Works by Birch, James M.

Results: 18

The use of resazurin as a novel antimicrobial agent against Francisella tularensis.

Published in:

Frontiers in Cellular & Infection Microbiology, 2013, v. 3, n. 12, p. 1, doi. 10.3389/fcimb.2013.00093

By:

Schmitt, Deanna M.;
O'Dee, Dawn M.;
Cowan, Brianna N.;
Birch, James W.-M.;
Mazzella, Leanne K.;
Nau, Gerard J.;
Horzempa, Joseph

Publication type:

Article

The use of resazurin as a novel antimicrobial agent against Francisella tularensis.

Published in:

Frontiers in Cellular & Infection Microbiology, 2013, v. 3, p. 1, doi. 10.3389/fcimb.2013.00093

By:

Schmitt, Deanna M.;
O'Dee, Dawn M.;
Cowan, Brianna N.;
Birch, James W.-M.;
Mazzella, Leanne K.;
Nau, Gerard J.;
Horzempa, Joseph

Publication type:

Article

Microdiversity and temporal dynamics of marine bacterial dimethylsulfoniopropionate genes.

Published in:

Environmental Microbiology, 2019, v. 21, n. 5, p. 1687, doi. 10.1111/1462-2920.14560

By:

Nowinski, Brent;
Motard‐Côté, Jessie;
Landa, Marine;
Preston, Christina M.;
Scholin, Christopher A.;
Birch, James M.;
Kiene, Ronald P.;
Moran, Mary Ann

Publication type:

Article

Near real-time, autonomous detection of marine bacterioplankton on a coastal mooring in Monterey Bay, California, using rRNA-targeted DNA probes.

Published in:

Environmental Microbiology, 2009, v. 11, n. 5, p. 1168, doi. 10.1111/j.1462-2920.2009.01848.x

By:

Preston, Christina M.;
Marin III, Roman;
Jensen, Scott D.;
Feldman, Jason;
Birch, James M.;
Massion, Eugene I.;
DeLong, Edward F.;
Suzuki, Marcelino;
Wheeler, Kevin;
Scholin, Christopher A.

Publication type:

Article

Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom.

Published in:

Scientific Data, 2019, v. 6, n. 1, p. N.PAG, doi. 10.1038/s41597-019-0132-4

By:

Nowinski, Brent;
Smith, Christa B.;
Thomas, Courtney M.;
Esson, Kaitlin;
Marin, Roman;
Preston, Christina M.;
Birch, James M.;
Scholin, Christopher A.;
Huntemann, Marcel;
Clum, Alicia;
Foster, Brian;
Foster, Bryce;
Roux, Simon;
Palaniappan, Krishnaveni;
Varghese, Neha;
Mukherjee, Supratim;
Reddy, T. B. K.;
Daum, Chris;
Copeland, Alex;
Chen, I.-Min A.

Publication type:

Article

Co-registered Geochemistry and Metatranscriptomics Reveal Unexpected Distributions of Microbial Activity within a Hydrothermal Vent Field.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01042

By:

Olins, Heather C.;
Rogers, Daniel R.;
Preston, Christina;
Ussler III, William;
Pargett, Douglas;
Jensen, Scott;
Roman, Brent;
Birch, James M.;
Scholin, Christopher A.;
Haroon, M. Fauzi;
Girgui, Peter R.

Publication type:

Article

Temperature-Dependent Gentamicin Resistance of Francisella tularensis is Mediated by Uptake Modulation.

Published in:

Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00037

By:

Loughman, Kathleen;
Hall, Jesse;
Knowlton, Samantha;
Sindeldecker, Devin;
Gilson, Tricia;
Schmitt, Deanna M.;
Birch, James W.-M.;
Gajtka, Tara;
Florjanczyk, Aleksandr;
Ingram, Jenna;
Bakshi, Chandra S.;
Horzempa, Joseph;
Sjostedt, Anders;
Maurin, Max

Publication type:

Article

Ecological divergence of syntopic marine bacterial species is shaped by gene content and expression.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2023, v. 17, n. 6, p. 813, doi. 10.1038/s41396-023-01390-4

By:

Nowinski, Brent;
Feng, Xiaoyuan;
Preston, Christina M.;
Birch, James M.;
Luo, Haiwei;
Whitman, William B.;
Moran, Mary Ann

Publication type:

Article

High‐frequency and long‐term observations of eDNA from imperiled salmonids in a coastal stream: Temporal dynamics, relationships with environmental factors, and comparisons with conventional observations.

Published in:

Environmental DNA, 2022, v. 4, n. 4, p. 776, doi. 10.1002/edn3.293

By:

Searcy, Ryan T.;
Boehm, Alexandria B.;
Weinstock, Chloe;
Preston, Christina M.;
Jensen, Scott;
Roman, Brent;
Birch, James M.;
Scholin, Christopher A.;
Van Houtan, Kyle S.;
Kiernan, Joseph D.;
Yamahara, Kevan M.

Publication type:

Article

Autonomous samplers and environmental DNA metabarcoding: sampling day and primer choice have greatest impact on fish detection probabilities.

Published in:

Metabarcoding & Metagenomics, 2024, n. 8, p. 1, doi. 10.3897/mbmg.8.122375

By:

Jones, Devin N.;
Augustine, Ben C.;
Hutchins, Patrick;
Birch, James M.;
Yamahara, Kevan M.;
Jensen, Scott;
Richardson, Rodney;
Trott, Regina;
Campbell, James R.;
Barnhart, Elliott;
Sepulveda, Adam J.

Publication type:

Article

Recovery and identification of Pseudo-nitzschia (Bacillariophyceae) frustules from natural samples acquired using the environmental sample processor.

Published in:

Journal of Phycology, 2016, v. 52, n. 1, p. 135, doi. 10.1111/jpy.12369

By:

Bowers, Holly A.;
Marin, Roman;
Birch, James M.;
Scholin, Christopher A.;
Doucette, Gregory J.;
Kroth, P.

Publication type:

Article

Spanwise flow and the attachment of the leading-edge vortex on insect wings.

Published in:

Nature, 2001, v. 412, n. 6848, p. 729, doi. 10.1038/35089071

By:

Birch, James M.;
Dickinson, Michael H.

Publication type:

Article

A system of coordinated autonomous robots for Lagrangian studies of microbes in the oceanic deep chlorophyll maximum.

Published in:

Science Robotics, 2021, v. 6, n. 50, p. 1, doi. 10.1126/scirobotics.abb9138

By:

Zhang, Yanwu;
Ryan, John P.;
Hobson, Brett W.;
Kieft, Brian;
Romano, Anna;
Barone, Benedetto;
Preston, Christina M.;
Roman, Brent;
Raanan, Ben-Yair;
Pargett, Douglas;
Dugenne, Mathilde;
White, Angelicque E.;
Freitas, Fernanda Henderikx;
Poulos, Steve;
Wilson, Samuel T.;
DeLong, Edward F.;
Karl, David M.;
Birch, James M.;
Bellingham, James G.;
Scholin, Christopher A.

Publication type:

Article

Robotic environmental DNA bio-surveillance of freshwater health.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-71304-3

By:

Sepulveda, Adam J.;
Birch, James M.;
Barnhart, Elliott P.;
Merkes, Christopher M.;
Yamahara, Kevan M.;
Marin III, Roman;
Kinsey, Stacy M.;
Wright, Peter R.;
Schmidt, Christian

Publication type:

Article

Using a long‐range autonomous underwater vehicle to find and sample harmful algal blooms in Lake Erie.

Published in:

Limnology & Oceanography, Methods, 2024, v. 22, n. 7, p. 473, doi. 10.1002/lom3.10621

By:

Zhang, Yanwu;
Kieft, Brian;
Hobson, Brett W.;
Raanan, Ben‐Yair;
Ussler, William;
Preston, Christina M.;
Errera, Reagan M.;
Den Uyl, Paul A.;
Woude, Andrea Vander;
Doucette, Gregory J.;
Ruberg, Steven A.;
Goodwin, Kelly D.;
Birch, James M.;
Scholin, Christopher A.

Publication type:

Article

Subsurface seeding of surface harmful algal blooms observed through the integration of autonomous gliders, moored environmental sample processors, and satellite remote sensing in southern California.

Published in:

Limnology & Oceanography, 2015, v. 60, n. 3, p. 754, doi. 10.1002/lno.10082

By:

Seegers, Bridget N.;
Birch, James M.;
Marin, Roman;
Scholin, Chris A.;
Caron, David A.;
Seubert, Erica L.;
Howard, Meredith D. A.;
Robertson, George L.;
Jones, Burton H.

Publication type:

Article

A Raman spectral reference library of potential anthropogenic and biological ocean polymers.

Published in:

Scientific Data, 2022, v. 9, n. 1, p. 1, doi. 10.1038/s41597-022-01883-5

By:

Miller, Emily A.;
Yamahara, Kevan M.;
French, Chris;
Spingarn, Neil;
Birch, James M.;
Van Houtan, Kyle S.

Publication type:

Article

An Autonomous Platform for Near Real-Time Surveillance of Harmful Algae and Their Toxins in Dynamic Coastal Shelf Environments.

Published in:

Journal of Marine Science & Engineering, 2021, v. 9, n. 3, p. 336, doi. 10.3390/jmse9030336

By:

Moore, Stephanie K.;
Mickett, John B.;
Doucette, Gregory J.;
Adams, Nicolaus G.;
Mikulski, Christina M.;
Birch, James M.;
Roman, Brent;
Michel-Hart, Nicolas;
Newton, Jan A.;
Costa, Pedro Reis

Publication type:

Article