Works by Bent, Stephen J.

Results: 27

Statistical methods for characterizing diversity of microbial communities by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes.

Published in:

Environmental Microbiology, 2006, v. 8, n. 5, p. 929, doi. 10.1111/j.1462-2920.2005.00959.x

By:

Abdo, Zaid;
Schüette, Ursel M. E.;
Bent, Stephen J.;
Williams, Christopher J.;
Forney, Larry J.;
Joyce, Paul

Publication type:

Article

Monitoring human babesiosis emergence through vector surveillance New England, USA.

Published in:

2014

By:

Diuk-Wasser, Maria A;
Liu, Yuchen;
Steeves, Tanner K;
Folsom-O'Keefe, Corrine;
Dardick, Kenneth R;
Lepore, Timothy;
Bent, Stephen J;
Usmani-Brown, Sahar;
Telford 3rd, Sam R;
Fish, Durland;
Krause, Peter J;
Telford, Sam R 3rd

Publication type:

journal article

Monitoring Human Babesiosis Emergence through Vector Surveillance, New England, USA.

Published in:

Emerging Infectious Diseases, 2014, v. 20, n. 2, p. 225, doi. 10.3201/eid1302/130644

By:

Diuk-Wasser, Maria A.;
Yuchen Liu;
Steeves, Tanner K.;
Folsom-O'Keefe, Corrine;
Dardick, Kenneth R.;
Lepore, Timothy;
Bent, Stephen J.;
Usmani-Brown, Sahar;
Telford III, Sam R.;
Fish, Durland;
Krause, Peter J.

Publication type:

Article

There is a specific response to pH by isolates of Haemophilus influenzae and this has a direct influence on biofilm formation.

Published in:

BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-47

By:

Ishak, Nadiah;
Tikhomirova, Alexandra;
Bent, Stephen J.;
Ehrlich, Garth D.;
Hu, Fen Z.;
Kidd, Stephen P.

Publication type:

Article

Integrative transcriptome meta-analysis reveals widespread sex-biased gene expression at the human fetal–maternal interface.

Published in:

Molecular Human Reproduction, 2014, v. 20, n. 8, p. 810, doi. 10.1093/molehr/gau035

By:

Buckberry, Sam;
Bianco-Miotto, Tina;
Bent, Stephen J.;
Dekker, Gustaaf A.;
Roberts, Claire T.

Publication type:

Article

One Health approach to identify research needs in bovine and human babesioses: workshop report.

Published in:

Parasites & Vectors, 2010, v. 3, n. 1, p. 36, doi. 10.1186/1756-3305-3-36

By:

León, Adalberto A. Pérez de;
Strickman, Daniel A.;
Knowles, Donald P.;
Fish, Durland;
Thacker, Eileen;
laFuente, José de;
Krause, Peter J.;
Wikel, Stephen K.;
Miller, Ryan S.;
Wagner, Gale G.;
Almazán, Consuelo;
Hillman, Robert;
Messenger, Matthew T.;
Ugstad, Paul O.;
Duhaime, Roberta A.;
Teel, Pete D.;
Ortega-Santos, Alfonso;
Hewitt, David G.;
Bowers, Edwin J.;
Bent, Stephen J

Publication type:

Article

Evolutionary Relationships and Range Evolution of Greenhood Orchids (Subtribe Pterostylidinae): Insights From Plastid Phylogenomics.

Published in:

Frontiers in Plant Science, 2022, p. 1, doi. 10.3389/fpls.2022.912089

By:

Nargar, Katharina;
O'Hara, Kate;
Mertin, Allison;
Bent, Stephen J.;
Nauheimer, Lars;
Simpson, Lalita;
Zimmer, Heidi;
Molloy, Brian P. J.;
Clements, Mark A.

Publication type:

Article

massiR: a method for predicting the sex of samples in gene expression microarray datasets.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2084, doi. 10.1093/bioinformatics/btu161

By:

Buckberry, Sam;
Bent, Stephen J.;
Bianco-Miotto, Tina;
Roberts, Claire T.

Publication type:

Article

Author Correction: Pathogenic copy number variants that affect gene expression contribute to genomic burden in cerebral palsy.

Published in:

2019

By:

Corbett, Mark A.;
van Eyk, Clare L.;
Webber, Dani L.;
Bent, Stephen J.;
Newman, Morgan;
Harper, Kelly;
Berry, Jesia G.;
Azmanov, Dimitar N.;
Woodward, Karen J.;
Gardner, Alison E.;
Slee, Jennie;
Pérez-Jurado, Luís A.;
MacLennan, Alastair H.;
Gecz, Jozef

Publication type:

Correction Notice

Author Correction: Pathogenic copy number variants that affect gene expression contribute to genomic burden in cerebral palsy.

Published in:

2019

By:

Corbett, Mark A.;
van Eyk, Clare L.;
Webber, Dani L.;
Bent, Stephen J.;
Newman, Morgan;
Harper, Kelly;
Berry, Jesia G.;
Azmanov, Dimitar N.;
Woodward, Karen J.;
Gardner, Alison E.;
Slee, Jennie;
Pérez-Jurado, Luís A.;
MacLennan, Alastair H.;
Gecz, Jozef

Publication type:

Correction Notice

Pathogenic copy number variants that affect gene expression contribute to genomic burden in cerebral palsy.

Published in:

NPJ Genomic Medicine, 2018, v. 3, n. 1, p. N.PAG, doi. 10.1038/s41525-018-0073-4

By:

Corbett, Mark A.;
van Eyk, Clare L.;
Webber, Dani L.;
Bent, Stephen J.;
Newman, Morgan;
Harper, Kelly;
Berry, Jesia G.;
Azmanov, Dimitar N.;
Woodward, Karen J.;
Gardner, Alison E.;
Slee, Jennie;
Pérez-Jurado, Luís A.;
MacLennan, Alastair H.;
Gecz, Jozef

Publication type:

Article

Closely-related Borrelia burgdorferi (sensu stricto) strains exhibit similar fitness in single infections and asymmetric competition in multiple infections.

Published in:

Parasites & Vectors, 2017, v. 10, p. 1, doi. 10.1186/s13071-016-1964-9

By:

Rynkiewicz, Evelyn C.;
Brown, Julia;
Tufts, Danielle M.;
Ching-I Huang;
Helge Kampen;
Bent, Stephen J.;
Durland Fish;
Diuk-Wasser, Maria A.

Publication type:

Article

Bacterial succession in a glacier foreland of the High Arctic.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 11, p. 1258, doi. 10.1038/ismej.2009.71

By:

Schütte, Ursel M E;
Abdo, Zaid;
Bent, Stephen J.;
Williams, Christopher J.;
Schneider, G. Maria;
Solheim, Bjørn;
Forney, Larry J.

Publication type:

Article

The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2008, v. 2, n. 7, p. 689, doi. 10.1038/ismej.2008.44

By:

Bent, Stephen J.;
Forney, Larry J.

Publication type:

Article

Parathyroid hormone-related peptide and Indian hedgehog expression patterns in naturally acquired equine osteochondrosis

Published in:

Journal of Orthopaedic Research, 2002, v. 20, n. 6, p. 1290, doi. 10.1016/S0736-0266(02)00055-4

By:

Semevolos, Stacy A.;
Brower-Toland, Brent D.;
Bent, Stephen J.;
Nixon, Alan J.

Publication type:

Article

Gene mediated insulin-like growth factor-I delivery to the synovium.

Published in:

Journal of Orthopaedic Research, 2001, v. 19, n. 5, p. 759, doi. 10.1016/S0736-0266(00)00077-2

By:

Saxer, Rachel A.;
Bent, Stephen J.;
Brower-Toland, Brent D.;
Mi, Zhibao;
Robbins, Paul D.;
Evans, Christopher H.;
Nixon, Alan J.

Publication type:

Article

Chondrocytic differentiation of mesenchymal stem cells sequentially exposed to transforming growth factor-β1 in monolayer and insulin-like growth factor-I in a three-dimensional matrix.

Published in:

Journal of Orthopaedic Research, 2001, v. 19, n. 4, p. 738, doi. 10.1016/S0736-0266(00)00054-1

By:

Worster, Allison A.;
Brower-Toland, Brent D.;
Fortier, Lisa A.;
Bent, Stephen J.;
Williams, Janice;
Nixon, Alan J.

Publication type:

Article

Whole genome capture of vector-borne pathogens from mixed DNA samples: a case study of Borrelia burgdorferi.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1634-x

By:

Carpi, Giovanna;
Walter, Katharine S.;
Bent, Stephen J.;
Gatewood Hoen, Anne;
Diuk-Wasser, Maria;
Caccone, Adalgisa

Publication type:

Article

Using Gap Visualization to Navigate Multivariate Metabarcode Data, Select Primer Pairs, and Enhance Reference Data Quality.

Published in:

Environmental DNA, 2024, v. 6, n. 6, p. 1, doi. 10.1002/edn3.597

By:

Chua, Xin‐Yi;
Ord, Louise;
Bent, Stephen J.;
Lovell, David;
McGrath, Annette

Publication type:

Article

A recurrent de novo mutation in TMEM106B causes hypomyelinating leukodystrophy.

Published in:

2017

By:

Simons, Cas;
Dyment, David;
Bent, Stephen J.;
Crawford, Joanna;
D'Hooghe, Marc;
Kohlschütter, Alfried;
Venkateswaran, Sunita;
Helman, Guy;
Poll-The, Bwee-Tien;
Makowski, Christine C.;
Yoko Ito;
Kernohan, Kristin;
Hartley, Taila;
Waisfisz, Quinten;
Taft, Ryan J.;
van der Knaap, Marjo S.;
Wolf, Nicole I.;
Ito, Yoko;
Care4Rare Consortium

Publication type:

journal article

A genetic screen reveals a periplasmic copper chaperone required for nitrite reductase activity in pathogenic Neisseria.

Published in:

FASEB Journal, 2015, v. 29, n. 9, p. 3828, doi. 10.1096/fj.15-270751

By:

Jen, Freda E.-C.;
Djoko, Karrera Y.;
Bent, Stephen J.;
Day, Christopher J.;
McEwan, Alastair G.;
Jennings, Michael P.

Publication type:

Article

Assessing DNA for fish identifications from reference collections: the good, bad and ugly shed light on formalin fixation and sequencing approaches.

Published in:

Journal of Fish Biology, 2021, v. 98, n. 5, p. 1421, doi. 10.1111/jfb.14687

By:

Appleyard, Sharon A.;
Maher, Safia;
Pogonoski, John J.;
Bent, Stephen J.;
Chua, Xin‐Yi;
McGrath, Annette

Publication type:

Article

Genome sequencing in persistently unsolved white matter disorders.

Published in:

Annals of Clinical & Translational Neurology, 2020, v. 7, n. 1, p. 144, doi. 10.1002/acn3.50957

By:

Helman, Guy;
Lajoie, Bryan R.;
Crawford, Joanna;
Takanohashi, Asako;
Walkiewicz, Marzena;
Dolzhenko, Egor;
Gross, Andrew M.;
Gainullin, Vladimir G.;
Bent, Stephen J.;
Jenkinson, Emma M.;
Ferdinandusse, Sacha;
Waterham, Hans R.;
Dorboz, Imen;
Bertini, Enrico;
Miyake, Noriko;
Wolf, Nicole I.;
Abbink, Truus E. M.;
Kirwin, Susan M.;
Tan, Christina M.;
Hobson, Grace M.

Publication type:

Article

Plastid phylogenomics reveals evolutionary relationships in the mycoheterotrophic orchid genus Dipodium and provides insights into plastid gene degeneration.

Published in:

Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1388537

By:

Goedderz, Stephanie;
Clements, Mark A.;
Bent, Stephen J.;
Nicholls, James A.;
Patel, Vidushi S.;
Crayn, Darren M.;
Schlüter, Philipp M.;
Nargar, Katharina

Publication type:

Article

Inducible and Reversible Lentiviral and Recombination Mediated Cassette Exchange (RMCE) Systems for Controlling Gene Expression.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0116373

By:

Bersten, David C.;
Sullivan, Adrienne E.;
Li, Dian;
Bhakti, Veronica;
Bent, Stephen J.;
Whitelaw, Murray L.

Publication type:

Article

Placental transcriptome co-expression analysis reveals conserved regulatory programs across gestation.

Published in:

BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-016-3384-9

By:

Buckberry, Sam;
Bianco-Miotto, Tina;
Bent, Stephen J.;
Clifton, Vicki;
Shoubridge, Cheryl;
Shankar, Kartik;
Roberts, Claire T.

Publication type:

Article

MiCA: A Web-Based Tool for the Analysis of Microbial Communities Based on Terminal-Restriction Fragment Length Polymorphisms of 16S and 18S rRNA Genes.

Published in:

Microbial Ecology, 2007, v. 53, n. 4, p. 562, doi. 10.1007/s00248-006-9106-0

By:

Shyu, Conrad;
Soule, Terry;
Bent, Stephen J.;
Foster, James A.;
Forney, Larry J.

Publication type:

Article