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Extra-osseous Ewing sarcoma of the pancreas: case report with radiologic, pathologic, and molecular correlation, and brief review of the literature.
Published in:
2018
By:
- Komforti, Miglena K.;
- Thomas, Rebecca M.;
- Sokolovskaya, Evgeniya;
- D'Agostino, Catherine A.;
- Benayed, Ryma
Publication type:
journal article
Genetic and epigenetic landscape of IDH-wildtype glioblastomas with FGFR3-TACC3 fusions.
Published in:
Acta Neuropathologica Communications, 2020, v. 8, n. 1, p. N.PAG, doi. 10.1186/s40478-020-01058-6
By:
- Mata, Douglas A.;
- Benhamida, Jamal K.;
- Lin, Andrew L.;
- Vanderbilt, Chad M.;
- Yang, Soo-Ryum;
- Villafania, Liliana B.;
- Ferguson, Donna C.;
- Jonsson, Philip;
- Miller, Alexandra M.;
- Tabar, Viviane;
- Brennan, Cameron W.;
- Moss, Nelson S.;
- Sill, Martin;
- Benayed, Ryma;
- Mellinghoff, Ingo K.;
- Rosenblum, Marc K.;
- Arcila, Maria E.;
- Ladanyi, Marc;
- Bale, Tejus A.
Publication type:
Article
The value of cell‐free DNA for molecular pathology.
Published in:
Journal of Pathology, 2018, v. 244, n. 5, p. 616, doi. 10.1002/path.5048
By:
- Stewart, Caitlin M.;
- Kothari, Prachi D.;
- Mouliere, Florent;
- Mair, Richard;
- Somnay, Saira;
- Benayed, Ryma;
- Zehir, Ahmet;
- Weigelt, Britta;
- Dawson, Sarah‐Jane;
- Arcila, Maria E.;
- Berger, Michael F.;
- Tsui, Dana W. Y.
Publication type:
Article
EWSR1::YY1 fusion positive peritoneal epithelioid mesothelioma harbors mesothelioma epigenetic signature: Report of 3 cases in support of an emerging entity.
Published in:
Genes, Chromosomes & Cancer, 2022, v. 61, n. 10, p. 592, doi. 10.1002/gcc.23074
By:
- Dermawan, Josephine K.;
- Torrence, Dianne;
- Lee, Cheng‐Han;
- Villafania, Liliana;
- Mullaney, Kerry A.;
- DiNapoli, Sara;
- Sukhadia, Purvil;
- Benayed, Ryma;
- Borsu, Laetitia;
- Agaram, Narasimhan P.;
- Nash, Garrett M.;
- Dickson, Brendan C.;
- Benhamida, Jamal;
- Antonescu, Cristina R.
Publication type:
Article
Complete Pathological Response to Crizotinib in a Patient with ALK-rearranged Lung Adenocarcinoma.
Published in:
2020
By:
- Mattar, Marissa S.;
- Chang, Jason;
- Benayed, Ryma;
- Halpenny, Darragh;
- Powers, Astin;
- Kleiner, David E.;
- Drilon, Alexander;
- Kris, Mark G.
Publication type:
journal article
Comprehensive detection of germline variants by MSK-IMPACT, a clinical diagnostic platform for solid tumor molecular oncology and concurrent cancer predisposition testing.
Published in:
BMC Medical Genomics, 2017, v. 10, p. 1, doi. 10.1186/s12920-017-0271-4
By:
- Cheng, Donavan T.;
- Prasad, Meera;
- Chekaluk, Yvonne;
- Benayed, Ryma;
- Sadowska, Justyna;
- Zehir, Ahmet;
- Syed, Aijazuddin;
- Wang, Yan Elsa;
- Somar, Joshua;
- Yirong Li;
- Yelskaya, Zarina;
- Wong, Donna;
- Robson, Mark E.;
- Offit, Kenneth;
- Berger, Michael F.;
- Nafa, Khedoudja;
- Ladanyi, Marc;
- Liying Zhang
Publication type:
Article
Oncogenic TRK fusions are amenable to inhibition in hematologic malignancies.
Published in:
2018
By:
- Taylor, Justin;
- Pavlick, Dean;
- Akihide Yoshimi;
- Marcelus, Christina;
- Chung, Stephen S.;
- Hechtman, Jaclyn F.;
- Benayed, Ryma;
- Cocco, Emiliano;
- Durham, Benjamin H.;
- Bitner, Lillian;
- Inoue, Daichi;
- Chung, Young Rock;
- Mullaney, Kerry;
- Watts, Justin M.;
- Diamond, Eli L.;
- Albacker, Lee A.;
- Mughal, Tariq I.;
- Ebata, Kevin;
- Tuch, Brian B.;
- Ku, Nora
Publication type:
journal article
Novel activating BRAF fusion identifies a recurrent alternative mechanism for ERK activation in pediatric Langerhans cell histiocytosis.
Published in:
2018
By:
- Zarnegar, Sara;
- Durham, Benjamin H.;
- Khattar, Pallavi;
- Shukla, Neerav N.;
- Benayed, Ryma;
- Lacouture, Mario E.;
- Lavi, Ehud;
- Lyden, David C.;
- Diamond, Eli L.;
- Dunkel, Ira J.;
- Abdel‐Wahab, Omar;
- Abdel-Wahab, Omar
Publication type:
journal article
Polymorphous low-grade neuroepithelial tumor of the young (PLNTY): an epileptogenic neoplasm with oligodendroglioma-like components, aberrant CD34 expression, and genetic alterations involving the MAP kinase pathway.
Published in:
Acta Neuropathologica, 2017, v. 133, n. 3, p. 417, doi. 10.1007/s00401-016-1639-9
By:
- Huse, Jason;
- Snuderl, Matija;
- Jones, David;
- Brathwaite, Carole;
- Altman, Nolan;
- Lavi, Ehud;
- Saffery, Richard;
- Sexton-Oates, Alexandra;
- Blumcke, Ingmar;
- Capper, David;
- Karajannis, Matthias;
- Benayed, Ryma;
- Chavez, Lukas;
- Thomas, Cheddhi;
- Serrano, Jonathan;
- Borsu, Laetitia;
- Ladanyi, Marc;
- Rosenblum, Marc
Publication type:
Article
Next generation sequencing of breast implant‐associated anaplastic large cell lymphomas reveals a novel STAT3‐JAK2 fusion among other activating genetic alterations within the JAK‐STAT pathway.
Published in:
Breast Journal, 2021, v. 27, n. 4, p. 314, doi. 10.1111/tbj.14205
By:
- Quesada, Andrés E.;
- Zhang, Yanming;
- Ptashkin, Ryan;
- Ho, Caleb;
- Horwitz, Steven;
- Benayed, Ryma;
- Dogan, Ahmet;
- Arcila, Maria E.
Publication type:
Article
Mutant-RB1 circulating tumor DNA in the blood of unilateral retinoblastoma patients: What happens during enucleation surgery: A pilot study.
Published in:
PLoS ONE, 2023, v. 17, n. 2, p. 1, doi. 10.1371/journal.pone.0271505
By:
- Abramson, David H.;
- Mandelker, Diana L.;
- Brannon, A. Rose;
- Dunkel, Ira J.;
- Benayed, Ryma;
- Berger, Michael F.;
- Arcila, Maria E.;
- Ladanyi, Marc;
- Friedman, Danielle Novetsky;
- Jayakumaran, Gowtham;
- Diosdado, Monica S.;
- Robbins, Melissa A.;
- Haggag-Lindgren, Dianna;
- Shukla, Neerav;
- Walsh, Michael F.;
- Kothari, Prachi;
- Tsui, Dana W. Y.;
- Francis, Jasmine H.
Publication type:
Article
Acute myeloid leukemia with an MN1-ETV6 fusion in a young child with Down syndrome.
Published in:
Cold Spring Harbor Molecular Case Studies, 2022, v. 8, n. 3, p. 1, doi. 10.1101/mcs.a006167
By:
- Rosenzweig, Jaclyn;
- Pillai, Pallavi M.;
- Prockop, Susan;
- Benayed, Ryma;
- Brodersen, Lisa Eidenschink;
- Najfeld, Vesna;
- Loken, Michael R.;
- Yanming Zhang;
- Shukla, Neerav
Publication type:
Article
Next-generation sequencing of cerebrospinal fluid for clinical molecular diagnostics in pediatric, adolescent and young adult brain tumor patients.
Published in:
Neuro-Oncology, 2022, v. 24, p. 1763, doi. 10.1093/neuonc/noac035
By:
- Miller, Alexandra M;
- Szalontay, Luca;
- Bouvier, Nancy;
- Hill, Katherine;
- Ahmad, Hamza;
- Rafailov, Johnathan;
- Lee, Alex J;
- Rodriguez-Sanchez, M Irene;
- Yildirim, Onur;
- Patel, Arti;
- Bale, Tejus A;
- Benhamida, Jamal K;
- Benayed, Ryma;
- Arcila, Maria E;
- Donzelli, Maria;
- Dunkel, Ira J;
- Gilheeney, Stephen W;
- Khakoo, Yasmin;
- Kramer, Kim;
- Sait, Sameer F
Publication type:
Article
Molecular profiling and analysis of genetic aberrations aimed at identifying potential therapeutic targets in fibrolamellar carcinoma of the liver.
Published in:
2020
By:
- El Dika, Imane;
- Bowman, Anita S.;
- Berger, Michael F.;
- Capanu, Marinela;
- Chou, Joanne F.;
- Benayed, Ryma;
- Zehir, Ahmet;
- Shia, Jinru;
- O'Reilly, Eileen M.;
- Klimstra, David S.;
- Solit, David B.;
- Abou‐Alfa, Ghassan K.;
- Abou-Alfa, Ghassan K
Publication type:
journal article
Optimizing Workflows and Processing of Cytologic Samples for Comprehensive Analysis by Next-Generation Sequencing.
Published in:
Archives of Pathology & Laboratory Medicine, 2016, v. 140, n. 11, p. 1200, doi. 10.5858/arpa.2016-0108-RA
By:
- Shaozhou Ken Tian;
- Killian, J. Keith;
- Rekhtman, Natasha;
- Benayed, Ryma;
- Middha, Sumit;
- Ladanyi, Marc;
- Lin, Oscar;
- Arcila, Maria E.
Publication type:
Article
Early-Onset Pancreas Cancer: Clinical Descriptors, Genomics, and Outcomes.
Published in:
2021
By:
- Varghese, Anna M;
- Singh, Isha;
- Singh, Rituraj;
- Kunte, Siddharth;
- Chou, Joanne F;
- Capanu, Marinela;
- Wong, Winston;
- Lowery, Maeve A;
- Stadler, Zsofia K;
- Salo-Mullen, Erin;
- Saadat, Lily V;
- Wei, Alice C;
- Reyngold, Marsha;
- Basturk, Olca;
- Benayed, Ryma;
- Mandelker, Diana;
- Iacobuzio-Donahue, Christine A;
- Kelsen, David P;
- Park, Wungki;
- Yu, Kenneth H
Publication type:
journal article
Structure–function analysis of oncogenic EGFR Kinase Domain Duplication reveals insights into activation and a potential approach for therapeutic targeting.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21613-6
By:
- Du, Zhenfang;
- Brown, Benjamin P.;
- Kim, Soyeon;
- Ferguson, Donna;
- Pavlick, Dean C.;
- Jayakumaran, Gowtham;
- Benayed, Ryma;
- Gallant, Jean-Nicolas;
- Zhang, Yun-Kai;
- Yan, Yingjun;
- Red-Brewer, Monica;
- Ali, Siraj M.;
- Schrock, Alexa B.;
- Zehir, Ahmet;
- Ladanyi, Marc;
- Smith, Adam W.;
- Meiler, Jens;
- Lovly, Christine M.
Publication type:
Article
Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-020-20565-7
By:
- Gao, Teng;
- Ptashkin, Ryan;
- Bolton, Kelly L.;
- Sirenko, Maria;
- Fong, Christopher;
- Spitzer, Barbara;
- Menghrajani, Kamal;
- Ossa, Juan E. Arango;
- Zhou, Yangyu;
- Bernard, Elsa;
- Levine, Max;
- Martinez, Juan S. Medina;
- Zhang, Yanming;
- Franch-Expósito, Sebastià;
- Patel, Minal;
- Braunstein, Lior Z.;
- Kelly, Daniel;
- Yabe, Mariko;
- Benayed, Ryma;
- Caltabellotta, Nicole M.
Publication type:
Article

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