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Results and lessons learned from the sbv IMPROVER metagenomics diagnostics for inflammatory bowel disease challenge.
- Published in:
- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-33050-0
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- Article
Identify, quantify and characterize cellular communication from single-cell RNA sequencing data with scSeqComm.
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- Bioinformatics, 2022, v. 38, n. 7, p. 1920, doi. 10.1093/bioinformatics/btac036
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- Article
ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy.
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- Bioinformatics, 2021, v. 37, n. 22, p. 4253, doi. 10.1093/bioinformatics/btab431
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- Article
Cellular population dynamics shape the route to human pluripotency.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37270-w
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- Article
Nilotinib‐induced bone marrow CD34+/lin‐Ph+ cells early clearance in newly diagnosed CP‐Chronic Myeloid Leukemia: Final report of the PhilosoPhi34 study.
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- European Journal of Haematology, 2021, v. 107, n. 4, p. 436, doi. 10.1111/ejh.13680
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- Article
Investigating differential abundance methods in microbiome data: A benchmark study.
- Published in:
- PLoS Computational Biology, 2022, v. 18, n. 9, p. 1, doi. 10.1371/journal.pcbi.1010467
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- Article
metaSPARSim: a 16S rRNA gene sequencing count data simulator.
- Published in:
- BMC Bioinformatics, 2019, v. 20, p. 1, doi. 10.1186/s12859-019-2882-6
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- Article
A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-4011-0
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- Article
Single-Cell RNA-Sequencing: Assessment of Differential Expression Analysis Methods.
- Published in:
- Frontiers in Genetics, 2017, p. 1, doi. 10.3389/fgene.2017.00062
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- Article
Optimizing PCR primers targeting the bacterial 16S ribosomal RNA gene.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2360-6
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- Article
MAST: a hybrid Multi-Agent Spatio-Temporal model of tumor microenvironment informed using a data-driven approach.
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- Bioinformatics Advances, 2022, v. 2, n. 1, p. 1, doi. 10.1093/bioadv/vbac092
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- Article
Nilotinib interferes with cell cycle, ABC transporters and JAK-STAT signaling pathway in CD34+/lin- cells of patients with chronic phase chronic myeloid leukemia after 12 months of treatment.
- Published in:
- PLoS ONE, 2019, v. 14, n. 7, p. 1, doi. 10.1371/journal.pone.0218444
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- Article
Beware to ignore the rare: how imputing zero-values can improve the quality of 16S rRNA gene studies results.
- Published in:
- BMC Bioinformatics, 2022, v. 22, n. 15, p. 1, doi. 10.1186/s12859-022-04587-0
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- Publication type:
- Article
SPARSim single cell: a count data simulator for scRNA-seq data.
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- Bioinformatics, 2020, v. 36, n. 5, p. 1468, doi. 10.1093/bioinformatics/btz752
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- Article