Works by Bassaganyas, Laia

Results: 17

Integrated multi-omics profiling of high-grade estrogen receptor-positive, HER2-negative breast cancer.

Published in:

Molecular Oncology, 2022, v. 16, n. 12, p. 2413, doi. 10.1002/1878-0261.13043

By:

Kang Wang;
Lun Li;
Franch-Expósito, Sebastià;
Xin Le;
Jun Tang;
Qing Li;
Qianxue Wu;
Bassaganyas, Laia;
Camps, Jordi;
Xiang Zhang;
Hongyuan Li;
Foukakis, Theodoros;
Tingxiu Xiang;
Jiong Wu;
Guosheng Ren

Publication type:

Article

Molecular portrait of high alpha-fetoprotein in hepatocellular carcinoma: implications for biomarker-driven clinical trials.

Published in:

2019

By:

Montal, Robert;
Andreu-Oller, Carmen;
Bassaganyas, Laia;
Esteban-Fabró, Roger;
Moran, Sebastián;
Montironi, Carla;
Moeini, Agrin;
Pinyol, Roser;
Peix, Judit;
Cabellos, Laia;
Villanueva, Augusto;
Sia, Daniela;
Mazzaferro, Vincenzo;
Esteller, Manel;
Llovet, Josep M.

Publication type:

journal article

A Mitochondrial tRNA Mutation Causes Axonal CMT in a Large Venezuelan Family.

Published in:

2020

By:

Fay, Alexander;
Garcia, Yngo;
Margeta, Marta;
Maharjan, Sunita;
Jürgensen, Claudia;
Briceño, Jose;
Garcia, Mariaelena;
Yin, Sitao;
Bassaganyas, Laia;
McMahon, Thomas;
Hou, Ya‐Ming;
Fu, Ying‐Hui;
Ptáček, Louis J.;
Hou, Ya-Ming;
Fu, Ying-Hui

Publication type:

journal article

Worldwide population distribution of the common LCE3C-LCE3B deletion associated with psoriasis and other autoimmune disorders.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-261

By:

Bassaganyas, Laia;
Riveira-Muñoz, Eva;
García-Aragonés, Manel;
González, Juan R.;
Cáceres, Mario;
Armengol, Lluís;
Estivill, Xavier

Publication type:

Article

Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia.

Published in:

Nature, 2011, v. 475, n. 7354, p. 101, doi. 10.1038/nature10113

By:

Puente, Xose S.;
Pinyol, Magda;
Quesada, Víctor;
Conde, Laura;
Ordóñez, Gonzalo R.;
Villamor, Neus;
Escaramis, Georgia;
Jares, Pedro;
Beà, Sílvia;
González-Díaz, Marcos;
Bassaganyas, Laia;
Baumann, Tycho;
Juan, Manel;
López-Guerra, Mónica;
Colomer, Dolors;
Tubío, José M. C.;
López, Cristina;
Navarro, Alba;
Tornador, Cristian;
Aymerich, Marta

Publication type:

Article

Frequency of pathogenic germline variants in cancer susceptibility genes in 1336 renal cell carcinoma cases.

Published in:

Human Molecular Genetics, 2022, v. 31, n. 17, p. 3001, doi. 10.1093/hmg/ddac089

By:

Yngvadottir, Bryndis;
Andreou, Avgi;
Bassaganyas, Laia;
Larionov, Alexey;
Cornish, Alex J;
Chubb, Daniel;
Saunders, Charlie N;
Smith, Philip S;
Zhang, Huairen;
Cole, Yasemin;
Consortium, Genomics England Research;
Larkin, James;
Browning, Lisa;
Turajlic, Samra;
Litchfield, Kevin;
Houlston, Richard S;
Maher, Eamonn R

Publication type:

Article

Elongin C (ELOC/TCEB1)-associated von Hippel–Lindau disease.

Published in:

Human Molecular Genetics, 2022, v. 31, n. 16, p. 2728, doi. 10.1093/hmg/ddac066

By:

Andreou, Avgi;
Yngvadottir, Bryndis;
Bassaganyas, Laia;
Clark, Graeme;
Martin, Ezequiel;
Whitworth, James;
Cornish, Alex J;
Consortium, Genomics England Research;
Houlston, Richard S;
Rich, Philip;
Egan, Catherine;
Hodgson, Shirley V;
Warren, Anne Y;
Snape, Katie;
Maher, Eamonn R

Publication type:

Article

Whole exome and whole genome sequencing with dried blood spot DNA without whole genome amplification.

Published in:

Human Mutation, 2018, v. 39, n. 1, p. 167, doi. 10.1002/humu.23356

By:

Bassaganyas, Laia;
Freedman, George;
Vaka, Dedeepya;
Wan, Eunice;
Lao, Richard;
Chen, Flavia;
Kvale, Mark;
Currier, Robert J.;
Puck, Jennifer M.;
Kwok, Pui‐Yan

Publication type:

Article

A Role for CD154, the CD40 Ligand, in Granulomatous Inflammation.

Published in:

Mediators of Inflammation, 2017, p. 1, doi. 10.1155/2017/2982879

By:

Villeneuve, Julien;
Desmoulière, Alexis;
Dewitte, Antoine;
Bordeau, Nelly;
Costet, Pierre;
Bassaganyas, Laia;
Fricain, Jean-Christophe;
Ripoche, Jean;
Lepreux, Sébastien

Publication type:

Article

PCIG: a web-based application to explore immune–genomics interactions across cancer types.

Published in:

Bioinformatics, 2022, v. 38, n. 8, p. 2374, doi. 10.1093/bioinformatics/btac111

By:

Pedrola, Anna;
Franch-Expósito, Sebastià;
Lahoz, Sara;
Esteban-Fabró, Roger;
Dienstmann, Rodrigo;
Bassaganyas, Laia;
Camps, Jordi

Publication type:

Article

New factors for protein transport identified by a genome-wide CRISPRi screen in mammalian cells.

Published in:

Journal of Cell Biology, 2019, v. 218, n. 11, p. 3861, doi. 10.1083/jcb.201902028

By:

Bassaganyas, Laia;
Popa, Stephanie J.;
Horlbeck, Max;
Puri, Claudia;
Stewart, Sarah E.;
Campelo, Felix;
Ashok, Anupama;
Butnaru, Cristian M.;
Brouwers, Nathalie;
Heydari, Kartoosh;
Ripoche, Jean;
Weissman, Jonathan;
Rubinsztein, David C.;
Schekman, Randy;
Malhotra, Vivek;
Moreau, Kevin;
Villeneuve, Julien

Publication type:

Article

Unconventional secretion of FABP4 by endosomes and secretory lysosomes.

Published in:

Journal of Cell Biology, 2018, v. 217, n. 2, p. 649, doi. 10.1083/jcb.201705047

By:

Villeneuve, Julien;
Bassaganyas, Laia;
Lepreux, Sebastien;
Chiritoiu, Marioara;
Costet, Pierre;
Ripoche, Jean;
Malhotra, Vivek;
Schekman, Randy

Publication type:

Article

PeSV-Fisher: Identification of Somatic and Non-Somatic Structural Variants Using Next Generation Sequencing Data

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063377

By:

Escaramís, Geòrgia;
Tornador, Cristian;
Bassaganyas, Laia;
Rabionet, Raquel;
Tubio, Jose M. C.;
Martínez-Fundichely, Alexander;
Cáceres, Mario;
Gut, Marta;
Ossowski, Stephan;
Estivill, Xavier

Publication type:

Article

Evolutionary Dynamics of the Ty3/Gypsy LTR Retrotransposons in the Genome of Anopheles gambiae.

Published in:

PLoS ONE, 2011, v. 6, n. 1, p. 1, doi. 10.1371/journal.pone.0016328

By:

Tubio, Jose Manuel C.;
Tojo, Marta;
Bassaganyas, Laia;
Escaramis, Georgia;
Sharakhov, Igor V.;
Sharakhova, Maria V.;
Tornador, Cristian;
Unger, Maria F.;
Naveira, Horacio;
Costas, Javier;
Besansky, Nora J.

Publication type:

Article

CNApp, a tool for the quantification of copy number alterations and integrative analysis revealing clinical implications.

Published in:

eLife, 2020, p. 1, doi. 10.7554/eLife.50267

By:

Franch-Expósito, Sebastià;
Bassaganyas, Laia;
Vila-Casadesús, Maria;
Hernández-Illán, Eva;
Esteban-Fabró, Roger;
Díaz-Gay, Marcos;
Lozano, Juan José;
Castells, Antoni;
Llovet, Josep Maria;
Castellví-Bel, Sergi;
Camps, Jordi

Publication type:

Article

Inferring ligand-receptor cellular networks from bulk and spatial transcriptomic datasets with BulkSignalR.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 10, p. 4726, doi. 10.1093/nar/gkad352

By:

Villemin, Jean-Philippe;
Bassaganyas, Laia;
Pourquier, Didier;
Boissière, Florence;
Cabello-Aguilar, Simon;
Crapez, Evelyne;
Tanos, Rita;
Cornillot, Emmanuel;
Turtoi, Andrei;
Colinge, Jacques

Publication type:

Article

Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia.

Published in:

Nature Genetics, 2012, v. 44, n. 1, p. 47, doi. 10.1038/ng.1032

By:

Quesada, Víctor;
Conde, Laura;
Villamor, Neus;
Ordóñez, Gonzalo R;
Jares, Pedro;
Bassaganyas, Laia;
Ramsay, Andrew J;
Beà, Sílvia;
Pinyol, Magda;
Martínez-Trillos, Alejandra;
López-Guerra, Mónica;
Colomer, Dolors;
Navarro, Alba;
Baumann, Tycho;
Aymerich, Marta;
Rozman, María;
Delgado, Julio;
Giné, Eva;
Hernández, Jesús M;
González-Díaz, Marcos

Publication type:

Article