Works by Beltrame, Luca

Results: 29

A computational procedure to identify significant overlap of differentially expressed and genomic imbalanced regions in cancer datasets†.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 15, p. 5057, doi. 10.1093/nar/gkp520

By:

Bicciato, Silvio;
Spinelli, Roberta;
Zampieri, Mattia;
Mangano, Eleonora;
Ferrari, Francesco;
Beltrame, Luca;
Cifola, Ingrid;
Peano, Clelia;
Solari, Aldo;
Battaglia, Cristina

Publication type:

Article

Targeted Mutational Analysis of Circulating Tumor DNA to Decipher Temporal Heterogeneity of High-Grade Serous Ovarian Cancer.

Published in:

Cancers, 2022, v. 14, n. 15, p. 3697, doi. 10.3390/cancers14153697

By:

Paracchini, Lara;
Mannarino, Laura;
Beltrame, Luca;
Landoni, Fabio;
Fruscio, Robert;
Grassi, Tommaso;
Dalessandro, Maria Luisa;
D'Incalci, Maurizio;
Marchini, Sergio

Publication type:

Article

Musclin, A Myokine Induced by Aerobic Exercise, Retards Muscle Atrophy During Cancer Cachexia in Mice.

Published in:

Cancers, 2019, v. 11, n. 10, p. 1541, doi. 10.3390/cancers11101541

By:

Re Cecconi, Andrea D.;
Forti, Mara;
Chiappa, Michela;
Zhu, Zhiyong;
Zingman, Leonid V.;
Cervo, Luigi;
Beltrame, Luca;
Marchini, Sergio;
Piccirillo, Rosanna

Publication type:

Article

Lurbinectedin reduces tumour-associated macrophages and the inflammatory tumour microenvironment in preclinical models.

Published in:

2017

By:

Belgiovine, Cristina;
Bello, Ezia;
Liguori, Manuela;
Craparotta, Ilaria;
Mannarino, Laura;
Paracchini, Lara;
Beltrame, Luca;
Marchini, Sergio;
Galmarini, Carlos M;
Mantovani, Alberto;
Frapolli, Roberta;
Allavena, Paola;
D'Incalci, Maurizio

Publication type:

journal article

Bone marrow fibroblasts overexpress miR‐27b and miR‐214 in step with multiple myeloma progression, dependent on tumour cell‐derived exosomes.

Published in:

Journal of Pathology, 2019, v. 247, n. 2, p. 241, doi. 10.1002/path.5187

By:

Frassanito, Maria Antonia;
Desantis, Vanessa;
Di Marzo, Lucia;
Craparotta, Ilaria;
Beltrame, Luca;
Marchini, Sergio;
Annese, Tiziana;
Visino, Fabrizio;
Arciuli, Marcella;
Saltarella, Ilaria;
Lamanuzzi, Aurelia;
Solimando, Antonio G;
Nico, Beatrice;
De Angelis, Maria;
Racanelli, Vito;
Mariggiò, Maria A;
Chiacchio, Rosistella;
Pizzuti, Michele;
Gallone, Anna;
Fumarulo, Ruggiero

Publication type:

Article

MAL gene overexpression as a marker of high-grade serous ovarian carcinoma stem-like cells that predicts chemoresistance and poor prognosis.

Published in:

2017

By:

Zanotti, Laura;
Romani, Chiara;
Tassone, Laura;
Todeschini, Paola;
Tassi, Renata Alessandra;
Bandiera, Elisabetta;
Damia, Giovanna;
Ricci, Francesca;
Ardighieri, Laura;
Calza, Stefano;
Marchini, Sergio;
Beltrame, Luca;
Tognon, Germana;
D'Incalci, Maurizio;
Pecorelli, Sergio;
Sartori, Enrico;
Odicino, Franco;
Ravaggi, Antonella;
Bignotti, Eliana

Publication type:

journal article

Genome-wide screening of copy number alterations and LOH events in renal cell carcinomas and integration with gene expression profile.

Published in:

Molecular Cancer, 2008, v. 7, p. 1, doi. 10.1186/1476-4598-7-6

By:

Cifola, Ingrid;
Spinelli, Roberta;
Beltrame, Luca;
Peano, Clelia;
Fasoli, Ester;
Ferrero, Stefano;
Bosari, Silvano;
Signorini, Stefano;
Rocco, Francesco;
Perego, Roberto;
Proserpio, Vanessa;
Raimondo, Francesca;
Mocarelli, Paolo;
Battaglia, Cristina

Publication type:

Article

Detection of TP53 Clonal Variants in Papanicolaou Test Samples Collected up to 6 Years Prior to High-Grade Serous Epithelial Ovarian Cancer Diagnosis.

Published in:

JAMA Network Open, 2020, v. 3, n. 7, p. e207566, doi. 10.1001/jamanetworkopen.2020.7566

By:

Paracchini, Lara;
Pesenti, Chiara;
Delle Marchette, Martina;
Beltrame, Luca;
Bianchi, Tommaso;
Grassi, Tommaso;
Buda, Alessandro;
Landoni, Fabio;
Ceppi, Lorenzo;
Bosetti, Cristina;
Paderno, Mariachiara;
Adorni, Marco;
Vicini, Debora;
Perego, Patrizia;
Leone, Biagio Eugenio;
D'Incalci, Maurizio;
Marchini, Sergio;
Fruscio, Robert

Publication type:

Article

TP53 mutations and survival in ovarian carcinoma patients receiving first‐line chemotherapy plus bevacizumab: Results of the MITO16A/MaNGO OV‐2 study.

Published in:

International Journal of Cancer, 2025, v. 156, n. 5, p. 1085, doi. 10.1002/ijc.35203

By:

Bignotti, Eliana;
Simeon, Vittorio;
Ardighieri, Laura;
Kuhn, Elisabetta;
Marchini, Sergio;
Califano, Daniela;
Cecere, Sabrina Chiara;
Bugatti, Mattia;
Spina, Anna;
Scognamiglio, Giosuè;
Paracchini, Lara;
Russo, Daniela;
Arenare, Laura;
Tognon, Germana;
Lorusso, Domenica;
Beltrame, Luca;
D'Incalci, Maurizio;
Sartori, Enrico;
De Censi, Andrea;
Odicino, Franco

Publication type:

Article

A comprehensive investigation of histotype‐specific microRNA and their variants in Stage I epithelial ovarian cancers.

Published in:

International Journal of Cancer, 2023, v. 152, n. 9, p. 1989, doi. 10.1002/ijc.34408

By:

Velle, Angelo;
Pesenti, Chiara;
Grassi, Tommaso;
Beltrame, Luca;
Martini, Paolo;
Jaconi, Marta;
Agostinis, Federico;
Calura, Enrica;
Katsaros, Dionyssios;
Borella, Fulvio;
Fruscio, Robert;
D'Incalci, Maurizio;
Marchini, Sergio;
Romualdi, Chiara

Publication type:

Article

Expression profiles of PRKG1, SDF2L1 and PPP1R12A are predictive and prognostic factors for therapy response and survival in high‐grade serous ovarian cancer.

Published in:

International Journal of Cancer, 2020, v. 147, n. 2, p. 565, doi. 10.1002/ijc.32935

By:

Benvenuto, Giuseppe;
Todeschini, Paola;
Paracchini, Lara;
Calura, Enrica;
Fruscio, Robert;
Romani, Chiara;
Beltrame, Luca;
Martini, Paolo;
Ravaggi, Antonella;
Ceppi, Lorenzo;
Sales, Gabriele;
Donati, Federica;
Perego, Patrizia;
Zanotti, Laura;
Ballabio, Sara;
Grassi, Tommaso;
Delle Marchette, Martina;
Tognon, Germana;
Sartori, Enrico;
Adorni, Marco

Publication type:

Article

Genomic instability analysis in DNA from Papanicolaou test provides proof-of-principle early diagnosis of high-grade serous ovarian cancer.

Published in:

Science Translational Medicine, 2023, v. 15, n. 725, p. 1, doi. 10.1126/scitranslmed.adi2556

By:

Paracchini, Lara;
Mannarino, Laura;
Romualdi, Chiara;
Zadro, Riccardo;
Beltrame, Luca;
Fuso Nerini, Ilaria;
Zola, Paolo;
Laudani, Maria E.;
Pagano, Eva;
Giordano, Livia;
Fruscio, Robert;
Landoni, Fabio;
Franceschi, Silvia;
Dalessandro, Maria L.;
Canzonieri, Vincenzo;
Bocciolone, Luca;
Lorusso, Domenica;
Bosetti, Cristina;
Raspagliesi, Francesco;
Garassino, Isabella M. G.

Publication type:

Article

FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients.

Published in:

Journal of Experimental & Clinical Cancer Research (17569966), 2017, v. 36, p. 1, doi. 10.1186/s13046-017-0536-y

By:

Tassi, Renata A.;
Todeschini, Paola;
Siegel, Eric R.;
Calza, Stefano;
Cappella, Paolo;
Ardighieri, Laura;
Cadei, Moris;
Bugatti, Mattia;
Romani, Chiara;
Bandiera, Elisabetta;
Zanotti, Laura;
Tassone, Laura;
Guarino, Donatella;
Santonocito, Concetta;
Capoluongo, Ettore D.;
Beltrame, Luca;
Erba, Eugenio;
Marchini, Sergio;
D'Incalci, Maurizio;
Donzelli, Carla

Publication type:

Article

Pathway Processor 2.0: a web resource for pathway-based analysis of high-throughput data.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1825, doi. 10.1093/bioinformatics/btt292

By:

Beltrame, Luca;
Bianco, Luca;
Fontana, Paolo;
Cavalieri, Duccio

Publication type:

Article

The Biological Connection Markup Language: a SBGN-compliant format for visualization, filtering and analysis of biological pathways.

Published in:

Bioinformatics, 2011, v. 27, n. 15, p. 2127, doi. 10.1093/bioinformatics/btr339

By:

Beltrame, Luca;
Calura, Enrica;
Popovici, Razvan R.;
Rizzetto, Lisa;
Guedez, Damariz Rivero;
Donato, Michele;
Romualdi, Chiara;
Draghici, Sorin;
Cavalieri, Duccio

Publication type:

Article

Electroporated Antigen-Encoding mRNA Is Not a Danger Signal to Human Mature Monocyte-Derived Dendritic Cells.

Published in:

2015

By:

Hoyer, Stefanie;
Gerer, Kerstin F.;
Pfeiffer, Isabell A.;
Prommersberger, Sabrina;
Höfflin, Sandra;
Jaitly, Tanushree;
Beltrame, Luca;
Cavalieri, Duccio;
Schuler, Gerold;
Vera, Julio;
Schaft, Niels;
Dörrie, Jan;
Höfflin, Sandra;
Dörrie, Jan

Publication type:

journal article

Wiring miRNAs to pathways: a topological approach to integrate miRNA and mRNA expression profiles.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. e96, doi. 10.1093/nar/gku354

By:

Calura, Enrica;
Martini, Paolo;
Sales, Gabriele;
Beltrame, Luca;
Chiorino, Giovanna;
D’Incalci, Maurizio;
Marchini, Sergio;
Romualdi, Chiara

Publication type:

Article

Photosynthesis, Yield and Quality in Wild Rocket (Diplotaxis tenuifolia L.) under Photoluminescent Greenhouse Covers.

Published in:

Agronomy, 2023, v. 13, n. 9, p. 2372, doi. 10.3390/agronomy13092372

By:

Paradiso, Roberta;
Di Mola, Ida;
Conti, Stefano;
Ottaiano, Lucia;
Cozzolino, Eugenio;
Rippa, Massimo;
Mormile, Pasquale;
Melchionna, Giuseppe;
Testa, Antonino;
Beltrame, Luca;
Mori, Mauro

Publication type:

Article

The Modular Nature of Dendritic Cell Responses to Commensal and Pathogenic Fungi.

Published in:

PLoS ONE, 2012, v. 7, n. 8, p. 1, doi. 10.1371/journal.pone.0042430

By:

Rizzetto, Lisa;
Buschow, Sonja I.;
Beltrame, Luca;
Figdor, Carl G.;
Schierer, Stephan;
Schuler, Gerold;
Cavalieri, Duccio;
Fritz, Jörg Hermann

Publication type:

Article

A Systems Biology Approach to Characterize the Regulatory Networks Leading to Trabectedin Resistance in an In Vitro Model of Myxoid Liposarcoma.

Published in:

PLoS ONE, 2012, v. 7, n. 4, p. 1, doi. 10.1371/journal.pone.0035423

By:

Uboldi, Sarah;
Calura, Enrica;
Beltrame, Luca;
Nerini, Ilaria Fuso;
Marchini, Sergio;
Cavalieri, Duccio;
Erba, Eugenio;
Chiorino, Giovanna;
Ostano, Paola;
D'Angelo, Daniela;
D'Incalci, Maurizio;
Romualdi, Chiara

Publication type:

Article

Using Pathway Signatures as Means of Identifying Similarities among Microarray Experiments.

Published in:

PLoS ONE, 2009, v. 4, n. 1, p. 1, doi. 10.1371/journal.pone.0004128

By:

Beltrame, Luca;
Rizzetto, Lisa;
Paola, Raffaele;
Rocca-Serra, Philippe;
Gambineri, Luca;
Battaglia, Cristina;
Cavalieri, Duccio

Publication type:

Article

Electroporated Antigen-Encoding mRNA Is Not a Danger Signal to Human Mature Monocyte-Derived Dendritic Cells.

Published in:

Journal of Immunology Research, 2015, v. 2015, p. 1, doi. 10.1155/2015/952184

By:

Hoyer, Stefanie;
Gerer, Kerstin F.;
Pfeiffer, Isabell A.;
Prommersberger, Sabrina;
Höfflin, Sandra;
Jaitly, Tanushree;
Beltrame, Luca;
Cavalieri, Duccio;
Schuler, Gerold;
Vera, Julio;
Schaft, Niels;
Dörrie, Jan

Publication type:

Article

Transcriptional Characterization of Stage I Epithelial Ovarian Cancer: A Multicentric Study.

Published in:

Cells (2073-4409), 2019, v. 8, n. 12, p. 1554, doi. 10.3390/cells8121554

By:

Calura, Enrica;
Ciciani, Matteo;
Sambugaro, Andrea;
Paracchini, Lara;
Benvenuto, Giuseppe;
Milite, Salvatore;
Martini, Paolo;
Beltrame, Luca;
Zane, Flaminia;
Fruscio, Robert;
Delle Marchette, Martina;
Borella, Fulvio;
Tognon, Germana;
Ravaggi, Antonella;
Katsaros, Dionyssios;
Bignotti, Eliana;
Odicino, Franco;
D'Incalci, Maurizio;
Marchini, Sergio;
Romualdi, Chiara

Publication type:

Article

Integrated approach to generate artificial samples with low tumor fraction for somatic variant calling benchmarking.

Published in:

BMC Bioinformatics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12859-024-05793-8

By:

Sergi, Aldo;
Beltrame, Luca;
Marchini, Sergio;
Masseroli, Marco

Publication type:

Article

SAMURAI: shallow analysis of copy number alterations using a reproducible and integrated bioinformatics pipeline.

Published in:

Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbaf035

By:

Potente, Sara;
Boscarino, Diego;
Paladin, Dino;
Marchini, Sergio;
Beltrame, Luca;
Romualdi, Chiara

Publication type:

Article

Analysis of differential miRNA expression in primary tumor and stroma of colorectal cancer patients.

Published in:

2014

By:

Della Vittoria Scarpati, Giuseppina;
Calura, Enrica;
Di Marino, Mariacristina;
Romualdi, Chiara;
Beltrame, Luca;
Malapelle, Umberto;
Troncone, Giancarlo;
De Stefano, Alfonso;
Pepe, Stefano;
De Placido, Sabino;
D'Incalci, Maurizio;
Marchini, Sergio;
Carlomagno, Chiara

Publication type:

journal article

IL-4-induced gene 1 maintains high Tob1 expression that contributes to TCR unresponsiveness in human T helper 17 cells.

Published in:

European Journal of Immunology, 2014, v. 44, n. 3, p. 654, doi. 10.1002/eji.201344047

By:

Santarlasci, Veronica;
Maggi, Laura;
Mazzoni, Alessio;
Capone, Manuela;
Querci, Valentina;
Rossi, Maria Caterina;
Beltrame, Luca;
Cavalieri, Duccio;
De Palma, Raffaele;
Liotta, Francesco;
Cosmi, Lorenzo;
Maggi, Enrico;
Romagnani, Sergio;
Annunziato, Francesco

Publication type:

Article

Constraints for monocyte-derived dendritic cell functions under inflammatory conditions.

Published in:

European Journal of Immunology, 2012, v. 42, n. 2, p. 458, doi. 10.1002/eji.201141924

By:

Fekete, Tünde;
Szabo, Attila;
Beltrame, Luca;
Vivar, Nancy;
Pivarcsi, Andor;
Lanyi, Arpad;
Cavalieri, Duccio;
Rajnavölgyi, Eva;
Rethi, Bence

Publication type:

Article

Exome sequencing in an Italian family with Alzheimer's disease points to a role for seizure-related gene 6 (SEZ6) rare variant R615H.

Published in:

Alzheimer's Research & Therapy, 2018, v. 10, n. 1, p. N.PAG, doi. 10.1186/s13195-018-0435-2

By:

Paracchini, Lara;
Beltrame, Luca;
Boeri, Lucia;
Fusco, Federica;
Caffarra, Paolo;
Marchini, Sergio;
Albani, Diego;
Forloni, Gianluigi

Publication type:

Article