Works by Berriman, Matthew

Results: 137
    1

    Phosphoinositide Metabolism Links cGMP-Dependent Protein Kinase G to Essential Ca<sup>2+</sup> Signals at Key Decision Points in the Life Cycle of Malaria Parasites.

    Published in:
    PLoS Biology, 2014, v. 12, n. 3, p. 1, doi. 10.1371/journal.pbio.1001806
    By:
    • Brochet, Mathieu;
    • Collins, Mark O.;
    • Smith, Terry K.;
    • Thompson, Eloise;
    • Sebastian, Sarah;
    • Volkmann, Katrin;
    • Schwach, Frank;
    • Chappell, Lia;
    • Gomes, Ana Rita;
    • Berriman, Matthew;
    • Rayner, Julian C.;
    • Baker, David A.;
    • Choudhary, Jyoti;
    • Billker, Oliver
    Publication type:
    Article
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    Dynamics of host immune response development during Schistosoma mansoni infection.

    Published in:
    Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2022.906338
    By:
    • Costain, Alice H.;
    • Phythian-Adams, Alexander T.;
    • Colombo, Stefano A. P.;
    • Marley, Angela K.;
    • Owusu, Christian;
    • Cook, Peter C.;
    • Brown, Sheila L.;
    • Webb, Lauren M.;
    • Lundie, Rachel J.;
    • Borger, Jessica G.;
    • Smits, Hermelijn H.;
    • Berriman, Matthew;
    • MacDonald, Andrew S.
    Publication type:
    Article
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    Hot and sexy moulds!

    Published in:
    Nature Reviews Microbiology, 2006, v. 4, n. 4, p. 244, doi. 10.1038/nrmicro1388
    By:
    • Pain, Arnab;
    • Böhme, Ulrike;
    • Berriman, Matthew
    Publication type:
    Article
    8

    Genome watch: A feast of protozoan genomes.

    Published in:
    Nature Reviews Microbiology, 2005, v. 3, n. 9, p. 670, doi. 10.1038/nrmicro1237
    By:
    • Hertz-Fowler, Christiane;
    • Berriman, Matthew;
    • Pain, Arnab
    Publication type:
    Article
    9
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    Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus.

    Published in:
    Nature, 2005, v. 438, n. 7071, p. 1151, doi. 10.1038/nature04332
    By:
    • Nierman, William C.;
    • Pain, Arnab;
    • Anderson, Michael J.;
    • Wortman, Jennifer R.;
    • Kim, H. Stanley;
    • Arroyo, Javier;
    • Berriman, Matthew;
    • Abe, Keietsu;
    • Archer, David B.;
    • Bermejo, Clara;
    • Bennett, Joan;
    • Bowyer, Paul;
    • Chen, Dan;
    • Collins, Matthew;
    • Coulsen, Richard;
    • Davies, Robert;
    • Dyer, Paul S.;
    • Farman, Mark;
    • Fedorova, Nadia;
    • Fedorova, Natalie
    Publication type:
    Article
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    RATT: Rapid Annotation Transfer Tool.

    Published in:
    Nucleic Acids Research, 2011, v. 39, n. 9, p. e57, doi. 10.1093/nar/gkq1268
    By:
    • Otto, Thomas D.;
    • Dillon, Gary P.;
    • Degrave, Wim S.;
    • Berriman, Matthew
    Publication type:
    Article
    15

    TriTrypDB: a functional genomic resource for the Trypanosomatidae.

    Published in:
    Nucleic Acids Research, 2010, v. 38, p. D457, doi. 10.1093/nar/gkp851
    By:
    • Aslett, Martin;
    • Aurrecoechea, Cristina;
    • Berriman, Matthew;
    • Brestelli, John;
    • Brunk, Brian P.;
    • Carrington, Mark;
    • Depledge, Daniel P.;
    • Fischer, Steve;
    • Gajria, Bindu;
    • Xin Gao;
    • Gardner, Malcolm J.;
    • Gingle, Alan;
    • Grant, Greg;
    • Harb, Omar S.;
    • Heiges, Mark;
    • Hertz-Fowler, Christiane;
    • Houston, Robin;
    • Innamorato, Frank;
    • Iodice, John;
    • Kissinger, Jessica C.
    Publication type:
    Article
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    GeneDB: a resource for prokaryotic and eukaryotic organisms.

    Published in:
    Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d339
    By:
    • Hertz‐Fowler, Christiane;
    • Peacock, Chris S.;
    • Wood, Valerie;
    • Aslett, Martin;
    • Kerhornou, Arnaud;
    • Mooney, Paul;
    • Tivey, Adrian;
    • Berriman, Matthew;
    • Hall, Neil;
    • Rutherford, Kim;
    • Parkhill, Julian;
    • Ivens, Alasdair C.;
    • Rajandream, Marie‐Adele;
    • Barrell, Bart
    Publication type:
    Article
    19

    The DNA sequence of chromosome I of an African trypanosome: gene content, chromosome organisation, recombination and polymorphism.

    Published in:
    Nucleic Acids Research, 2003, v. 31, n. 16, p. 4864, doi. 10.1093/nar/gkg674
    By:
    • Hall, Neil;
    • Berriman, Matthew;
    • Lennard, Nicola J.;
    • Harris, Barbara R.;
    • Hertz‐Fowler, Christiane;
    • Bart‐Delabesse, Emmanuelle N.;
    • Gerrard, Caroline S.;
    • Atkin, Rebecca J.;
    • Barron, Andrew J.;
    • Bowman, Sharen;
    • Bray‐Allen, Sarah P.;
    • Bringaud, Frédéric;
    • Clark, Louise N.;
    • Corton, Craig H.;
    • Cronin, Ann;
    • Davies, Robert;
    • Doggett, Jonathon;
    • Fraser, Audrey;
    • Grüter, Eric;
    • Hall, Sarah
    Publication type:
    Article
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    Using ChEMBL to Complement Schistosome Drug Discovery.

    Published in:
    Pharmaceutics, 2023, v. 15, n. 5, p. 1359, doi. 10.3390/pharmaceutics15051359
    By:
    • Padalino, Gilda;
    • Coghlan, Avril;
    • Pagliuca, Giampaolo;
    • Forde-Thomas, Josephine E.;
    • Berriman, Matthew;
    • Hoffmann, Karl F.
    Publication type:
    Article
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    A Cell-surface Phylome for African Trypanosomes.

    Published in:
    PLoS Neglected Tropical Diseases, 2013, v. 7, n. 3, p. 1, doi. 10.1371/journal.pntd.0002121
    By:
    • Jackson, Andrew P.;
    • Allison, Harriet C.;
    • Barry, J. David;
    • Field, Mark C.;
    • Hertz-Fowler, Christiane;
    • Berriman, Matthew
    Publication type:
    Article
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    A Cell-surface Phylome for African Trypanosomes.

    Published in:
    PLoS Neglected Tropical Diseases, 2013, v. 7, n. 3, p. 1, doi. 10.1371/journal.pntd.0002121
    By:
    • Jackson, Andrew P.;
    • Allison, Harriet C.;
    • Barry, J. David;
    • Field, Mark C.;
    • Hertz-Fowler, Christiane;
    • Berriman, Matthew
    Publication type:
    Article
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    Genome variation and evolution of the malaria parasite Plasmodium falciparum.

    Published in:
    Nature Genetics, 2007, v. 39, n. 1, p. 120, doi. 10.1038/ng1931
    By:
    • Jeffares, Daniel C.;
    • Pain, Arnab;
    • Berry, Andrew;
    • Cox, Anthony V.;
    • Stalker, James;
    • Ingle, Catherine E.;
    • Thomas, Alan;
    • Quail, Michael A.;
    • Siebenthall, Kyle;
    • Uhlemann, Anne-Catrin;
    • Kyes, Sue;
    • Krishna, Sanjeev;
    • Newbold, Chris;
    • Dermitzakis, Emmanouil T.;
    • Berriman, Matthew
    Publication type:
    Article
    35

    Population genomic and evolutionary modelling analyses reveal a single major QTL for ivermectin drug resistance in the pathogenic nematode, Haemonchus contortus.

    Published in:
    BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-5592-6
    By:
    • Doyle, Stephen R.;
    • Holroyd, Nancy;
    • Tracey, Alan;
    • Berriman, Matthew;
    • Cotton, James A.;
    • Martinelli, Axel;
    • Illingworth, Christopher J. R.;
    • Laing, Roz;
    • Devaney, Eileen;
    • Bartley, David J.;
    • Morrison, Alison A.;
    • Redman, Elizabeth;
    • Rezansoff, Andrew;
    • Gilleard, John S.;
    • Sargison, Neil
    Publication type:
    Article
    36
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    A Human-Curated Annotation of the Candida albicans Genome.

    Published in:
    PLoS Genetics, 2005, v. 1, n. 1, p. 36, doi. 10.1371/journal.pgen.0010001
    By:
    • Braun, Burkhard R.;
    • Van het Hoog, Marco;
    • D'Enfert, Christophe;
    • Martchenko, Mikhail;
    • Dungan, Jan;
    • Kuo, Alan;
    • Inglis, Diane O.;
    • Uhl, M. Andrew;
    • Hogues, Hervé;
    • Berriman, Matthew;
    • Lorenz, Michael;
    • Levitin, Anastasia;
    • Oberholzer, Ursula;
    • Bachewich, Catherine;
    • Harcus, Doreen;
    • Marcil, Anne;
    • Dignard, Daniel;
    • Iouk, Tatiana;
    • Zito, Rosa;
    • Frangeul, Lionel
    Publication type:
    Article
    38

    ACT: the Artemis comparison tool.

    Published in:
    Bioinformatics, 2005, v. 21, n. 16, p. 3422, doi. 10.1093/bioinformatics/bti553
    By:
    • Tim J. Carver;
    • Kim M. Rutherford;
    • Matthew Berriman;
    • Marie-Adele Rajandream;
    • Barclay G. Barrell;
    • Julian Parkhill
    Publication type:
    Article
    39

    A Genome Resequencing-Based Genetic Map Reveals the Recombination Landscape of an Outbred Parasitic Nematode in the Presence of Polyploidy and Polyandry.

    Published in:
    Genome Biology & Evolution, 2018, v. 10, n. 2, p. 396, doi. 10.1093/gbe/evx269
    By:
    • Doyle, Stephen R.;
    • Laing, Roz;
    • Bartley, David J.;
    • Britton, Collette;
    • Chaudhry, Umer;
    • Gilleard, John S.;
    • Holroyd, Nancy;
    • Mable, Barbara K.;
    • Maitland, Kirsty;
    • Morrison, Alison A.;
    • Tait, Andy;
    • Tracey, Alan;
    • Berriman, Matthew;
    • Devaney, Eileen;
    • Cotton, James A.;
    • Sargison, Neil D.
    Publication type:
    Article
    40

    A drug repurposing screen for whipworms informed by comparative genomics.

    Published in:
    PLoS Neglected Tropical Diseases, 2023, v. 17, n. 9, p. 1, doi. 10.1371/journal.pntd.0011205
    By:
    • Coghlan, Avril;
    • Partridge, Frederick A.;
    • Duque-Correa, María Adelaida;
    • Rinaldi, Gabriel;
    • Clare, Simon;
    • Seymour, Lisa;
    • Brandt, Cordelia;
    • Mkandawire, Tapoka T.;
    • McCarthy, Catherine;
    • Holroyd, Nancy;
    • Nick, Marina;
    • Brown, Anwen E.;
    • Tonitiwong, Sirapat;
    • Sattelle, David B.;
    • Berriman, Matthew
    Publication type:
    Article
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    Mapping immune variation and var gene switching in naive hosts infected with Plasmodium falciparum.

    Published in:
    eLife, 2021, p. 1, doi. 10.7554/eLife.62800
    By:
    • Milne, Kathryn;
    • Ivens, Alasdair;
    • Reid, Adam J.;
    • Lotkowska, Magda E.;
    • O'Toole, Aine;
    • Sankaranarayanan, Geetha;
    • Sandoval, Diana Munoz;
    • Nahrendorf, Wiebke;
    • Regnault, Clement;
    • Edwards, Nick J.;
    • Silk, Sarah E.;
    • Payne, Ruth O.;
    • Minassian, Angela M.;
    • Venkatraman, Navin;
    • Sanders, Mandy J.;
    • Hill, Adrian V. S.;
    • Barrett, Michael;
    • Berriman, Matthew;
    • Draper, Simon J.;
    • Rowe, J. Alexandra
    Publication type:
    Article
    46

    Population genomics of ancient and modern Trichuris trichiura.

    Published in:
    Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31487-x
    By:
    • Doyle, Stephen R.;
    • Søe, Martin Jensen;
    • Nejsum, Peter;
    • Betson, Martha;
    • Cooper, Philip J.;
    • Peng, Lifei;
    • Zhu, Xing-Quan;
    • Sanchez, Ana;
    • Matamoros, Gabriela;
    • Sandoval, Gustavo Adolfo Fontecha;
    • Cutillas, Cristina;
    • Tchuenté, Louis-Albert Tchuem;
    • Mekonnen, Zeleke;
    • Ame, Shaali M.;
    • Namwanje, Harriet;
    • Levecke, Bruno;
    • Berriman, Matthew;
    • Fredensborg, Brian Lund;
    • Kapel, Christian Moliin Outzen
    Publication type:
    Article
    47

    Morphological and genomic characterisation of the Schistosoma hybrid infecting humans in Europe reveals admixture between Schistosoma haematobium and Schistosoma bovis.

    Published in:
    PLoS Neglected Tropical Diseases, 2021, v. 15, n. 12, p. 1, doi. 10.1371/journal.pntd.0010062
    By:
    • Kincaid-Smith, Julien;
    • Tracey, Alan;
    • de Carvalho Augusto, Ronaldo;
    • Bulla, Ingo;
    • Holroyd, Nancy;
    • Rognon, Anne;
    • Rey, Olivier;
    • Chaparro, Cristian;
    • Oleaga, Ana;
    • Mas-Coma, Santiago;
    • Allienne, Jean-François;
    • Grunau, Christoph;
    • Berriman, Matthew;
    • Boissier, Jérôme;
    • Toulza, Eve
    Publication type:
    Article
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