Works by Becker, Emmanuelle

Results: 22

Exposure of human fetal kidneys to mild analgesics interferes with early nephrogenesis.

Published in:

FASEB Journal, 2021, v. 35, n. 7, p. 1, doi. 10.1096/fj.202100050R

By:

Leverrier-Penna, Sabrina;
Michel, Alain;
Lecante, Laetitia L.;
Costet, Nathalie;
Suglia, Antonio;
Desdoits-Lethimonier, Christèle;
Boulay, Hugoline;
Viel, Roselyne;
Chemouny, Jonathan M.;
Becker, Emmanuelle;
Lavoué, Vincent;
Rolland, Antoine D.;
Dejucq-Rainsford, Nathalie;
Vigneau, Cécile;
Mazaud-Guittot, Séverine

Publication type:

Article

Small networks of expressed genes in the whole blood and relationships to profiles in circulating metabolites provide insights in inter-individual variability of feed efficiency in growing pigs.

Published in:

BMC Genomics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12864-023-09751-1

By:

Juigné, Camille;
Becker, Emmanuelle;
Gondret, Florence

Publication type:

Article

Fixing molecular complexes in BioPAX standards to enrich interactions and detect redundancies using semantic web technologies.

Published in:

Bioinformatics, 2023, v. 39, n. 5, p. 1, doi. 10.1093/bioinformatics/btad257

By:

Juigné, Camille;
Dameron, Olivier;
Moreews, François;
Gondret, Florence;
Becker, Emmanuelle

Publication type:

Article

Towards a reproducible interactome: semantic-based detection of redundancies to unify protein–protein interaction databases.

Published in:

Bioinformatics, 2022, v. 38, n. 6, p. 1685, doi. 10.1093/bioinformatics/btac013

By:

Melkonian, Marc;
Juigné, Camille;
Dameron, Olivier;
Rabut, Gwenaël;
Becker, Emmanuelle

Publication type:

Article

PAX2GRAPHML: a python library for large-scale regulation network analysis using BioPAX.

Published in:

Bioinformatics, 2021, v. 37, n. 24, p. 4889, doi. 10.1093/bioinformatics/btab441

By:

Moreews, François;
Simon, Hugo;
Siegel, Anne;
Gondret, Florence;
Becker, Emmanuelle

Publication type:

Article

The anti-cancer drug 5-fluorouracil affects cell cycle regulators and potential regulatory long non-coding RNAs in yeast.

Published in:

RNA Biology, 2019, v. 16, n. 6, p. 727, doi. 10.1080/15476286.2019.1581596

By:

Xie, Bingning;
Becker, Emmanuelle;
Stuparevic, Igor;
Wery, Maxime;
Szachnowski, Ugo;
Morillon, Antonin;
Primig, Michael

Publication type:

Article

Ndt80 activates the meiotic ORC1 transcript isoform and SMA2 via a bi-directional middle sporulation element in Saccharomyces cerevisiae.

Published in:

RNA Biology, 2016, v. 13, n. 9, p. 772, doi. 10.1080/15476286.2016.1191738

By:

Xie, Bingning;
Horecka, Joe;
Chu, Angela;
Davis, Ronald W.;
Becker, Emmanuelle;
Primig, Michael

Publication type:

Article

The histone deacetylase Rpd3/Sin3/Ume6 complex represses an acetate-inducible isoform of VTH2 in fermenting budding yeast cells.

Published in:

FEBS Letters, 2015, v. 589, n. 8, p. 924, doi. 10.1016/j.febslet.2015.02.022

By:

Stuparevic, Igor;
Becker, Emmanuelle;
Law, Michael J.;
Primig, Michael

Publication type:

Article

HMM-Kalign: a tool for generating sub-optimal HMM alignments.

Published in:

Bioinformatics, 2007, v. 23, n. 22, p. 3095, doi. 10.1093/bioinformatics/btm492

By:

Emmanuelle Becker;
AurÃ©lie Cotillard;
Vincent Meyer;
Hocine Madaoui;
RaphaÃ«l GuÃ©rois

Publication type:

Article

Detection of a tandem BRCT in Nbs1 and Xrs2 with functional implications in the DNA damage response.

Published in:

Bioinformatics, 2006, v. 22, n. 11, p. 1289, doi. 10.1093/bioinformatics/btl075

By:

Emmanuelle Becker;
Vincent Meyer

Publication type:

Article

Multifunctional proteins revealed by overlapping clustering in protein interaction network.

Published in:

Bioinformatics, 2012, v. 28, n. 1, p. 84, doi. 10.1093/bioinformatics/btr621

By:

Becker, Emmanuelle;
Robisson, Benoît;
Chapple, Charles E.;
Guénoche, Alain;
Brun, Christine

Publication type:

Article

Transglutaminase-3 Enzyme: A Putative Actor in Human Hair Shaft Scaffolding?

Published in:

Journal of Investigative Dermatology, 2009, v. 129, n. 2, p. 449, doi. 10.1038/jid.2008.231

By:

Thibaut, Sébastien;
Cavusoglu, Nükhet;
de Becker, Emmanuelle;
Zerbib, Franck;
Bednarczyk, Audrey;
Schaeffer, Christine;
van Dorsselaer, Alain;
Bernard, Bruno A.

Publication type:

Article

The epigenetic processes of meiosis in male mice are broadly affected by the widely used herbicide atrazine.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2095-y

By:

Gely-Pernot, Aurore;
Chunxiang Hao;
Becker, Emmanuelle;
Stuparevic, Igor;
Kervarrec, Christine;
Chalmel, Frédéric;
Primig, Michael;
Jégou, Bernard;
Smagulova, Fatima

Publication type:

Article

Global alterations of the transcriptional landscape during yeast growth and development in the absence of Ume6-dependent chromatin modification.

Published in:

Molecular Genetics & Genomics, 2015, v. 290, n. 5, p. 2031, doi. 10.1007/s00438-015-1051-5

By:

Lardenois, Aurélie;
Becker, Emmanuelle;
Walther, Thomas;
Law, Michael;
Xie, Bingning;
Demougin, Philippe;
Strich, Randy;
Primig, Michael

Publication type:

Article

The conserved histone deacetylase Rpd3 and the DNA binding regulator Ume6 repress BOI1's meiotic transcript isoform during vegetative growth in Saccharomyces cerevisiae.

Published in:

2016

By:

Yuchen Liu;
Stuparevic, Igor;
Bingning Xie;
Becker, Emmanuelle;
Law, Michael J.;
Primig, Michael

Publication type:

Correction Notice

The conserved histone deacetylase Rpd3 and the DNA binding regulator Ume6 repress BOI 1's meiotic transcript isoform during vegetative growth in S accharomyces cerevisiae.

Published in:

Molecular Microbiology, 2015, v. 96, n. 4, p. 861, doi. 10.1111/mmi.12976

By:

Liu, Yuchen;
Stuparevic, Igor;
Xie, Bingning;
Becker, Emmanuelle;
Law, Michael J.;
Primig, Michael

Publication type:

Article

Extreme multifunctional proteins identified from a human protein interaction network.

Published in:

Nature Communications, 2015, v. 6, n. 6, p. 7412, doi. 10.1038/ncomms8412

By:

Chapple, Charles E.;
Robisson, Benoit;
Spinelli, Lionel;
Guien, Céline;
Becker, Emmanuelle;
Brun, Christine

Publication type:

Article

Exposure to the widely used herbicide atrazine results in deregulation of global tissue-specific RNA transcription in the third generation and is associated with a global decrease of histone trimethylation in mice.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 20, p. 9784, doi. 10.1093/nar/gkw840

By:

Chunxiang Hao;
Gely-Pernot, Aurore;
Kervarrec, Christine;
Boudjema, Melissa;
Becker, Emmanuelle;
Khil, Pavel;
Tevosian, Sergei;
Jégou, Bernard;
Smagulova, Fatima

Publication type:

Article

The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community.

Published in:

Nucleic Acids Research, 2015, v. 43, n. W1, p. W109, doi. 10.1093/nar/gkv345

By:

Darde, Thomas A.;
Sallou, Olivier;
Becker, Emmanuelle;
Evrard, Bertrand;
Monjeaud, Cyril;
Le Bras, Yvan;
Jégou, Bernard;
Collin, Olivier;
Rolland, Antoine D.;
Chalmel, Frédéric

Publication type:

Article

The conserved histone deacetylase Rpd3 and its DNA binding subunit Ume6 control dynamic transcript architecture during mitotic growth and meiotic development.

Published in:

Nucleic Acids Research, 2015, v. 43, n. 1, p. 115, doi. 10.1093/nar/gku1185

By:

Lardenois, Aurélie;
Stuparevic, Igor;
Yuchen Liu;
Law, Michael J.;
Becker, Emmanuelle;
Smagulova, Fatima;
Waern, Karl;
Guilleux, Marie-Hélène;
Horecka, Joe;
Angela Chu;
Kervarrec, Christine;
Strich, Randy;
Snyder, Mike;
Davis, Ronald W.;
Steinmetz, Lars M.;
Primig, Michael

Publication type:

Article

MicroRNA signatures in genetic frontotemporal dementia and amyotrophic lateral sclerosis.

Published in:

Annals of Clinical & Translational Neurology, 2022, v. 9, n. 11, p. 1778, doi. 10.1002/acn3.51674

By:

Kmetzsch, Virgilio;
Latouche, Morwena;
Saracino, Dario;
Rinaldi, Daisy;
Camuzat, Agnès;
Gareau, Thomas;
Le Ber, Isabelle;
Colliot, Olivier;
Becker, Emmanuelle

Publication type:

Article

Functional Integrative Levels in the Human Interactome Recapitulate Organ Organization.

Published in:

PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0022051

By:

Souiai, Ouissem;
Becker, Emmanuelle;
Prieto, Carlos;
Benkahla, Alia;
Rivas, Javier De Las;
Brun, Christine

Publication type:

Article