Works by Berger, Dave K.

Results: 24

Dual RNA-Sequencing of Eucalyptus nitens during Phytophthora cinnamomi Challenge Reveals Pathogen and Host Factors Influencing Compatibility.

Published in:

Frontiers in Plant Science, 2016, p. 1, doi. 10.3389/fpls.2016.00191

By:

Meyer, Febé E.;
Shuey, Louise S.;
Naidoo, Sitha;
Mamni, Thandekile;
Berger, Dave K.;
Myburg, Alexander A.;
Van Den Berg, Noëlani;
Naidoo, Sanushka;
Gupta, Vijai Kumar;
Cervone, Felice;
Labate, Carlos Alberto

Publication type:

Article

The identification and differential expression of Eucalyptus grandis pathogenesis-related genes in response to salicylic acid and methyl jasmonate.

Published in:

Frontiers in Plant Science, 2013, v. 4, p. 1, doi. 10.3389/fpls.2013.00043

By:

Naidoo, Ronishree;
Ferreira, Linda;
Berger, Dave K.;
Myburg, Alexander A.;
Naidoo, Sanushka;
Jin-Long Qiu;
Abreu, Maria Elizabeth

Publication type:

Article

Systems genetics reveals a transcriptional network associated with susceptibility in the maize-grey leaf spot pathosystem.

Published in:

Plant Journal, 2017, v. 89, n. 4, p. 746, doi. 10.1111/tpj.13419

By:

Christie, Nanette;
Myburg, Alexander A.;
Joubert, Fourie;
Murray, Shane L.;
Carstens, Maryke;
Lin, Yao‐Cheng;
Meyer, Jacqueline;
Crampton, Bridget G.;
Christensen, Shawn A.;
Ntuli, Jean F.;
Wighard, Sara S.;
Van de Peer, Yves;
Berger, Dave K.

Publication type:

Article

RNA-Seq analysis of resistant and susceptible sub-tropical maize lines reveals a role for kauralexins in resistance to grey leaf spot disease, caused by Cercospora zeina.

Published in:

BMC Plant Biology, 2017, v. 17, p. 1, doi. 10.1186/s12870-017-1137-9

By:

Meyer, Jacqueline;
Berger, Dave K.;
Christensen, Shawn A.;
Murray, Shane L.

Publication type:

Article

Mapping QTL conferring resistance in maize to gray leaf spot disease caused by Cercospora zeina.

Published in:

BMC Genetics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2156-15-60

By:

Berger, Dave K.;
Carstens, Maryke;
Korsman, Jeanne N.;
Middleton, Felix;
Kloppers, Frederik J.;
Tongoona, Pangirayi;
Myburg, Alexander A.

Publication type:

Article

De novo Assembly of Transcriptomes From a B73 Maize Line Introgressed With a QTL for Resistance to Gray Leaf Spot Disease Reveals a Candidate Allele of a Lectin Receptor-Like Kinase.

Published in:

Frontiers in Plant Science, 2020, p. 1, doi. 10.3389/fpls.2020.00191

By:

Welgemoed, Tanya;
Pierneef, Rian;
Sterck, Lieven;
Van de Peer, Yves;
Swart, Velushka;
Scheepers, Kevin Daniel;
Berger, Dave K.

Publication type:

Article

IMA genome‑F17: Draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina

Published in:

IMA Fungus, 2022, v. 13, n. 1, p. 1, doi. 10.1186/s43008-022-00104-3

By:

Wingfield, Brenda D.;
Berger, Dave K.;
Coetzee, Martin P. A.;
Duong, Tuan A.;
Martin, Anke;
Pham, Nam Q.;
van den Berg, Noelani;
Wilken, P. Markus;
Arun-Chinnappa, Kiruba Shankari;
Barnes, Irene;
Buthelezi, Sikelela;
Dahanayaka, Buddhika Amarasinghe;
Durán, Alvaro;
Engelbrecht, Juanita;
Feurtey, Alice;
Fourie, Arista;
Fourie, Gerda;
Hartley, Jesse;
Kabwe, Eugene N. K.;
Maphosa, Mkhululi

Publication type:

Article

Draft genome of Cercospora zeina, Fusarium pininemorale, Hawksworthiomyces lignivorus, Huntiella decipiens and Ophiostoma ips.

Published in:

IMA Fungus, 2017, v. 8, n. 2, p. 385, doi. 10.5598/imafungus.2017.08.02.10

By:

Wingfield, Brenda D.;
Berger, Dave K.;
Steenkamp, Emma T.;
Hye-Jin Lim;
Duong, Tuan A.;
Bluhm, Burton H.;
De Beer, Z. Wilhelm;
De Vos, Lieschen;
Fourie, G.;
Naidoo, Kershney;
Olivier, Nicky;
Yao-Cheng Lin;
Van De Peer, Yves;
Joubert, Fourie;
Crampton, Bridget G.;
Swart, Velushka;
Soal, Nicole;
Tatham, Catherine;
Van Der Nest, Magriet A.;
Van Der Merwe, Nicolaas A.

Publication type:

Article

Exo-β-1,3-Glucanase from Yeast Inhibits Colletotrichum lupini and Botrytis cinerea Spore Germination.

Published in:

Journal of Phytopathology, 2009, v. 157, n. 1, p. 1, doi. 10.1111/j.1439-0434.2008.01434.x

By:

Oelofse, Dean;
Dubery, Ian;
Berger, Dave K.

Publication type:

Article

Population genomic analyses suggest recent dispersal events of the pathogen Cercospora zeina into East and Southern African maize cropping systems.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 11, p. 1, doi. 10.1093/g3journal/jkad214

By:

Welgemoed, Tanya;
Duong, Tuan A.;
Barnes, Irene;
Stukenbrock, Eva H.;
Berger, Dave K.

Publication type:

Article

Double‐stranded RNA uptake for the control of the maize pathogen Cercospora zeina.

Published in:

Plant Pathology, 2024, v. 73, n. 6, p. 1480, doi. 10.1111/ppa.13909

By:

Marais, Ingrid;
Buitendag, Carla;
Duong, Tuan A.;
Crampton, Bridget G.;
Theron, Jacques;
Kidanemariam, Dawit;
Berger, Dave K.

Publication type:

Article

Genome-wide mapping of histone H3 lysine 4 trimethylation in Eucalyptus grandis developing xylem

Published in:

BMC Plant Biology, 2015, v. 15, n. 1, p. 117, doi. 10.1186/s12870-015-0499-0

By:

Hussey, Steven G;
Mizrachi, Eshchar;
Groover, Andrew;
Berger, Dave K;
Myburg, Alexander A

Publication type:

Article

Next generation sequencing reveals past and current widespread occurrence of maize yellow mosaic virus in South Africa.

Published in:

European Journal of Plant Pathology, 2020, v. 158, n. 1, p. 237, doi. 10.1007/s10658-020-02070-1

By:

Welgemoed, Tanya;
Pierneef, Rian;
Read, David A.;
Schulze, Susanna E.;
Pietersen, Gerhard;
Berger, Dave K.

Publication type:

Article

Opportunities for unlocking the potential of genomics for African trees.

Published in:

New Phytologist, 2016, v. 210, n. 3, p. 772, doi. 10.1111/nph.13826

By:

Daru, Barnabas H.;
Berger, Dave K.;
Wyk, Abraham E.

Publication type:

Article

Investigating the molecular underpinnings underlying morphology and changes in carbon partitioning during tension wood formation in Eucalyptus.

Published in:

New Phytologist, 2015, v. 206, n. 4, p. 1351, doi. 10.1111/nph.13152

By:

Mizrachi, Eshchar;
Maloney, Victoria J.;
Silberbauer, Janine;
Hefer, Charles A.;
Berger, Dave K.;
Mansfield, Shawn D.;
Myburg, Alexander A.

Publication type:

Article

Deep Learning Diagnostics of Gray Leaf Spot in Maize under Mixed Disease Field Conditions.

Published in:

Plants (2223-7747), 2022, v. 11, n. 15, p. 1942, doi. 10.3390/plants11151942

By:

Craze, Hamish A.;
Pillay, Nelishia;
Joubert, Fourie;
Berger, Dave K.

Publication type:

Article

Combination of linkage and association mapping with genomic prediction to infer QTL regions associated with gray leaf spot and northern corn leaf blight resistance in tropical maize.

Published in:

Frontiers in Genetics, 2023, p. 1, doi. 10.3389/fgene.2023.1282673

By:

Omondi, Dennis O.;
Dida, Mathews M.;
Berger, Dave K.;
Beyene, Yoseph;
Nsibo, David L.;
Juma, Collins;
Mahabaleswara, Suresh L.;
Gowda, Manje

Publication type:

Article

SSHscreen and SSHdb, generic software for microarray based gene discovery: application to the stress response in cowpea.

Published in:

2010

By:

Coetzer, Nanette;
Gazendam, Inge;
Oelofse, Dean;
Berger, Dave K.

Publication type:

Abstract

Salicylic acid confers resistance to a biotrophic rust pathogen, Puccinia substriata, in pearl millet ( Pennisetum glaucum).

Published in:

Molecular Plant Pathology, 2009, v. 10, n. 2, p. 291, doi. 10.1111/j.1364-3703.2008.00532.x

By:

CRAMPTON, BRIDGET G.;
HEIN, INGO;
BERGER, DAVE K.

Publication type:

Article

Tolerance in banana to Fusarium wilt is associated with early up-regulation of cell wall-strengthening genes in the roots.

Published in:

Molecular Plant Pathology, 2007, v. 8, n. 3, p. 333, doi. 10.1111/j.1364-3703.2007.00389.x

By:

VAN DEN BERG, NOËLANI;
BERGER, DAVE K.;
HEIN, INGO;
BIRCH, PAUL R. J.;
WINGFIELD, MICHAEL J.;
VILJOEN, ALTUS

Publication type:

Article

Recent advances in the population biology and management of maize foliar fungal pathogens Exserohilum turcicum, Cercospora zeina and Bipolaris maydis in Africa.

Published in:

Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1404483

By:

Nsibo, David L.;
Barnes, Irene;
Berger, Dave K.

Publication type:

Article

Application of Chloroplast Phylogenomics to Resolve Species Relationships Within the Plant Genus <italic>Amaranthus</italic>.

Published in:

Journal of Molecular Evolution, 2018, v. 86, n. 3/4, p. 216, doi. 10.1007/s00239-018-9837-9

By:

Viljoen, Erika;
Odeny, Damaris A.;
Coetzee, Martin P. A.;
Berger, Dave K.;
Rees, David J. G.

Publication type:

Article

Making genome editing a success story in Africa.

Published in:

2024

By:

Abkallo, Hussein M.;
Arbuthnot, Patrick;
Auer, Thomas O.;
Berger, Dave K.;
Burger, Johan;
Chakauya, Ereck;
Concordet, Jean-Paul;
Diabate, Abdoulaye;
Di Donato, Vincenzo;
Groenewald, Jan-Hendrik;
Guindo, Amadou;
Koekemoer, Lizette L.;
Nazare, Florence;
Nolan, Tony;
Okumu, Fredros;
Orefuwa, Emma;
Paemka, Lily;
Prieto-Godino, Lucia;
Runo, Steven;
Sadler, Marie

Publication type:

Letter

MADIBA: A web server toolkit for biological interpretation of Plasmodium and plant gene clusters.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-105

By:

Law, Philip J.;
Claudel-Renard, Clotilde;
Joubert, Fourie;
Louw, Abraham I.;
Berger, Dave K.

Publication type:

Article