Works by Berben, Tom

Results: 17

Insights into the single cell draft genome of ' Candidatus Achromatium palustre'.

Published in:

Standards in Genomic Sciences, 2016, v. 11, n. 1, p. 1, doi. 10.1186/s40793-016-0146-x

By:

Salman, Verena;
Berben, Tom;
Bowers, Robert;
Woyke, Tanja;
Teske, Andreas;
Angert, Esther

Publication type:

Article

Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0097-7

By:

Berben, Tom;
Sorokin, Dimitry;
Ivanova, Natalia;
Pati, Amrita;
Kyrpides, Nikos;
Goodwin, Lynne;
Woyke, Tanja;
Muyzer, Gerard

Publication type:

Article

Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0078-x

By:

Berben, Tom;
Sorokin, Dimitry;
Ivanova, Natalia;
Pati, Amrita;
Kyrpides, Nikos;
Goodwin, Lynne;
Woyke, Tanja;
Muyzer, Gerard

Publication type:

Article

Partial genome sequence of Thioalkalivibrio thiocyanodenitrificans ARhD 1, a chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium capable of complete denitrification.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0080-3

By:

Berben, Tom;
Sorokin, Dimitry;
Ivanova, Natalia;
Pati, Amrita;
Kyrpides, Nikos;
Goodwin, Lynne;
Woyke, Tanja;
Muyzer, Gerard

Publication type:

Article

Microbial diversity and biogeochemical cycling in soda lakes.

Published in:

Extremophiles, 2014, v. 18, n. 5, p. 791, doi. 10.1007/s00792-014-0670-9

By:

Sorokin, Dimitry;
Berben, Tom;
Melton, Emily;
Overmars, Lex;
Vavourakis, Charlotte;
Muyzer, Gerard

Publication type:

Article

The Acidophilic Methanotroph Methylacidimicrobium tartarophylax 4AC Grows as Autotroph on H<sub>2</sub> Under Microoxic Conditions.

Published in:

Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.02352

By:

Mohammadi, Sepehr S.;
Schmitz, Rob A.;
Pol, Arjan;
Berben, Tom;
Jetten, Mike S. M.;
Op den Camp, Huub J. M.

Publication type:

Article

Gene-centered metagenome analysis of Vulcano Island soil (Aeolian archipelago, Italy) reveals diverse microbial key players in methane, hydrogen and sulfur cycles.

Published in:

Antonie van Leeuwenhoek, 2024, v. 117, n. 1, p. 1, doi. 10.1007/s10482-024-01995-5

By:

Angius, Federica;
Cremers, Geert;
Frank, Jeroen;
Witkowski, Caitlyn;
Pol, Arjan;
van Alen, Theo A.;
Jetten, Mike S. M.;
Op den Camp, Huub J. M.;
Berben, Tom

Publication type:

Article

Gene-centered metagenome analysis of Vulcano Island soil (Aeolian archipelago, Italy) reveals diverse microbial key players in methane, hydrogen and sulfur cycles.

Published in:

Antonie van Leeuwenhoek, 2024, v. 117, n. 1, p. 1, doi. 10.1007/s10482-024-01995-5

By:

Angius, Federica;
Cremers, Geert;
Frank, Jeroen;
Witkowski, Caitlyn;
Pol, Arjan;
van Alen, Theo A.;
Jetten, Mike S. M.;
Op den Camp, Huub J. M.;
Berben, Tom

Publication type:

Article

The Polar Fox Lagoon in Siberia harbours a community of Bathyarchaeota possessing the potential for peptide fermentation and acetogenesis.

Published in:

Antonie van Leeuwenhoek, 2022, v. 115, n. 10, p. 1229, doi. 10.1007/s10482-022-01767-z

By:

Berben, Tom;
Forlano Bó, Franco;
in 't Zandt, Michiel H.;
Yang, Sizhong;
Liebner, Susanne;
Welte, Cornelia U.

Publication type:

Article

Structure of the 4‐hydroxy‐tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV and the phylogeny of the aminotransferase pathway.

Published in:

Acta Crystallographica: Section F, Structural Biology Communications, 2020, v. 76, n. 5, p. 199, doi. 10.1107/S2053230X20005294

By:

Schmitz, Rob A.;
Dietl, Andreas;
Müller, Melanie;
Berben, Tom;
Op den Camp, Huub J. M.;
Barends, Thomas R. M.

Publication type:

Article

Comparative Genome Analysis of Three Thiocyanate Oxidizing Thioalkalivibrio Species Isolated from Soda Lakes.

Published in:

Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00254

By:

Berben, Tom;
Overmars, Lex;
Sorokin, Dimitry Y.;
Muyzer, Gerard

Publication type:

Article

Simultaneous sulfide and methane oxidation by an extremophile.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38699-9

By:

Schmitz, Rob A.;
Peeters, Stijn H.;
Mohammadi, Sepehr S.;
Berben, Tom;
van Erven, Timo;
Iosif, Carmen A.;
van Alen, Theo;
Versantvoort, Wouter;
Jetten, Mike S. M.;
Op den Camp, Huub J. M.;
Pol, Arjan

Publication type:

Article

Mechanisms of extracellular electron transfer in anaerobic methanotrophic archaea.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-45758-2

By:

Ouboter, Heleen T.;
Mesman, Rob;
Sleutels, Tom;
Postma, Jelle;
Wissink, Martijn;
Jetten, Mike S. M.;
Ter Heijne, Annemiek;
Berben, Tom;
Welte, Cornelia U.

Publication type:

Article

Calcite-accumulating large sulfur bacteria of the genus Achromatium in Sippewissett Salt Marsh.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 11, p. 2503, doi. 10.1038/ismej.2015.62

By:

Salman, Verena;
Yang, Tingting;
Berben, Tom;
Klein, Frieder;
Angert, Esther;
Teske, Andreas

Publication type:

Article

Diversity and Distribution of Sulfur Oxidation-Related Genes in Thioalkalivibrio , a Genus of Chemolithoautotrophic and Haloalkaliphilic Sulfur-Oxidizing Bacteria.

Published in:

Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.00160

By:

Berben, Tom;
Overmars, Lex;
Sorokin, Dimitry Y.;
Muyzer, Gerard

Publication type:

Article

Methane-Dependent Extracellular Electron Transfer at the Bioanode by the Anaerobic Archaeal Methanotroph " Candidatus Methanoperedens".

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.820989

By:

Ouboter, Heleen T.;
Berben, Tom;
Berger, Stefanie;
Jetten, Mike S. M.;
Sleutels, Tom;
Ter Heijne, Annemiek;
Welte, Cornelia U.

Publication type:

Article

Methanethiol Consumption and Hydrogen Sulfide Production by the Thermoacidophilic Methanotroph Methylacidiphilum fumariolicum SolV.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.857442

By:

Schmitz, Rob A.;
Mohammadi, Sepehr S.;
van Erven, Timo;
Berben, Tom;
Jetten, Mike S. M.;
Pol, Arjan;
Op den Camp, Huub J. M.

Publication type:

Article