Works by Bayer, Philipp E.


Results: 81
    1

    The unexplored diversity of rough-seeded lupins provides rich genomic resources and insights into lupin evolution.

    Published in:
    Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-58531-w
    By:
    • Susek, Karolina;
    • Vincenzi, Leonardo;
    • Tomaszewska, Magdalena;
    • Kroc, Magdalena;
    • Franco, Edoardo;
    • Cosentino, Emanuela;
    • Limongi, Antonina Rita;
    • Tanwar, Umesh Kumar;
    • Jamil, Humaira;
    • Nelson, Matthew Nicholas;
    • Bayer, Philipp E.;
    • Edwards, David;
    • Papa, Roberto;
    • Delledonne, Massimo;
    • Jackson, Scott A.
    Publication type:
    Article
    2

    Delayed leaf greening involves a major shift in the expression of cytosolic and mitochondrial ribosomes to plastid ribosomes in the highly phosphorus-use-efficient Hakea prostrata (Proteaceae).

    Published in:
    Plant & Soil, 2024, v. 496, n. 1/2, p. 7, doi. 10.1007/s11104-023-06275-1
    By:
    • Bird, Toby;
    • Nestor, Benjamin J.;
    • Bayer, Philipp E.;
    • Wang, Guannan;
    • Ilyasova, Albina;
    • Gille, Clément E.;
    • Soraru, Bryce E. H.;
    • Ranathunge, Kosala;
    • Severn-Ellis, Anita A.;
    • Jost, Ricarda;
    • Scheible, Wolf-Rüdiger;
    • Dassanayake, Maheshi;
    • Batley, Jacqueline;
    • Edwards, David;
    • Lambers, Hans;
    • Finnegan, Patrick M.
    Publication type:
    Article
    3
    4

    Pangenomics and Crop Genome Adaptation in a Changing Climate.

    Published in:
    Plants (2223-7747), 2022, v. 11, n. 15, p. 1949, doi. 10.3390/plants11151949
    By:
    • Petereit, Jakob;
    • Bayer, Philipp E.;
    • Thomas, William J. W.;
    • Tay Fernandez, Cassandria G.;
    • Amas, Junrey;
    • Zhang, Yueqi;
    • Batley, Jacqueline;
    • Edwards, David
    Publication type:
    Article
    5

    Evaluating Plant Gene Models Using Machine Learning.

    Published in:
    Plants (2223-7747), 2022, v. 11, n. 12, p. 1619, doi. 10.3390/plants11121619
    By:
    • Upadhyaya, Shriprabha R.;
    • Bayer, Philipp E.;
    • Tay Fernandez, Cassandria G.;
    • Petereit, Jakob;
    • Batley, Jacqueline;
    • Bennamoun, Mohammed;
    • Boussaid, Farid;
    • Edwards, David
    Publication type:
    Article
    6

    Genetic and Genomic Resources for Soybean Breeding Research.

    Published in:
    Plants (2223-7747), 2022, v. 11, n. 9, p. 1181, doi. 10.3390/plants11091181
    By:
    • Petereit, Jakob;
    • Marsh, Jacob I.;
    • Bayer, Philipp E.;
    • Danilevicz, Monica F.;
    • Thomas, William J. W.;
    • Batley, Jacqueline;
    • Edwards, David
    Publication type:
    Article
    7
    8
    9
    10
    11
    12
    13
    14
    15
    16
    17
    18
    19
    20
    21
    22
    23

    An efficient approach to BAC based assembly of complex genomes.

    Published in:
    Plant Methods, 2016, v. 12, p. 1, doi. 10.1186/s13007-016-0107-9
    By:
    • Visendi, Paul;
    • Berkman, Paul J.;
    • Hayashi, Satomi;
    • Golicz, Agnieszka A.;
    • Bayer, Philipp E.;
    • Ruperao, Pradeep;
    • Hurgobin, Bhavna;
    • Montenegro, Juan;
    • Chan, Chon-Kit Kenneth;
    • Staňková, Helena;
    • Batley, Jacqueline;
    • Šimková, Hana;
    • Doležel, Jaroslav;
    • Edwards, David
    Publication type:
    Article
    24
    25
    26
    27
    28
    29

    A comprehensive draft genome sequence for lupin ( Lupinus angustifolius), an emerging health food: insights into plant-microbe interactions and legume evolution.

    Published in:
    Plant Biotechnology Journal, 2017, v. 15, n. 3, p. 318, doi. 10.1111/pbi.12615
    By:
    • Hane, James K.;
    • Ming, Yao;
    • Kamphuis, Lars G.;
    • Nelson, Matthew N.;
    • Garg, Gagan;
    • Atkins, Craig A.;
    • Bayer, Philipp E.;
    • Bravo, Armando;
    • Bringans, Scott;
    • Cannon, Steven;
    • Edwards, David;
    • Foley, Rhonda;
    • Gao, Ling‐ling;
    • Harrison, Maria J.;
    • Huang, Wei;
    • Hurgobin, Bhavna;
    • Li, Sean;
    • Liu, Cheng‐Wu;
    • McGrath, Annette;
    • Morahan, Grant
    Publication type:
    Article
    30

    Climate Clever Clovers: New Paradigm to Reduce the Environmental Footprint of Ruminants by Breeding Low Methanogenic Forages Utilizing Haplotype Variation.

    Published in:
    Frontiers in Plant Science, 2017, p. 1, doi. 10.3389/fpls.2017.01463
    By:
    • Kaur, Parwinder;
    • Appels, Rudi;
    • Bayer, Philipp E.;
    • Keeble-Gagnere, Gabriel;
    • Jiankang Wang;
    • Hideki Hirakawa;
    • Kenta Shirasawa;
    • Vercoe, Philip;
    • Stefanova, Katia;
    • Durmic, Zoey;
    • Nichols, Phillip;
    • Revell, Clinton;
    • Isobe, Sachiko N.;
    • Edwards, David;
    • Erskine, William
    Publication type:
    Article
    31

    Isolation and Sequencing of Chromosome Arm 7RS of Rye, Secale cereale.

    Published in:
    International Journal of Molecular Sciences, 2022, v. 23, n. 19, p. 11106, doi. 10.3390/ijms231911106
    By:
    • Petereit, Jakob;
    • Tay Fernandez, Cassandria;
    • Marsh, Jacob I.;
    • Bayer, Philipp E.;
    • Thomas, William J. W.;
    • Aliyeva, Aybeniz Javad;
    • Karafiátová, Miroslava;
    • Doležel, Jaroslav;
    • Batley, Jacqueline;
    • Edwards, David
    Publication type:
    Article
    32

    Expanding Gene-Editing Potential in Crop Improvement with Pangenomes.

    Published in:
    International Journal of Molecular Sciences, 2022, v. 23, n. 4, p. 2276, doi. 10.3390/ijms23042276
    By:
    • Tay Fernandez, Cassandria G.;
    • Nestor, Benjamin J.;
    • Danilevicz, Monica F.;
    • Marsh, Jacob I.;
    • Petereit, Jakob;
    • Bayer, Philipp E.;
    • Batley, Jacqueline;
    • Edwards, David
    Publication type:
    Article
    33
    34
    35

    Chromosome-level genome assembly of the spangled emperor, Lethrinus nebulosus (Forsskål 1775).

    Published in:
    Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-04690-w
    By:
    • Parata, Lara;
    • Anstiss, Liam;
    • de Jong, Emma;
    • Doran, Adrianne;
    • Edwards, Richard J.;
    • Newman, Stephen J.;
    • Payet, Samuel D.;
    • Skepper, Craig L.;
    • Wakefield, Corey B.;
    • Depiazzi, Anna;
    • Faseeh, Ibrahim;
    • Huet, Lauren;
    • Huynh, Sang;
    • Missen, Laura;
    • Peirce, Tyler;
    • Ayad, Marcelle E.;
    • Bayer, Philipp E.;
    • Bennett, Adam J.;
    • Burnell, Stephen J.;
    • Cooper, Madalyn K.
    Publication type:
    Article
    36
    37

    Modelling of gene loss propensity in the pangenomes of three Brassica species suggests different mechanisms between polyploids and diploids.

    Published in:
    Plant Biotechnology Journal, 2021, v. 19, n. 12, p. 2488, doi. 10.1111/pbi.13674
    By:
    • Bayer, Philipp E.;
    • Scheben, Armin;
    • Golicz, Agnieszka A.;
    • Yuan, Yuxuan;
    • Faure, Sebastien;
    • Lee, HueyTyng;
    • Chawla, Harmeet Singh;
    • Anderson, Robyn;
    • Bancroft, Ian;
    • Raman, Harsh;
    • Lim, Yong Pyo;
    • Robbens, Steven;
    • Jiang, Lixi;
    • Liu, Shengyi;
    • Barker, Michael S.;
    • Schranz, M. Eric;
    • Wang, Xiaowu;
    • King, Graham J.;
    • Pires, J. Chris;
    • Chalhoub, Boulos
    Publication type:
    Article
    38
    39
    40
    41

    Trait associations in the pangenome of pigeon pea (Cajanus cajan).

    Published in:
    Plant Biotechnology Journal, 2020, v. 18, n. 9, p. 1946, doi. 10.1111/pbi.13354
    By:
    • Zhao, Junliang;
    • Bayer, Philipp E.;
    • Ruperao, Pradeep;
    • Saxena, Rachit K.;
    • Khan, Aamir W.;
    • Golicz, Agnieszka A.;
    • Nguyen, Henry T.;
    • Batley, Jacqueline;
    • Edwards, David;
    • Varshney, Rajeev K.
    Publication type:
    Article
    42
    43
    44

    Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus.

    Published in:
    Plant Biotechnology Journal, 2018, v. 16, n. 7, p. 1265, doi. 10.1111/pbi.12867
    By:
    • Hurgobin, Bhavna;
    • Golicz, Agnieszka A.;
    • Bayer, Philipp E.;
    • Chan, Chon‐Kit Kenneth;
    • Tirnaz, Soodeh;
    • Dolatabadian, Aria;
    • Schiessl, Sarah V.;
    • Samans, Birgit;
    • Montenegro, Juan D.;
    • Parkin, Isobel A. P.;
    • Pires, J. Chris;
    • Chalhoub, Boulos;
    • King, Graham J.;
    • Snowdon, Rod;
    • Batley, Jacqueline;
    • Edwards, David
    Publication type:
    Article
    45

    Assembly and comparison of two closely related Brassica napus genomes.

    Published in:
    Plant Biotechnology Journal, 2017, v. 15, n. 12, p. 1602, doi. 10.1111/pbi.12742
    By:
    • Bayer, Philipp E.;
    • Hurgobin, Bhavna;
    • Golicz, Agnieszka A.;
    • Chan, Chon‐Kit Kenneth;
    • Yuan, Yuxuan;
    • Lee, HueyTyng;
    • Renton, Michael;
    • Meng, Jinling;
    • Li, Ruiyuan;
    • Long, Yan;
    • Zou, Jun;
    • Bancroft, Ian;
    • Chalhoub, Boulos;
    • King, Graham J.;
    • Batley, Jacqueline;
    • Edwards, David
    Publication type:
    Article
    46
    47

    The pangenome of an agronomically important crop plant Brassica oleracea.

    Published in:
    Nature Communications, 2016, v. 7, n. 11, p. 13390, doi. 10.1038/ncomms13390
    By:
    • Golicz, Agnieszka A.;
    • Bayer, Philipp E.;
    • Barker, Guy C.;
    • Edger, Patrick P.;
    • Kim, HyeRan;
    • Martinez, Paula A.;
    • Chan, Chon Kit Kenneth;
    • Severn-Ellis, Anita;
    • McCombie, W. Richard;
    • Parkin, Isobel A. P.;
    • Paterson, Andrew H.;
    • Pires, J. Chris;
    • Sharpe, Andrew G.;
    • Tang, Haibao;
    • Teakle, Graham R.;
    • Town, Christopher D.;
    • Batley, Jacqueline;
    • Edwards, David
    Publication type:
    Article
    48
    49
    50