Works by Berger, Ruud

Results: 40

The copper-transporting capacity of ATP7A mutants associated with Menkes disease is ameliorated by COMMD1 as a result of improved protein expression.
Published in:
Cellular & Molecular Life Sciences, 2012, v. 69, n. 1, p. 149, doi. 10.1007/s00018-011-0743-1
By:
- Vonk, Willianne;
- Bie, Prim;
- Wichers, Catharina;
- den Berghe, Peter;
- Plaats, Rozemarijn;
- Berger, Ruud;
- Wijmenga, Cisca;
- Klomp, Leo;
- Sluis, Bart
Publication type:
Article
Mutation analysis for prenatal diagnosis of hereditary tyrosinaemia type 1.
Published in:
Prenatal Diagnosis, 1997, v. 17, n. 10, p. 964, doi. 10.1002/(SICI)1097-0223(199710)17:10<964::AID-PD164>3.0.CO;2-6
By:
- Mustonen, Aki;
- Ploos Van Amstel, Hans Kristian;
- Berger, Ruud;
- Salo, Matti K.;
- Viinikka, Lasse;
- Simola, Kalle O. J.
Publication type:
Article
Fumarylacetoacetase mutations in tyrosinaemia type I.
Published in:
Human Mutation, 1996, v. 7, n. 3, p. 239, doi. 10.1002/(SICI)1098-1004(1996)7:3<239::AID-HUMU8>3.0.CO;2-5
By:
- Rootwelt, Helge;
- Høie, Kari;
- Berger, Ruud;
- Kvittingen, Eli Anne
Publication type:
Article
Metabolic characterization of the natural progression of chronic hepatitis B.
Published in:
Genome Medicine, 2016, v. 8, p. 1, doi. 10.1186/s13073-016-0318-8
By:
- Schoeman, Johannes C.;
- Jun Hou;
- Harms, Amy C.;
- Vreeken, Rob J.;
- Berger, Ruud;
- Hankemeier, Thomas;
- Boonstra, Andre
Publication type:
Article
Assessing the metabolic effects of prednisolone in healthy volunteers using urine metabolic profiling.
Published in:
Genome Medicine, 2012, v. 4, n. 11, p. 1, doi. 10.1186/gm395
By:
- Ellero-Simatos, Sandrine;
- Szymańska, Ewa;
- Rullmann, Ton;
- Dokter, Wim HA;
- Ramaker, Raymond;
- Berger, Ruud;
- Van Iersel, Thijs MP;
- Smilde, Age K;
- Hankemeier, Thomas;
- Alkema, Wynand
Publication type:
Article
Hypertriglyceridemia in patients with chronic renal failure: Possible mechanisms.
Published in:
Kidney International, 2003, v. 63, p. S121, doi. 10.1046/j.1523-1755.63.s84.34.x
By:
- Prinsen, Berthil H.C.M.T.;
- de Sain-van der Velden, Monique G.M.;
- de Koning, Eelco J.P.;
- Koomans, Hein A.;
- Berger, Ruud;
- Rabelink, Ton J.
Publication type:
Article
Homocysteine and methionine metabolism in ESRD: A stable isotope study.
Published in:
Kidney International, 1999, v. 56, n. 3, p. 1064, doi. 10.1046/j.1523-1755.1999.00624.x
By:
- Van Guldener, Coen;
- Kulik, Wim;
- Berger, Ruud;
- Dijkstra, Denise A.;
- Jakobs, Cornelis;
- Reijngoud, Dirk-Jan;
- Donker, Ab J.M.;
- Stehouwer, Coen D.A.;
- De Meer, Kees
Publication type:
Article
Fetal Metabolic Stress Disrupts Immune Homeostasis and Induces Proinflammatory Responses in Human Immunodeficiency Virus Type 1- and Combination Antiretroviral Therapy-Exposed Infants.
Published in:
2017
By:
- Schoeman, Johannes C.;
- Moutloatse, Gontse P.;
- Harms, Amy C.;
- Vreeken, Rob J.;
- Scherpbier, Henriette J.;
- Van Leeuwen, Liesbeth;
- Kuijpers, Taco W.;
- Reinecke, Carools J.;
- Berger, Ruud;
- Hankemeier, Thomas;
- Bunders, Madeleine J.
Publication type:
journal article
The serine/threonine phosphatase PPM1B (PP2Cß) selectively modulates PPARγ activity.
Published in:
Biochemical Journal, 2013, v. 451, n. 1, p. 45, doi. 10.1042/BJ20121113
By:
- TASDELEN, Ismayil;
- VAN BEEKUM, Olivier;
- GORBENKO, Olena;
- FLESKENS, Veerle;
- VAN DEN BROEK, Niels J. F.;
- KOPPEN, Arjen;
- HAMERS, Nicole;
- BERGER, Ruud;
- COFFER, Paul J.;
- BRENKMAN, Arjan B.;
- KALKHOVEN, Eric
Publication type:
Article
Early adipogenesis is regulated through USP7-mediated deubiquitination of the histone acetyltransferase TIP60.
Published in:
Nature Communications, 2013, v. 4, n. 10, p. 2656, doi. 10.1038/ncomms3656
By:
- Gao, Yuan;
- Koppen, Arjen;
- Rakhshandehroo, Maryam;
- Tasdelen, Ismayil;
- van de Graaf, Stan F.;
- van Loosdregt, Jorg;
- van Beekum, Olivier;
- Hamers, Nicole;
- van Leenen, Dik;
- Berkers, Celia R.;
- Berger, Ruud;
- Holstege, Frank C.P.;
- Coffer, Paul J.;
- Brenkman, Arjan B.;
- Ovaa, Huib;
- Kalkhoven, Eric
Publication type:
Article
Reply.
Published in:
Annals of Neurology, 2009, v. 65, n. 4, p. 484, doi. 10.1002/ana.21701
By:
- Engbers, Hannelie M.;
- Berger, Ruud;
- van Hasselt, Peter;
- de Koning, Tom;
- de Sain-van der Velden, Monique G. M.;
- Kroes, Hester;
- Visser, Gepke
Publication type:
Article
Yield of additional metabolic studies in neurodevelopmental disorders.
Published in:
Annals of Neurology, 2008, v. 64, n. 2, p. 212, doi. 10.1002/ana.21435
By:
- Engbers, Hannelie M.;
- Berger, Ruud;
- van Hasselt, Peter;
- de Koning, Tom;
- de Sain-van der Velden, Monique G. M.;
- Kroes, Hester Y.;
- Visser, Gepke
Publication type:
Article
D‐serine in the developing human central nervous system.
Published in:
Annals of Neurology, 2006, v. 60, n. 4, p. 476
By:
- Sabine A. Fuchs;
- Lambertus Dorland;
- Monique G. De Sain‐Van Der Velden;
- Margriet Hendriks;
- Leo W. J. Klomp;
- Ruud Berger;
- Tom J. De Koning
Publication type:
Article
Global profiling of the muscle metabolome: method optimization, validation and application to determine exercise-induced metabolic effects.
Published in:
Metabolomics, 2015, v. 11, n. 2, p. 271, doi. 10.1007/s11306-014-0701-7
By:
- Alves, Rodrigo;
- Dane, Adrie;
- Harms, Amy;
- Strassburg, Katrin;
- Seifar, Reza;
- Verdijk, Lex;
- Kersten, Sander;
- Berger, Ruud;
- Hankemeier, Thomas;
- Vreeken, Rob
Publication type:
Article
Rapid metabolic screening of early zebrafish embryogenesis based on direct infusion-nanoESI-FTMS.
Published in:
Metabolomics, 2013, v. 9, n. 4, p. 864, doi. 10.1007/s11306-012-0493-6
By:
- Raterink, Robert-Jan;
- Kloet, Frans;
- Li, Jiajie;
- Wattel, Niels;
- Schaaf, Marcel;
- Spaink, Herman;
- Berger, Ruud;
- Vreeken, Robert;
- Hankemeier, Thomas
Publication type:
Article
Beneficial effects of L-serine and glycine in the management of seizures in 3-phosphoglycerate dehydrogenase deficiency.
Published in:
1998
By:
- de Koning, Tom J.;
- Duran, Marinus;
- Dorland, Lambertus;
- Gooskens, Rob;
- van Schaftingen, Emile;
- Jaeken, Jaak;
- Blau, Nenad;
- Berger, Ruud;
- Poll-The, Bwee Tien;
- de Koning, T J;
- Duran, M;
- Dorland, L;
- Gooskens, R;
- Van Schaftingen, E;
- Jaeken, J;
- Blau, N;
- Berger, R;
- Poll-The, B T
Publication type:
journal article
Quantification of in vivo oxidative damage in Caenorhabditis elegans during aging by endogenous F3-isoprostane measurement.
Published in:
Aging Cell, 2013, v. 12, n. 2, p. 214, doi. 10.1111/acel.12043
By:
- Labuschagne, Christiaan F.;
- Stigter, Edwin C. A.;
- Hendriks, Margriet M. W. B.;
- Berger, Ruud;
- Rokach, Joshua;
- Korswagen, Hendrik C.;
- Brenkman, Arjan B.
Publication type:
Article
X-linked liver glycogenosis: localization and isolation of a candidate gene.
Published in:
Human Molecular Genetics, 1993, v. 2, n. 5, p. 583
By:
- Hendrickx, Jan;
- Coucke, Paul;
- Bossuyt, Paul;
- Wauters, Jan;
- Raeymaekers, Peter;
- Marchau, Fabienne;
- Smit, G. Peter A.;
- Stolte, Irene;
- Sardharwalla, I.B.;
- Berthelot, Jacques;
- Van den Bergh, Inge;
- Berger, Ruud;
- Van Broeckhoven, Christine;
- Baussan, Christiane;
- Wapenaar, Martin;
- John, Fernandes;
- Willems, Patrick J.
Publication type:
Article
Neurotransmitters in 3-phosphoglycerate dehydrogenase deficiency.
Published in:
2000
By:
- de Koning, Tom J;
- Duran, Marinus;
- Dorland, Lambertus;
- Jakobs, Cornelis;
- Wevers, Ron A;
- Berger, Ruud;
- Poll-The, Bwee-Tien;
- de Koning, T J;
- Duran, M;
- Dorland, L;
- Jakobs, C;
- Wevers, R A;
- Berger, R;
- Poll-The, B T
Publication type:
Case Study
Insulin-like growth factors and leucine kinetics during exercise training in children with cystic fibrosis.
Published in:
2001
By:
- Gulmans, Vincent;
- van der Laag, Johannes;
- Wattimena, Darcos;
- van Doorn, Jaap;
- Oostveen, Dorothe;
- Berger, Ruud;
- de Meer, Kees;
- Gulmans, V;
- van der Laag, J;
- Wattimena, D;
- van Doorn, J;
- Oostveen, D;
- Berger, R;
- de Meer, K
Publication type:
journal article
P18 is a tumor suppressor gene involved in human medullary thyroid carcinoma and pheochromocytoma development.
Published in:
International Journal of Cancer, 2009, v. 124, n. 2, p. 339, doi. 10.1002/ijc.23977
By:
- van Veelen, Wendy;
- Klompmaker, Rob;
- Gloerich, Martijn;
- van Gasteren, Carola J.R.;
- Kalkhoven, Eric;
- Berger, Ruud;
- Lips, Cornelis J.M.;
- Medema, Rene H.;
- Höppener, Jo W.M.;
- Acton, Dennis S.
Publication type:
Article
Renal proximal tubular cells acquire resistance to cell death stimuli in mice with hereditary tyrosinemia type 1.
Published in:
Kidney International, 2004, v. 66, n. 3, p. 990, doi. 10.1111/j.1523-1755.2004.00788.x
By:
- Luijerink, Marjanka C.;
- van Beurden, Ellen A. C. M.;
- Malingré, Helga E. M.;
- Jacobs, Saskal M. M.;
- Grompe, Markus;
- Klomp, Leo W. J.;
- Berger, Ruud;
- van den Berg, Inge E. T.
Publication type:
Article
DIALYSIS - TRANSPLANTATION A broad-based metabolic approach to study VLDL apoB100 metabolism in patients with ESRD and patients treated with peritoneal dialysis.
Published in:
Kidney International, 2004, v. 65, n. 3, p. 1064, doi. 10.1111/j.1523-1755.2004.00466.x
By:
- H.C.M.T., Prinsen, Berthil;
- Rabelink, Ton J.;
- Romijn, Johannes A.;
- Bisschop, Peter H.;
- de Barse, Martina M.J.;
- de Boer, José;
- van Haeften, Timon W.;
- Hugh, P.;
- Barrett, R.;
- Berger, Ruud;
- de Sain-Van Der Velden, Monique G.M.
Publication type:
Article
Increased albumin and fibrinogen synthesis rate in patients with chronic renal failure.
Published in:
Kidney International, 2003, v. 64, n. 4, p. 1495, doi. 10.1046/j.1523-1755.2003.00211.x
By:
- Prinsen, Berthil H.C.M.T.;
- Rabelink, Ton J.;
- Beutler, Jaap J.;
- Kaysen, George A.;
- de Boer, Jose;
- Boer, Walther H.;
- Hagen, E. Christiaan;
- Berger, Ruud;
- de Sain-van der Velden, Monique G.M.
Publication type:
Article
Collagen Induced Arthritis in DBA/1J Mice Associates with Oxylipin Changes in Plasma.
Published in:
Mediators of Inflammation, 2015, v. 2015, p. 1, doi. 10.1155/2015/543541
By:
- He, Min;
- van Wijk, Eduard;
- Berger, Ruud;
- Wang, Mei;
- Strassburg, Katrin;
- Schoeman, Johannes C.;
- Vreeken, Rob J.;
- van Wietmarschen, Herman;
- Harms, Amy C.;
- Kobayashi, Masaki;
- Hankemeier, Thomas;
- van der Greef, Jan
Publication type:
Article
Development and application of a UHPLC-MS/MS metabolomics based comprehensive systemic and tissue-specific screening method for inflammatory, oxidative and nitrosative stress.
Published in:
Analytical & Bioanalytical Chemistry, 2018, v. 410, n. 10, p. 2551, doi. 10.1007/s00216-018-0912-2
By:
- Schoeman, Johannes C.;
- Harms, Amy C.;
- van Weeghel, Michel;
- Berger, Ruud;
- Vreeken, Rob J.;
- Hankemeier, Thomas
Publication type:
Article
Metabolomics profiling of the free and total oxidised lipids in urine by LC-MS/MS: application in patients with rheumatoid arthritis.
Published in:
Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 23, p. 6307, doi. 10.1007/s00216-016-9742-2
By:
- Fu, Junzeng;
- Schoeman, Johannes;
- Harms, Amy;
- van Wietmarschen, Herman;
- Vreeken, Rob;
- Berger, Ruud;
- Cuppen, Bart;
- Lafeber, Floris;
- van der Greef, Jan;
- Hankemeier, Thomas
Publication type:
Article
Quantitative profiling of oxylipins through comprehensive LC-MS/MS analysis: application in cardiac surgery.
Published in:
Analytical & Bioanalytical Chemistry, 2012, v. 404, n. 5, p. 1413, doi. 10.1007/s00216-012-6226-x
By:
- Strassburg, Katrin;
- Huijbrechts, Annemarie;
- Kortekaas, Kirsten;
- Lindeman, Jan;
- Pedersen, Theresa;
- Dane, Adrie;
- Berger, Ruud;
- Brenkman, Arjan;
- Hankemeier, Thomas;
- Duynhoven, John;
- Kalkhoven, Eric;
- Newman, John;
- Vreeken, Rob
Publication type:
Article
Role of amino acids in rheumatoid arthritis studied by metabolomics.
Published in:
International Journal of Rheumatic Diseases, 2019, v. 22, n. 1, p. 38, doi. 10.1111/1756-185X.13062
By:
- He, Min;
- Harms, Amy C.;
- Wijk, Eduard;
- Wang, Mei;
- Berger, Ruud;
- Koval, Slavik;
- Hankemeier, Thomas;
- Greef, Jan
Publication type:
Article
Increased concentrations of both NMDA receptor co-agonists d-serine and glycine in global ischemia: a potential novel treatment target for perinatal asphyxia.
Published in:
Amino Acids, 2012, v. 43, n. 1, p. 355, doi. 10.1007/s00726-011-1086-9
By:
- Fuchs, Sabine;
- Peeters-Scholte, Cacha;
- Barse, Martina;
- Roeleveld, Martin;
- Klomp, Leo;
- Berger, Ruud;
- Koning, Tom
Publication type:
Article
Discovery of biochemical biomarkers for aggression: A role for metabolomics in psychiatry.
Published in:
American Journal of Medical Genetics. Part B: Neuropsychiatric Genetics, 2016, v. 171B, n. 5, p. 719, doi. 10.1002/ajmg.b.32435
By:
- Hagenbeek, Fiona A.;
- Kluft, Cornelis;
- Hankemeier, Thomas;
- Bartels, Meike;
- Draisma, Harmen H. M.;
- Middeldorp, Christel M.;
- Berger, Ruud;
- Noto, Antonio;
- Lussu, Milena;
- Pool, René;
- Fanos, Vassilios;
- Boomsma, Dorret I.
Publication type:
Article
Hypertriglyceridemia in patients with chronic renal failure: Possible mechanisms.
Published in:
Kidney International Supplement, 2003, n. 84, p. 121, doi. 10.1046/j.1523-1755.63.s84.34.x
By:
- Prinsen, Berthil H.C.M.T.;
- De Sain-Van Der Velden, Monique G.M.;
- De Koning, Eelco J.P.;
- Koomans, Hein A.;
- Berger, Ruud;
- Rabelink, Ton J.
Publication type:
Article
Metabolomics Profiling for Identification of Novel Potential Markers in Early Prediction of Preeclampsia.
Published in:
PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0098540
By:
- Kuc, Sylwia;
- Koster, Maria P. H.;
- Pennings, Jeroen L. A.;
- Hankemeier, Thomas;
- Berger, Ruud;
- Harms, Amy C.;
- Dane, Adrie D.;
- Schielen, Peter C. J. I.;
- Visser, Gerard H. A.;
- Vreeken, Rob J.
Publication type:
Article
Allele Compensation in Tip60+/− Mice Rescues White Adipose Tissue Function In Vivo.
Published in:
PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0098343
By:
- Gao, Yuan;
- Hamers, Nicole;
- Rakhshandehroo, Maryam;
- Berger, Ruud;
- Lough, John;
- Kalkhoven, Eric
Publication type:
Article
The Copper Metabolism MURR1 Domain Protein 1 (COMMD1) Modulates the Aggregation of Misfolded Protein Species in a Client-Specific Manner.
Published in:
PLoS ONE, 2014, v. 9, n. 4, p. 1, doi. 10.1371/journal.pone.0092408
By:
- Vonk, Willianne I. M.;
- Kakkar, Vaishali;
- Bartuzi, Paulina;
- Jaarsma, Dick;
- Berger, Ruud;
- Hofker, Marten H.;
- Klomp, Leo W. J.;
- Wijmenga, Cisca;
- Kampinga, Harm H.;
- van de Sluis, Bart
Publication type:
Article
A Protocol for Quantifying Lipid Peroxidation in Cellular Systems by F2-Isoprostane Analysis.
Published in:
PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0080935
By:
- Labuschagne, Christiaan F.;
- van den Broek, Niels J. F.;
- Postma, Pjotr;
- Berger, Ruud;
- Brenkman, Arjan B.
Publication type:
Article
PPARγ Regulates Expression of Carbohydrate Sulfotransferase 11 (CHST11/C4ST1), a Regulator of LPL Cell Surface Binding
Published in:
PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0064284
By:
- Tasdelen, Ismayil;
- Berger, Ruud;
- Kalkhoven, Eric
Publication type:
Article
A Novel RNAi Lethality Rescue Screen to Identify Regulators of Adipogenesis.
Published in:
PLoS ONE, 2012, v. 7, n. 6, p. e37680, doi. 10.1371/journal.pone.0037680
By:
- van Beekum, Olivier;
- Yuan Gao;
- Berger, Ruud;
- Koppen, Arjen;
- Kalkhoven, Eric
Publication type:
Article
Liver-Specific Commd1 Knockout Mice Are Susceptible to Hepatic Copper Accumulation.
Published in:
PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0029183
By:
- Vonk, Willianne I. M.;
- Bartuzi, Paulina;
- Bie, Prim de;
- Kloosterhuis, Niels;
- Wichers, Catharina G. K.;
- Berger, Ruud;
- Haywood, Susan;
- Klomp, Leo W. J.;
- Wijmenga, Cisca;
- Sluis, Bart van de
Publication type:
Article
Simplivariate Models: Ideas and First Examples.
Published in:
PLoS ONE, 2008, v. 3, n. 9, p. 1, doi. 10.1371/journal.pone.0003259
By:
- Hageman, Jos A.;
- Hendriks, Margriet M. W. B.;
- Westerhuis, Johan A.;
- van der Werf, Mariët J.;
- Berger, Ruud;
- Smilde, Age K.
Publication type:
Article