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Non-perennial rivers and streams in extreme hydrological conditions--comparing the effectiveness of amplicon sequencing and digital microscopy for diatom biodiversity appraisal.
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- Frontiers in Ecology & Evolution, 2024, p. 01, doi. 10.3389/fevo.2024.1355018
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- Article
Revealing Interactions between Temperature and Salinity and Their Effects on the Growth of Freshwater Diatoms by Empirical Modelling.
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- Phycology, 2023, v. 3, n. 4, p. 413, doi. 10.3390/phycology3040028
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- Article
Virtuelle digitale Lichtmikroskopie in der Lehre.
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- Biologie in unserer Zeit, 2023, v. 53, n. 2, p. 164
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- Article
Improving deep learning-based segmentation of diatoms in gigapixel-sized virtual slides by object-based tile positioning and object integrity constraint.
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- PLoS ONE, 2023, v. 17, n. 2, p. 1, doi. 10.1371/journal.pone.0272103
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- Article
A Digital Light Microscopic Method for Diatom Surveys Using Embedded Acid-Cleaned Samples.
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- Water (20734441), 2022, v. 14, n. 20, p. N.PAG, doi. 10.3390/w14203332
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- Article
The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25646-9
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- Article
Epiphytic diatom community structure and richness is determined by macroalgal host and location in the South Shetland Islands (Antarctica).
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- PLoS ONE, 2021, v. 16, n. 4, p. 1, doi. 10.1371/journal.pone.0250629
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- Article
First Evidence of the Toxin Domoic Acid in Antarctic Diatom Species.
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- Toxins, 2021, v. 13, n. 2, p. 93, doi. 10.3390/toxins13020093
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- Article
Adaptive divergence across Southern Ocean gradients in the pelagic diatom Fragilariopsis kerguelensis.
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- Molecular Ecology, 2020, v. 29, n. 24, p. 4913, doi. 10.1111/mec.15554
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- Article
Repositories for Taxonomic Data: Where We Are and What is Missing.
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- Systematic Biology, 2020, v. 69, n. 6, p. 1231, doi. 10.1093/sysbio/syaa026
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- Article
Deep learning-based diatom taxonomy on virtual slides.
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- Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-71165-w
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- Article
A complete digitization of German herbaria is possible, sensible and should be started now.
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- Research Ideas & Outcome Journal, 2020, p. 1, doi. 10.3897/rio.6.e50675
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- Article
A complete digitization of German herbaria is possible, sensible and should be started now.
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- Research Ideas & Outcome Journal, 2020, v. 6, p. 1, doi. 10.3897/rio.6.e50675
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- Publication type:
- Article
Quantitative comparison of taxa and taxon concepts in the diatom genus Fragilariopsis: a case study on using slide scanning, multiexpert image annotation, and image analysis in taxonomy<sup>1</sup>.
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- Journal of Phycology, 2018, v. 54, n. 5, p. 703, doi. 10.1111/jpy.12767
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- Article
Large-Scale Permanent Slide Imaging and Image Analysis for Diatom Morphometrics.
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- Applied Sciences (2076-3417), 2017, v. 7, n. 4, p. 330, doi. 10.3390/app7040330
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- Article
In situ expression of eukaryotic ice-binding proteins in microbial communities of Arctic and Antarctic sea ice.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 11, p. 2537, doi. 10.1038/ismej.2015.43
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- Article
Potential effects of climate change on the distribution range of the main silicate sinker of the Southern Ocean.
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- Ecology & Evolution (20457758), 2014, v. 4, n. 16, p. 3147, doi. 10.1002/ece3.1138
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- Article
SHERPA: an image segmentation and outline feature extraction tool for diatoms and other objects.
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- BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-218
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- Article
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing.
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- PLoS Biology, 2014, v. 12, n. 6, p. 1, doi. 10.1371/journal.pbio.1001889
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- Article
High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 7, p. 1322, doi. 10.1038/ismej.2013.32
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- Article
Putative Monofunctional Type I Polyketide Synthase Units: A Dinoflagellate-Specific Feature?
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- PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0048624
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- Article
The model marine diatom Thalassiosira pseudonana likely descended from a freshwater ancestor in the genus Cyclotella.
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- BMC Evolutionary Biology, 2011, v. 11, n. 1, p. 125, doi. 10.1186/1471-2148-11-125
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- Article
Average genome size: a potential source of bias in comparative metagenomics.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 8, p. 1075, doi. 10.1038/ismej.2010.29
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- Article
The Ectocarpus genome and the independent evolution of multicellularity in brown algae.
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- Nature, 2010, v. 465, n. 7298, p. 617, doi. 10.1038/nature09016
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- Article
PHENOTYPIC VARIATION AND GENOTYPIC DIVERSITY IN A PLANKTONIC POPULATION OF THE TOXIGENIC MARINE DINOFLAGELLATE ALEXANDRIUM TAMARENSE (DINOPHYCEAE).
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- Journal of Phycology, 2010, v. 46, n. 1, p. 18, doi. 10.1111/j.1529-8817.2009.00767.x
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- Article
Implications of life-history transitions on the population genetic structure of the toxigenic marine dinoflagellate Alexandrium tamarense.
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- Molecular Ecology, 2009, v. 18, n. 10, p. 2122, doi. 10.1111/j.1365-294X.2009.04165.x
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- Article
STAMP: Extensions to the STADEN sequence analysis package for high throughput interactive microsatellite marker design.
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- BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-41
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- Article
The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
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- 2008
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- Letter
PhyloGena—a user-friendly system for automated phylogenetic annotation of unknown sequences.
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- Bioinformatics, 2007, v. 23, n. 7, p. 793, doi. 10.1093/bioinformatics/btm016
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- Article
Bacterial activities in the sediment of Lake Velencei, Hungary.
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- Hydrobiologia, 2003, v. 506-509, p. 721, doi. 10.1023/B:HYDR.0000008586.30395.f2
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- Article