Works by Bastarache, Lisa

Results: 75

Aggregating Electronic Health Record Data for COVID-19 Research—Caveat Emptor.

Published in:

2021

By:

Brown, Jeffrey S.;
Bastarache, Lisa;
Weiner, Mark G.

Publication type:

Opinion

Reply to Ward and Colleagues' Comment on "Using Human Experiments of Nature to Predict Drug Safety Issues: An Example with PCSK9 Inhibitors".

Published in:

2018

By:

Jerome, Rebecca N.;
Pulley, Jill M.;
Roden, Dan M.;
Shirey-Rice, Jana K.;
Bastarache, Lisa A.;
Bernard, Gordon;
Ekstrom, Leeland;
Lancaster, William J.;
Denny, Joshua C.

Publication type:

Letter

Using Human 'Experiments of Nature' to Predict Drug Safety Issues: An Example with PCSK9 Inhibitors.

Published in:

2018

By:

Jerome, Rebecca N.;
Pulley, Jill M.;
Roden, Dan M.;
Shirey-Rice, Jana K.;
Bastarache, Lisa A.;
R. Bernard, Gordon;
B. Ekstrom, Leeland;
Lancaster, William J.;
Denny, Joshua C.

Publication type:

journal article

Undiagnosed Disease Network collaborative approach in diagnosing rare disease in a patient with a mosaic CACNA1D variant.

Published in:

American Journal of Medical Genetics. Part A, 2024, v. 194, n. 7, p. 1, doi. 10.1002/ajmg.a.63597

By:

Ezell, Kimberly M.;
Tinker, Rory J.;
Furuta, Yutaka;
Gulsevin, Alican;
Bastarache, Lisa;
Hamid, Rizwan;
Cogan, Joy D.;
Rives, Lynette;
Neumann, Serena;
Corner, Brian;
Kozuria, Mary;
Phillips, John A.;
Adams, David R.;
Afzali, Ben;
Al‐Beshri, Ali;
Allworth, Aimee;
Alvarez, Raquel L.;
Alvey, Justin;
Andrews, Ashley;
Ashley, Euan A.

Publication type:

Article

Data from electronic healthcare records expand our understanding of X‐linked genetic diseases.

Published in:

American Journal of Medical Genetics. Part A, 2024, v. 194, n. 5, p. 1, doi. 10.1002/ajmg.a.63527

By:

Tinker, Rory J.;
Bastarache, Lisa;
Ezell, Kimberly;
Neumann, Serena M.;
Furuta, Yutaka;
Morgan, Karee A.;
Phillips, John A.

Publication type:

Article

The contribution of mosaicism to genetic diseases and de novo pathogenic variants.

Published in:

American Journal of Medical Genetics. Part A, 2023, v. 191, n. 10, p. 2482, doi. 10.1002/ajmg.a.63309

By:

Tinker, Rory J.;
Bastarache, Lisa;
Ezell, Kimberly;
Kobren, Shilpa Nadimpalli;
Esteves, Cecilia;
Rosenfeld, Jill A.;
Macnamara, Ellen F.;
Hamid, Rizwan;
Cogan, Joy D.;
Rinker, David;
Mukharjee, Souhrid;
Glass, Ian;
Dipple, Katrina;
Phillips, John A.

Publication type:

Article

Co-detection of SARS-CoV-2 with Secondary Respiratory Pathogen Infections.

Published in:

2021

By:

Freeman, Clifford L.;
Miller, Nathaniel M.;
Bastarache, Lisa;
Peterson, Josh;
Self, Wesley H.;
Barrett, Tyler W.;
Ward, Michael J.

Publication type:

Letter

The Gain-of-Function Integrin β Pro33 Variant Alters the Serotonin System in the Mouse Brain.

Published in:

Journal of Neuroscience, 2017, v. 37, n. 46, p. 11271, doi. 10.1523/JNEUROSCI.1482-17.2017

By:

Dohn, Michael R.;
Kooker, Christopher G.;
Bastarache, Lisa;
Jessen, Tammy;
Rinaldi, Capria;
Varney, Seth;
Mazalouskas, Matthew D.;
Pan, Hope;
Oliver, Kendra H.;
Edwards, Digna R. Velez;
Sutcliffe, James S.;
Denny, Joshua C.;
Carneiro, Ana M. D.

Publication type:

Article

New Insights into Clinical and Mechanistic Heterogeneity of the Acute Respiratory Distress Syndrome Summary of the Aspen Lung Conference 2021.

Published in:

American Journal of Respiratory Cell & Molecular Biology, 2022, v. 67, n. 3, p. 284, doi. 10.1165/rcmb.2022-0089WS

By:

Martin, Thomas R.;
Zemans, Rachel L.;
Ware, Lorraine B.;
Schmidt, Eric P.;
Riches, David W. H.;
Bastarache, Lisa;
Calfee, Carolyn S.;
Desai, Tushar J.;
Herold, Susanne;
Hough, Catherine L.;
Looney, Mark R.;
Matthay, Michael A.;
Meyer, Nuala;
Parikh, Samir M.;
Stevens, Troy;
Thompson, B. Taylor

Publication type:

Article

Limited clinical utility for GWAS or polygenic risk score for postoperative acute kidney injury in non-cardiac surgery in European-ancestry patients.

Published in:

2022

By:

Larach, Daniel B.;
Lewis, Adam;
Bastarache, Lisa;
Pandit, Anita;
He, Jing;
Sinha, Anik;
Douville, Nicholas J.;
Heung, Michael;
Mathis, Michael R.;
Mosley, Jonathan D.;
Wanderer, Jonathan P.;
Kheterpal, Sachin;
Zawistowski, Matthew;
Brummett, Chad M.;
Siew, Edward D.;
Robinson-Cohen, Cassianne;
Kertai, Miklos D.

Publication type:

journal article

phers R package: using phenotype risk scores based on electronic health records to study Mendelian disease and rare genetic variants.

Published in:

Bioinformatics, 2022, v. 38, n. 21, p. 4972, doi. 10.1093/bioinformatics/btac619

By:

Aref, Layla;
Bastarache, Lisa;
Hughey, Jacob J

Publication type:

Article

Cox regression is robust to inaccurate EHR-extracted event time: an application to EHR-based GWAS.

Published in:

Bioinformatics, 2022, v. 38, n. 8, p. 2297, doi. 10.1093/bioinformatics/btac086

By:

Irlmeier, Rebecca;
Hughey, Jacob J;
Bastarache, Lisa;
Denny, Joshua C;
Chen, Qingxia

Publication type:

Article

Human Immunodeficiency Virus Status, Tenofovir Exposure, and the Risk of Poor Coronavirus Disease 19 Outcomes: Real-World Analysis From 6 United States Cohorts Before Vaccine Rollout.

Published in:

Clinical Infectious Diseases, 2023, v. 76, n. 10, p. 1727, doi. 10.1093/cid/ciad084

By:

Lea, Alexandra N;
Leyden, Wendy A;
Sofrygin, Oleg;
Marafino, Ben J;
Skarbinski, Jacek;
Napravnik, Sonia;
Agil, Deana;
Augenbraun, Michael;
Benning, Lorie;
Horberg, Michael A;
Jefferson, Celeena;
Marconi, Vincent C;
Park, Lesley S;
Gordon, Kirsha S;
Bastarache, Lisa;
Gangireddy, Srushti;
Althoff, Keri N;
Coburn, Sally B;
Gebo, Kelly A;
Lang, Raynell

Publication type:

Article

A Phenome-Wide Association Study Identifies a Novel Asthma Risk Locus Near TERC.

Published in:

2016

By:

Claar, Dru D.;
Larkin, Emma K.;
Bastarache, Lisa;
Blackwell, Timothy S.;
Loyd, James E.;
Hartert, Tina V.;
Denny, Joshua C.;
Kropski, Jonathan A.

Publication type:

Letter

Cox regression increases power to detect genotype-phenotype associations in genomic studies using the electronic health record.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6192-1

By:

Hughey, Jacob J.;
Rhoades, Seth D.;
Fu, Darwin Y.;
Bastarache, Lisa;
Denny, Joshua C.;
Chen, Qingxia

Publication type:

Article

Prostaglandin I2 signaling licenses Treg suppressive function and prevents pathogenic reprogramming.

Published in:

2021

By:

Norlander, Allison E.;
Bloodworth, Melissa H.;
Shinji Toki;
Jian Zhang;
Weisong Zhou;
Boyd, Kelli L.;
Polosukhin, Vasiliy V.;
Cephus, Jacqueline-Yvonne;
Ceneviva, Zachary J.;
Gandhi, Vivek D.;
Chowdhury, Nowrin U.;
Charbonnier, Louis-Marie;
Rogers, Lisa M.;
Wang, Janey;
Aronoff, David M.;
Bastarache, Lisa;
Newcomb, Dawn C.;
Chatila, Talal A.;
Peebles Jr., R. Stokes;
Toki, Shinji

Publication type:

journal article

Transcription factor ETV1 is essential for rapid conduction in the heart.

Published in:

2016

By:

Shekhar, Akshay;
Xianming Lin;
Fang-Yu Liu;
Jie Zhang;
Huan Mo;
Bastarache, Lisa;
Denny, Joshua C.;
Cox, Nancy J.;
Delmar, Mario;
Roden, Dan M.;
Fishman, Glenn I.;
Park, David S.;
Lin, Xianming;
Liu, Fang-Yu;
Zhang, Jie;
Mo, Huan

Publication type:

journal article

Voriconazole metabolism is associated with the number of skin cancers per patient.

Published in:

Archives of Dermatological Research, 2024, v. 316, n. 6, p. 1, doi. 10.1007/s00403-024-03135-5

By:

Ike, Jacqueline I.;
Smith, Isabelle T.;
Mosley, Dominique;
Madden, Christopher;
Grossarth, Sarah;
Halle, Briana R.;
Lewis, Adam;
Mentch, Frank;
Hakonarson, Hakon;
Bastarache, Lisa;
Wheless, Lee

Publication type:

Article

Quantifying the phenome‐wide disease burden of obesity using electronic health records and genomics.

Published in:

Obesity (19307381), 2022, v. 30, n. 12, p. 2477, doi. 10.1002/oby.23561

By:

Robinson, Jamie R.;
Carroll, Robert J.;
Bastarache, Lisa;
Chen, Qingxia;
Pirruccello, James;
Mou, Zongyang;
Wei, Wei‐Qi;
Connolly, John;
Mentch, Frank;
Crane, Paul K.;
Hebbring, Scott J.;
Crosslin, David R.;
Gordon, Adam S.;
Rosenthal, Elisabeth A.;
Stanaway, Ian B.;
Hayes, M. Geoffrey;
Wei, Wei;
Petukhova, Lynn;
Namjou‐Khales, Bahram;
Zhang, Ge

Publication type:

Article

Comparison of HLA allelic imputation programs.

Published in:

PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0172444

By:

Karnes, Jason H.;
Shaffer, Christian M.;
Bastarache, Lisa;
Gaudieri, Silvana;
Glazer, Andrew M.;
Steiner, Heidi E.;
Mosley, Jonathan D.;
Mallal, Simon;
Denny, Joshua C.;
Phillips, Elizabeth J.;
Roden, Dan M.

Publication type:

Article

Association of Genetic Risk of Obesity with Postoperative Complications Using Mendelian Randomization.

Published in:

World Journal of Surgery, 2020, v. 44, n. 1, p. 84, doi. 10.1007/s00268-019-05202-9

By:

Robinson, Jamie R.;
Carroll, Robert J.;
Bastarache, Lisa;
Chen, Qingxia;
Mou, Zongyang;
Wei, Wei-Qi;
Connolly, John J.;
Mentch, Frank;
Sleiman, Patrick;
Crane, Paul K.;
Hebbring, Scott J.;
Stanaway, Ian B.;
Crosslin, David R.;
Gordon, Adam S.;
Rosenthal, Elisabeth A.;
Carrell, David;
Hayes, M. Geoffrey;
Wei, Wei;
Petukhova, Lynn;
Namjou, Bahram

Publication type:

Article

Phenome-wide scanning identifies multiple diseases and disease severity phenotypes associated with HLA variants.

Published in:

Science Translational Medicine, 2017, v. 9, n. 389, p. 1, doi. 10.1126/scitranslmed.aai8708

By:

Karnes, Jason H.;
Bastarache, Lisa;
Shaffer, Christian M.;
Gaudieri, Silvana;
Yaomin Xu;
Glazer, Andrew M.;
Mosley, Jonathan D.;
Shilin Zhao;
Raychaudhuri, Soumya;
Mallal, Simon;
Zhan Ye;
Mayer, John G.;
Brilliant, Murray H.;
Hebbring, Scott J.;
Roden, Dan M.;
Phillips, Elizabeth J.;
Denny, Joshua C.

Publication type:

Article

Evaluating phecodes, clinical classification software, and ICD-9-CM codes for phenome-wide association studies in the electronic health record.

Published in:

PLoS ONE, 2017, v. 12, n. 7, p. 1, doi. 10.1371/journal.pone.0175508

By:

Wei, Wei-Qi;
Bastarache, Lisa A.;
Carroll, Robert J.;
Marlo, Joy E.;
Osterman, Travis J.;
Gamazon, Eric R.;
Cox, Nancy J.;
Roden, Dan M.;
Denny, Joshua C.

Publication type:

Article

Defining the complex phenotype of severe systemic loxoscelism using a large electronic health record cohort.

Published in:

PLoS ONE, 2017, v. 12, n. 4, p. 1, doi. 10.1371/journal.pone.0174941

By:

Robinson, Jamie R.;
Kennedy, Vanessa E.;
Doss, Youssef;
Bastarache, Lisa;
Denny, Joshua;
Warner, Jeremy L.

Publication type:

Article

R PheWAS: data analysis and plotting tools for phenome-wide association studies in the R environment.

Published in:

Bioinformatics, 2014, v. 30, n. 16, p. 2375, doi. 10.1093/bioinformatics/btu197

By:

Carroll, Robert J.;
Bastarache, Lisa;
Denny, Joshua C.

Publication type:

Article

PheWAS: demonstrating the feasibility of a phenome-wide scan to discover gene–disease associations.

Published in:

Bioinformatics, 2010, v. 26, n. 9, p. 1205, doi. 10.1093/bioinformatics/btq126

By:

Denny, Joshua C.;
Ritchie, Marylyn D.;
Basford, Melissa A.;
Pulley, Jill M.;
Bastarache, Lisa;
Brown-Gentry, Kristin;
Wang, Deede;
Masys, Dan R.;
Roden, Dan M.;
Crawford, Dana C.;
Barrett, Jeffery

Publication type:

Article

A phenome-wide association study to discover pleiotropic effects of PCSK9, APOB, and LDLR.

Published in:

NPJ Genomic Medicine, 2019, v. 4, n. 1, p. N.PAG, doi. 10.1038/s41525-019-0078-7

By:

Safarova, Maya S.;
Satterfield, Benjamin A.;
Fan, Xiao;
Austin, Erin E.;
Ye, Zhan;
Bastarache, Lisa;
Zheng, Neil;
Ritchie, Marylyn D.;
Borthwick, Kenneth M.;
Williams, Marc S.;
Larson, Eric B.;
Scrol, Aaron;
Jarvik, Gail P.;
Crosslin, David R.;
Leppig, Kathleen;
Rasmussen-Torvik, Laura J.;
Pendergrass, Sarah A.;
Sturm, Amy C.;
Namjou, Bahram;
Shah, Amy Sanghavi

Publication type:

Article

A phenome-wide association study to discover pleiotropic effects of PCSK9, APOB, and LDLR.

Published in:

NPJ Genomic Medicine, 2019, v. 4, n. 1, p. N.PAG, doi. 10.1038/s41525-019-0078-7

By:

Safarova, Maya S.;
Satterfield, Benjamin A.;
Fan, Xiao;
Austin, Erin E.;
Ye, Zhan;
Bastarache, Lisa;
Zheng, Neil;
Ritchie, Marylyn D.;
Borthwick, Kenneth M.;
Williams, Marc S.;
Larson, Eric B.;
Scrol, Aaron;
Jarvik, Gail P.;
Crosslin, David R.;
Leppig, Kathleen;
Rasmussen-Torvik, Laura J.;
Pendergrass, Sarah A.;
Sturm, Amy C.;
Namjou, Bahram;
Shah, Amy Sanghavi

Publication type:

Article

11 Novel Systematic Method for Identifying Congenital Anomaly Cases in Electronic Health Record Databases.

Published in:

2024

By:

Brokamp, Elly;
Bastarache, Lisa;
Cox, Nancy;
Hamid, Rizwan;
Khanakari, Nikhil K.;
Hooker, Gillian;
Shuey, Megan

Publication type:

Abstract

Unmet social needs and diverticulitis: a phenotyping algorithm and cross-sectional analysis.

Published in:

Journal of the American Medical Informatics Association, 2025, v. 32, n. 5, p. 866, doi. 10.1093/jamia/ocae238

By:

Ueland, Thomas E;
Younan, Samuel A;
Evans, Parker T;
Sims, Jessica;
Shroder, Megan M;
Hawkins, Alexander T;
Peek, Richard;
Niu, Xinnan;
Bastarache, Lisa;
Robinson, Jamie R

Publication type:

Article

Comparison of phenomic profiles in the All of Us Research Program against the US general population and the UK Biobank.

Published in:

Journal of the American Medical Informatics Association, 2024, v. 31, n. 4, p. 846, doi. 10.1093/jamia/ocad260

By:

Zeng, Chenjie;
Schlueter, David J;
Tran, Tam C;
Babbar, Anav;
Cassini, Thomas;
Bastarache, Lisa A;
Denny, Josh C

Publication type:

Article

Systematic replication of smoking disease associations using survey responses and EHR data in the All of Us Research Program.

Published in:

Journal of the American Medical Informatics Association, 2024, v. 31, n. 1, p. 139, doi. 10.1093/jamia/ocad205

By:

Schlueter, David J;
Sulieman, Lina;
Mo, Huan;
Keaton, Jacob M;
Ferrara, Tracey M;
Williams, Ariel;
Qian, Jun;
Stubblefield, Onajia;
Zeng, Chenjie;
Tran, Tam C;
Bastarache, Lisa;
Dai, Jian;
Babbar, Anav;
Ramirez, Andrea;
Goleva, Slavina B;
Denny, Joshua C

Publication type:

Article

Knowledgebase strategies to aid interpretation of clinical correlation research.

Published in:

Journal of the American Medical Informatics Association, 2023, v. 30, n. 7, p. 1257, doi. 10.1093/jamia/ocad078

By:

Stead, William W;
Lewis, Adam;
Giuse, Nunzia B;
Koonce, Taneya Y;
Bastarache, Lisa

Publication type:

Article

A research agenda to support the development and implementation of genomics-based clinical informatics tools and resources.

Published in:

2022

By:

Wiley, Ken;
Findley, Laura;
Goldrich, Madison;
Rakhra-Burris, Tejinder K;
Stevens, Ana;
Williams, Pamela;
Bult, Carol J;
Chisholm, Rex;
Deverka, Patricia;
Ginsburg, Geoffrey S;
Green, Eric D;
Jarvik, Gail;
Mensah, George A;
Ramos, Erin;
Relling, Mary V;
Roden, Dan M;
Rowley, Robb;
Alterovitz, Gil;
Aronson, Samuel;
Bastarache, Lisa

Publication type:

journal article

Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers.

Published in:

2021

By:

Madhavan, Subha;
Bastarache, Lisa;
Brown, Jeffrey S;
Butte, Atul J;
Dorr, David A;
Embi, Peter J;
Friedman, Charles P;
Johnson, Kevin B;
Moore, Jason H;
Kohane, Isaac S;
Payne, Philip R O;
Tenenbaum, Jessica D;
Weiner, Mark G;
Wilcox, Adam B;
Ohno-Machado, Lucila

Publication type:

journal article

Improving the phenotype risk score as a scalable approach to identifying patients with Mendelian disease.

Published in:

2019

By:

Bastarache, Lisa;
Hughey, Jacob J;
Goldstein, Jeffrey A;
Bastraache, Julie A;
Das, Satya;
Zaki, Neil Charles;
Zeng, Chenjie;
Tang, Leigh Anne;
Roden, Dan M;
Denny, Joshua C

Publication type:

journal article

Genetic predisposition may not improve prediction of cardiac surgery-associated acute kidney injury.

Published in:

Frontiers in Genetics, 2023, p. 1, doi. 10.3389/fgene.2023.1094908

By:

Douville, Nicholas J.;
Larach, Daniel B.;
Lewis, Adam;
Bastarache, Lisa;
Pandit, Anita;
Jing He;
Heung, Michael;
Mathis, Michael;
Wanderer, Jonathan P.;
Kheterpal, Sachin;
Surakka, Ida;
Kertai, Miklos D.

Publication type:

Article

Clinical associations with a polygenic predisposition to benign lower white blood cell counts.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-47804-5

By:

Mosley, Jonathan D.;
Shelley, John P.;
Dickson, Alyson L.;
Zanussi, Jacy;
Daniel, Laura L.;
Zheng, Neil S.;
Bastarache, Lisa;
Wei, Wei-Qi;
Shi, Mingjian;
Jarvik, Gail P.;
Rosenthal, Elisabeth A.;
Khan, Atlas;
Sherafati, Alborz;
Kullo, Iftikhar J.;
Walunas, Theresa L.;
Glessner, Joseph;
Hakonarson, Hakon;
Cox, Nancy J.;
Roden, Dan M.;
Frangakis, Stephan G.

Publication type:

Article

Exploiting the GTEx resources to decipher the mechanisms at GWAS loci.

Published in:

Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-020-02252-4

By:

Barbeira, Alvaro N.;
Bonazzola, Rodrigo;
Gamazon, Eric R.;
Liang, Yanyu;
Park, YoSon;
Kim-Hellmuth, Sarah;
Wang, Gao;
Jiang, Zhuoxun;
Zhou, Dan;
Hormozdiari, Farhad;
Liu, Boxiang;
Rao, Abhiram;
Hamel, Andrew R.;
Pividori, Milton D.;
Aguet, François;
Bastarache, Lisa;
Jordan, Daniel M.;
Verbanck, Marie;
Do, Ron;
Stephens, Matthew

Publication type:

Article

Genetic variants associated with sepsis-associated acute kidney injury.

Published in:

PLoS ONE, 2024, v. 19, n. 12, p. 1, doi. 10.1371/journal.pone.0311318

By:

Douville, Nicholas J.;
Bastarache, Lisa;
Bertucci-Richter, Emily;
Patil, Snehal;
Jewell, Elizabeth S.;
Freundlich, Robert E.;
Kertai, Miklos D.;
Engoren, Milo C.

Publication type:

Article

Natural Language Processing Improves Identification of Colorectal Cancer Testing in the Electronic Medical Record.

Published in:

2012

By:

Denny, Joshua C.;
Choma, Neesha N.;
Peterson, Josh F.;
Miller, Randolph A.;
Bastarache, Lisa;
Li, Ming;
Peterson, Neeraja B.

Publication type:

Journal Article

Identifying genetically driven clinical phenotypes using linear mixed models.

Published in:

Nature Communications, 2016, v. 7, n. 4, p. 11433, doi. 10.1038/ncomms11433

By:

Mosley, Jonathan D.;
Witte, John S.;
Larkin, Emma K.;
Bastarache, Lisa;
Shaffer, Christian M.;
Karnes, Jason H.;
Stein, C. Michael;
Phillips, Elizabeth;
Hebbring, Scott J.;
Brilliant, Murray H.;
Mayer, John;
Ye, Zhan;
Roden, Dan M.;
Denny, Joshua C.

Publication type:

Article

Joint mouse-human phenome-wide association to test gene function and disease risk.

Published in:

Nature Communications, 2016, v. 7, n. 2, p. 10464, doi. 10.1038/ncomms10464

By:

Wang, Xusheng;
Pandey, Ashutosh K.;
Mulligan, Megan K.;
Williams, Evan G.;
Mozhui, Khyobeni;
Li, Zhengsheng;
Jovaisaite, Virginija;
Quarles, L. Darryl;
Xiao, Zhousheng;
Huang, Jinsong;
Capra, John A.;
Chen, Zugen;
Taylor, William L.;
Bastarache, Lisa;
Niu, Xinnan;
Pollard, Katherine S.;
Ciobanu, Daniel C.;
Reznik, Alexander O.;
Tishkov, Artem V.;
Zhulin, Igor B.

Publication type:

Article

PregOMICS—Leveraging systems biology and bioinformatics for drug repurposing in maternal‐child health.

Published in:

American Journal of Reproductive Immunology, 2018, v. 80, n. 2, p. 1, doi. 10.1111/aji.12971

By:

Goldstein, Jeffery A.;
Bastarache, Lisa A.;
Denny, Joshua C.;
Pulley, Jill M.;
Aronoff, David M.

Publication type:

Article

A genome- and phenome-wide association study to identify genetic variants influencing platelet count and volume and their pleiotropic effects.

Published in:

Human Genetics, 2014, v. 133, n. 1, p. 95, doi. 10.1007/s00439-013-1355-7

By:

Shameer, Khader;
Denny, Joshua;
Ding, Keyue;
Jouni, Hayan;
Crosslin, David;
Andrade, Mariza;
Chute, Christopher;
Peissig, Peggy;
Pacheco, Jennifer;
Li, Rongling;
Bastarache, Lisa;
Kho, Abel;
Ritchie, Marylyn;
Masys, Daniel;
Chisholm, Rex;
Larson, Eric;
McCarty, Catherine;
Roden, Dan;
Jarvik, Gail;
Kullo, Iftikhar

Publication type:

Article

Pulling the covers in electronic health records for an association study with self-reported sleep behaviors.

Published in:

Chronobiology International: The Journal of Biological & Medical Rhythm Research, 2018, v. 35, n. 12, p. 1702, doi. 10.1080/07420528.2018.1508152

By:

Rhoades, Seth D.;
Bastarache, Lisa;
Denny, Joshua C.;
Hughey, Jacob J.

Publication type:

Article

Developing real‐world evidence from real‐world data: Transforming raw data into analytical datasets.

Published in:

Learning Health Systems, 2022, v. 6, n. 1, p. 1, doi. 10.1002/lrh2.10293

By:

Bastarache, Lisa;
Brown, Jeffrey S.;
Cimino, James J.;
Dorr, David A.;
Embi, Peter J.;
Payne, Philip R.O.;
Wilcox, Adam B.;
Weiner, Mark G.

Publication type:

Article

Phenome-wide association studies demonstrating pleiotropy of genetic variants within FTO with and without adjustment for body mass index.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00250

By:

Cronin, Robert M.;
Field, Julie R.;
Bradford, Yuki;
Shaffer, Christian M.;
Carroll, Robert J.;
Mosley, Jonathan D.;
Bastarache, Lisa;
Edwards, Todd L.;
Hebbring, Scott J.;
Lin, Simon;
Hindorff, Lucia A.;
Crane, Paul K.;
Pendergrass, Sarah A.;
Ritchie, Marylyn D.;
Crawford, Dana C.;
Pathak, Jyotishman;
Bielinski, Suzette J.;
Carrell, David S.;
Crosslin, David R.;
Ledbetter, David H.

Publication type:

Article

A study paradigm integrating prospective epidemiologic cohorts and electronic health records to identify disease biomarkers.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-05624-4

By:

Mosley, Jonathan D.;
Feng, QiPing;
Wells, Quinn S.;
Van Driest, Sara L.;
Shaffer, Christian M.;
Edwards, Todd L.;
Bastarache, Lisa;
Wei, Wei-Qi;
Davis, Lea K.;
McCarty, Catherine A.;
Thompson, Will;
Chute, Christopher G.;
Jarvik, Gail P.;
Gordon, Adam S.;
Palmer, Melody R.;
Crosslin, David R.;
Larson, Eric B.;
Carrell, David S.;
Kullo, Iftikhar J.;
Pacheco, Jennifer A.

Publication type:

Article

Phenome-Wide Association Studies.

Published in:

JAMA: Journal of the American Medical Association, 2022, v. 327, n. 1, p. 75, doi. 10.1001/jama.2021.20356

By:

Bastarache, Lisa;
Denny, Joshua C.;
Roden, Dan M.

Publication type:

Article