ido P.

Publication type:

Correction Notice

An antibody-free LC-MS/MS method for the quantification of intact insulin-like growth factors 1 and 2 in human plasma.

Published in:

Analytical & Bioanalytical Chemistry, 2021, v. 413, n. 8, p. 2035, doi. 10.1007/s00216-021-03185-y

By:

Pratt, Mark S.;
van Faassen, Martijn;
Remmelts, Noah;
Bischoff, Rainer;
Kema, Ido P.

Publication type:

Article

Targeted LC-MS/MS for the evaluation of proteomics biomarkers in the blood of neonates with necrotizing enterocolitis and late-onset sepsis.

Published in:

Analytical & Bioanalytical Chemistry, 2018, v. 410, n. 27, p. 7163, doi. 10.1007/s00216-018-1320-3

By:

Chatziioannou, Anastasia Chrysovalantou;
Wolters, Justina Clarinda;
Sarafidis, Kosmas;
Thomaidou, Agathi;
Agakidis, Charalampos;
Govorukhina, Natalia;
Kuivenhoven, Jan Albert;
Bischoff, Rainer;
Theodoridis, Georgios

Publication type:

Article

One- vs two-phase extraction: re-evaluation of sample preparation procedures for untargeted lipidomics in plasma samples.

Published in:

Analytical & Bioanalytical Chemistry, 2018, v. 410, n. 23, p. 5859, doi. 10.1007/s00216-018-1200-x

By:

Gil, Andres;
Zhang, Wenxuan;
Wolters, Justina C.;
Permentier, Hjalmar;
Boer, Theo;
Horvatovich, Peter;
Heiner-Fokkema, M. Rebecca;
Reijngoud, Dirk-Jan;
Bischoff, Rainer

Publication type:

Article

Site-specific quantification of lysine acetylation in the N-terminal tail of histone H4 using a double-labelling, targeted UHPLC MS/MS approach.

Published in:

Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 13, p. 3547, doi. 10.1007/s00216-016-9431-1

By:

D'Urzo, Annalisa;
Boichenko, Alexander;
Bosch, Thea;
Hermans, Jos;
Dekker, Frank;
Andrisano, Vincenza;
Bischoff, Rainer

Publication type:

Article

Differential expression of protease activity in serum samples of prostate carcinoma patients with metastases.

Published in:

Proteomics, 2010, v. 10, n. 12, p. 2348, doi. 10.1002/pmic.200900682

By:

Dekker, Lennard J. M.;
Burgers, Peter C.;
Charif, Halima;
van Rijswijk, Angelique L. C. T.;
Titulaer, Mark K.;
Jenster, Guido;
Bischoff, Rainer;
Bangma, Chris H.;
Luider, Theo M.

Publication type:

Article

Female Specific Association of Low Insulin-Like Growth Factor 1 (IGF1) Levels with Increased Risk of Premature Mortality in Renal Transplant Recipients.

Published in:

Journal of Clinical Medicine, 2020, v. 9, n. 2, p. 293, doi. 10.3390/jcm9020293

By:

Klont, Frank;
Kieneker, Lyanne M.;
Gomes-Neto, Antonio W.;
Stam, Suzanne P.;
ten Hacken, Nick H. T.;
Kema, Ido P.;
van Beek, André P.;
van den Berg, Else;
Horvatovich, Péter;
Bischoff, Rainer;
Bakker, Stephan J. L.

Publication type:

Article

Accumulation of 5-oxoproline in myocardial dysfunction and the protective effects of OPLAH.

Published in:

Science Translational Medicine, 2017, v. 9, n. 415, p. 1, doi. 10.1126/scitranslmed.aam8574

By:

van der Pol, Atze;
Gil, Andres;
Silljé, Herman H. W.;
Tromp, Jasper;
Ovchinnikova, Ekaterina S.;
Vreeswijk-Baudoin, Inge;
Hoes, Martijn;
Domian, Ibrahim J.;
van de Sluis, Bart;
van Deursen, Jan M.;
Voors, Adriaan A.;
van Veldhuisen, Dirk J.;
van Gilst, Wiek H.;
Berezikov, Eugene;
van der Harst, Pim;
de Boer, Rudolf A.;
Bischoff, Rainer;
van der Meer, Peter

Publication type:

Article

An antibody-free LC-MS/MS method for the quantification of sex hormone binding globulin in human serum and plasma.

Published in:

Clinical Chemistry & Laboratory Medicine, 2023, v. 61, n. 7, p. 1266, doi. 10.1515/cclm-2022-1225

By:

Sleumer, Bas;
Zwerwer, Jordan;
van Faassen, Martijn;
Vos, Michel J.;
Bischoff, Rainer;
Kema, Ido P.;
van de Merbel, Nico C.

Publication type:

Article

Cigarette smoking prior to blood sampling acutely affects serum levels of the chronic obstructive pulmonary disease biomarker surfactant protein D.

Published in:

Clinical Chemistry & Laboratory Medicine, 2020, v. 58, n. 8, p. e138, doi. 10.1515/cclm-2019-1246

By:

Klont, Frank;
Horvatovich, Péter;
ten Hacken, Nick H.T.;
Bischoff, Rainer

Publication type:

Article

A quantitative LC-MS/MS method for insulin-like growth factor 1 in human plasma.

Published in:

Clinical Chemistry & Laboratory Medicine, 2018, v. 56, n. 11, p. 1905, doi. 10.1515/cclm-2017-1042

By:

Bronsema, Kees J.;
Klont, Frank;
Schalk, Frank B.;
Bischoff, Rainer;
Kema, Ido P.;
van de Merbel, Nico C.

Publication type:

Article

Relationship between plasma and salivary melatonin and cortisol investigated by LC-MS/MS.

Published in:

Clinical Chemistry & Laboratory Medicine, 2017, v. 55, n. 9, p. 1340, doi. 10.1515/cclm-2016-0817

By:

van Faassen, Martijn;
Bischoff, Rainer;
Kema, Ido P.

Publication type:

Article

The 'un-shrunk' partial correlation in Gaussian graphical models.

Published in:

BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04313-2

By:

Bernal, Victor;
Bischoff, Rainer;
Horvatovich, Peter;
Guryev, Victor;
Grzegorczyk, Marco

Publication type:

Article

Analysis of recombinant proteins by isoelectric focusing in immobilized pH gradients.

Published in:

Electrophoresis, 1992, v. 13, n. 1, p. 214, doi. 10.1002/elps.1150130144

By:

Bischoff, Rainer;
Roecklin, Dominique;
Roitsch, Carolyn

Publication type:

Article

Radiation chemical studies of Gly-Met-Gly in aqueous solution.

Published in:

Free Radical Research, 2016, v. 50, p. S24, doi. 10.1080/10715762.2016.1231402

By:

Barata-Vallejo, Sebastian;
Ferreri, Carla;
Zhang, Tao;
Permentier, Hjalmar;
Bischoff, Rainer;
Bobrowski, Krzysztof;
Chatgilialoglu, Chryssostomos

Publication type:

Article