Works by Barrios, Andrés Fernando González

Results: 38

Non-Nucleoside Lycorine-Based Analogs as Potential DENV/ZIKV NS5 Dual Inhibitors: Structure-Based Virtual Screening and Chemoinformatic Analysis.

Published in:

Metabolites (2218-1989), 2024, v. 14, n. 10, p. 519, doi. 10.3390/metabo14100519

By:

Rodríguez-Ararat, Adrián Camilo;
Hayek-Orduz, Yasser;
Vásquez, Andrés-Felipe;
Sierra-Hurtado, Felipe;
Villegas-Torres, María-Francisca;
Caicedo-Burbano, Paola A.;
Achenie, Luke E. K.;
Barrios, Andrés Fernando González

Publication type:

Article

A Holistic Approach from Systems Biology Reveals the Direct Influence of the Quorum-Sensing Phenomenon on Pseudomonas aeruginosa Metabolism to Pyoverdine Biosynthesis.

Published in:

Metabolites (2218-1989), 2023, v. 13, n. 5, p. 659, doi. 10.3390/metabo13050659

By:

Clavijo-Buriticá, Diana Carolina;
Arévalo-Ferro, Catalina;
González Barrios, Andrés Fernando

Publication type:

Article

Unraveling the Genome of a High Yielding Colombian Sugarcane Hybrid.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.694859

By:

Trujillo-Montenegro, Jhon Henry;
Rodríguez Cubillos, María Juliana;
Loaiza, Cristian Darío;
Quintero, Manuel;
Espitia-Navarro, Héctor Fabio;
Salazar Villareal, Fredy Antonio;
Viveros Valens, Carlos Arturo;
González Barrios, Andrés Fernando;
De Vega, José;
Duitama, Jorge;
Riascos, John J.

Publication type:

Article

From industrial by‐products to value‐added compounds: the design of efficient microbial cell factories by coupling systems metabolic engineering and bioprocesses.

Published in:

Biofuels, Bioproducts & Biorefining, 2020, v. 14, n. 6, p. 1228, doi. 10.1002/bbb.2127

By:

Rangel, Albert E. T.;
Gómez Ramírez, Jorge Mario;
González Barrios, Andrés Fernando

Publication type:

Article

Clostridium butyricum population balance model: Predicting dynamic metabolic flux distributions using an objective function related to extracellular glycerol content.

Published in:

PLoS ONE, 2018, v. 13, n. 12, p. 1, doi. 10.1371/journal.pone.0209447

By:

Serrano-Bermúdez, Luis Miguel;
González Barrios, Andrés Fernando;
Montoya, Dolly

Publication type:

Article

Aproximaciones biológicas y isicoquímicas en el tratamiento de contaminantes: un resumen del aporte de la Universidad de los Andes.

Published in:

Revista de Ingeniería, 2009, n. 30, p. 100, doi. 10.16924/riua.v0i30.233

By:

Garzón, Jenny Dussán;
Vives-Florez, Martha Joseina;
Sarria, Víctor Manuel;
Medina, Oscar Fernando Sánchez;
Delgado, Luis Fernando;
Sierra, Sebastián Hernández;
González Barrios, Andrés Fernando

Publication type:

Article

Predicting the microalgae lipid profile obtained by supercritical fluid extraction using a machine learning model.

Published in:

Frontiers in Chemistry, 2024, p. 1, doi. 10.3389/fchem.2024.1480887

By:

Rangel Pinto, Juan David;
Guerrero, Jose L.;
Rivera, Lorena;
Parada-Pinilla, María Paula;
Cala, Mónica P.;
López, Gina;
González Barrios, Andrés Fernando

Publication type:

Article

Comparative analysis for three different immobilisation strategies in the hexavalent chromium biosorption process using Bacillus sphaericus S-layer.

Published in:

Canadian Journal of Chemical Engineering, 2011, v. 89, n. 5, p. 1281, doi. 10.1002/cjce.20515

By:

Carrero, Diana Marcela;
Morales, Johanna Maritza;
Garcia, Andrea Carolina;
Florez, Nathalia;
Delgado, Paula Andrea;
Dussan, Jenny;
Uribe, Andrés Córdoba;
Barrios, Andrés Fernando González

Publication type:

Article

FlavorMiner: a machine learning platform for extracting molecular flavor profiles from structural data.

Published in:

Journal of Cheminformatics, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13321-024-00935-9

By:

Herrera-Rocha, Fabio;
Fernández-Niño, Miguel;
Duitama, Jorge;
Cala, Mónica P.;
Chica, María José;
Wessjohann, Ludger A.;
Davari, Mehdi D.;
Barrios, Andrés Fernando González

Publication type:

Article

Molecular dynamics approach to investigate the coupling of the hydrophilic–lipophilic balance with the configuration distribution function in biosurfactant-based emulsions.

Published in:

Journal of Molecular Modeling, 2013, v. 19, n. 12, p. 5539, doi. 10.1007/s00894-013-2050-2

By:

Álvarez Vanegas, Melissa;
Macías Lozano, Angie;
Núñez Vélez, Vanessa;
Garcés Ferreira, Nathalia;
Castro Barrera, Harold;
Álvarez Solano, Oscar;
González Barrios, Andrés Fernando

Publication type:

Article

Evaluation of roasting and storage conditions as a strategy to improve the sensory characteristics and shelf life of coffee.

Published in:

Food Science & Technology International, 2024, v. 30, n. 3, p. 207, doi. 10.1177/10820132221139890

By:

Barrera-López, Jenny;
González-Barrios, Andrés Fernando;
Vélez, Luis Fernando;
Tarquino, Luis Fernando;
López, Hugo;
Hernandez-Carrión, María

Publication type:

Article

Development of a group contribution method for estimating free energy of peptides in a dodecane-water system via molecular dynamic simulations.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-1399-5

By:

Mora Osorio, Camilo Andrés;
González Barrios, Andrés Fernando

Publication type:

Article

Compartmentalized metabolic network reconstruction of microbial communities to determine the effect of agricultural intervention on soils.

Published in:

PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0181826

By:

Alvarez-Silva, María Camila;
Álvarez-Yela, Astrid Catalina;
Gómez-Cano, Fabio;
Zambrano, María Mercedes;
Husserl, Johana;
Danies, Giovanna;
Restrepo, Silvia;
González-Barrios, Andrés Fernando

Publication type:

Article

A synthetic multi-cellular network of coupled self-sustained oscillators.

Published in:

PLoS ONE, 2017, v. 12, n. 6, p. 1, doi. 10.1371/journal.pone.0180155

By:

Fernández-Niño, Miguel;
Giraldo, Daniel;
Gomez-Porras, Judith Lucia;
Dreyer, Ingo;
González Barrios, Andrés Fernando;
Arevalo-Ferro, Catalina

Publication type:

Article

Clostridium butyricum maximizes growth while minimizing enzyme usage and ATP production: metabolic flux distribution of a strain cultured in glycerol.

Published in:

BMC Systems Biology, 2017, v. 11, p. 1, doi. 10.1186/s12918-017-0434-0

By:

Serrano-Bermúdez, Luis Miguel;
González Barrios, Andrés Fernando;
Maranas, Costas D.;
Montoya, Dolly

Publication type:

Article

Proteins interaction network and modeling of IGVH mutational status in chronic lymphocytic leukemia.

Published in:

Theoretical Biology & Medical Modelling, 2015, v. 12, n. 1, p. 1, doi. 10.1186/s12976-015-0008-z

By:

Álvarez-Silva, María Camila;
Yepes, Sally;
Torres, Maria Mercedes;
González Barrios, Andrés Fernando

Publication type:

Article

Proteins interaction network and modeling of IGVH mutational status in chronic lymphocytic leukemia

Published in:

Theoretical Biology & Medical Modelling, 2015, v. 12, n. 1, p. 12, doi. 10.1186/s12976-015-0008-z

By:

Álvarez-Silva, María Camila;
Yepes, Sally;
Torres, Maria Mercedes;
González Barrios, Andrés Fernando

Publication type:

Article

Modeling of the hypothalamic-pituitary-adrenal axis-mediated interaction between the serotonin regulation pathway and the stress response using a Boolean approximation: a novel study of depression.

Published in:

Theoretical Biology & Medical Modelling, 2013, v. 10, n. 1, p. 1, doi. 10.1186/1742-4682-10-59

By:

Andrés Moreno-Ramos, Oscar;
Lattig, Maria Claudia;
González Barrios, Andrés Fernando

Publication type:

Article

Development of a Chlamydomonas reinhardtii metabolic network dynamic model to describe distinct phenotypes occurring at different CO<sub>2</sub> levels.

Published in:

PeerJ, 2018, p. 1, doi. 10.7717/peerj.5528

By:

Salguero, Daniela Alejandra Mora;
Fernández-Niño, Miguel;
Serrano-Bermúdez, Luis Miguel;
Melo, David O. Páez;
Winck, Flavia V.;
Caldana, Camila;
Barrios, Andrés Fernando González

Publication type:

Article

dyphAI dynamic pharmacophore modeling with AI: a tool for efficient screening of new acetylcholinesterase inhibitors.

Published in:

Frontiers in Chemistry, 2025, p. 1, doi. 10.3389/fchem.2025.1479763

By:

Hayek-Orduz, Yasser;
Acevedo-Castro, Dorian Armando;
Saldarriaga Escobar, Juan Sebastián;
Ortiz-Domínguez, Brandon Eli;
Villegas-Torres, María Francisca;
Caicedo, Paola A.;
Barrera-Ocampo, Álvaro;
Cortes, Natalie;
Osorio, Edison H.;
González Barrios, Andrés Fernando

Publication type:

Article

Dissecting industrial fermentations of fine flavour cocoa through metagenomic analysis.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-88048-3

By:

Fernández-Niño, Miguel;
Rodríguez-Cubillos, María Juliana;
Herrera-Rocha, Fabio;
Anzola, Juan Manuel;
Cepeda-Hernández, Martha Lucia;
Aguirre Mejía, Jenny Lorena;
Chica, María José;
Olarte, Héctor Hugo;
Rodríguez-López, Claudia;
Calderón, Dayana;
Ramírez-Rojas, Adan;
Del Portillo, Patricia;
Restrepo, Silvia;
González Barrios, Andrés Fernando

Publication type:

Article

Transcriptomic analysis of a Clostridium thermocellum strain engineered to utilize xylose: responses to xylose versus cellobiose feeding.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-71428-6

By:

Tafur Rangel, Albert E.;
Croft, Trevor;
González Barrios, Andrés Fernando;
Reyes, Luis H.;
Maness, Pin-Ching;
Chou, Katherine J.

Publication type:

Article

Design and Assembly of a Biofactory for (2 S)-Naringenin Production in Escherichia coli : Effects of Oxygen Transfer on Yield and Gene Expression.

Published in:

Biomolecules (2218-273X), 2023, v. 13, n. 3, p. 565, doi. 10.3390/biom13030565

By:

Parra Daza, Laura E.;
Suarez Medina, Lina;
Tafur Rangel, Albert E.;
Fernández-Niño, Miguel;
Mejía-Manzano, Luis Alberto;
González-Valdez, José;
Reyes, Luis H.;
González Barrios, Andrés Fernando

Publication type:

Article

Impact of the Mode of Extraction on the Lipidomic Profile of Oils Obtained from Selected Amazonian Fruits.

Published in:

Biomolecules (2218-273X), 2019, v. 9, n. 8, p. 329, doi. 10.3390/biom9080329

By:

Cardona Jaramillo, Juliana Erika Cristina;
Carrillo Bautista, Marcela Piedad;
Alvarez Solano, Oscar Alberto;
Achenie, Luke E. K.;
González Barrios, Andrés Fernando

Publication type:

Article

In silico Design for Systems-Based Metabolic Engineering for the Bioconversion of Valuable Compounds From Industrial By-Products.

Published in:

Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.633073

By:

Tafur Rangel, Albert Enrique;
Ríos, Wendy;
Mejía, Daisy;
Ojeda, Carmen;
Carlson, Ross;
Gómez Ramírez, Jorge Mario;
González Barrios, Andrés Fernando

Publication type:

Article

Fagoterapia, alternativa para el control de las infecciones bacterianas. Perspectivas en Colombia.

Published in:

Universitas Scientiarum, 2015, v. 20, n. 1, p. 43, doi. 10.11144/Javeriana.SC20-1.faci

By:

Catalina, Prada-Peñaranda;
Angela-Victoria, Holguín-Moreno;
Andrés-Fernando, González-Barrios;
Martha-Josefina, Vives-Flórez

Publication type:

Article

Effects of processing conditions on hydrolysates of proteins from whole whey and formation of Maillard reaction products.

Published in:

Journal of Food Processing & Preservation, 2021, v. 45, n. 9, p. 1, doi. 10.1111/jfpp.15469

By:

Morales García, Jesús;
Herrera‐Rocha, Fabio;
Cavajalino, Andrés Suarez;
Duran Baron, Ricardo;
González Barrios, Andrés Fernando;
Udenigwe, Chibuike C.

Publication type:

Article

Phage ΦPan70, a Putative Temperate Phage, Controls Pseudomonas aeruginosa in Planktonic, Biofilm and Burn Mouse Model Assays.

Published in:

Viruses (1999-4915), 2015, v. 7, n. 8, p. 4602, doi. 10.3390/v7082835

By:

Holguín, Angela V.;
Rangel, Guillermo;
Clavijo, Viviana;
Prada, Catalina;
Mantilla, Marcela;
Gomez, María Catalina;
Kutter, Elizabeth;
Taylor, Corinda;
Fineran, Peter C.;
González Barrios, Andrés Fernando;
Vives, Martha J.

Publication type:

Article

New Therapeutic Candidates for the Treatment of Malassezia pachydermatis -Associated Infections.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-61729-1

By:

Sastoque, Angie;
Triana, Sergio;
Ehemann, Kevin;
Suarez, Lina;
Restrepo, Silvia;
Wösten, Han;
de Cock, Hans;
Fernández-Niño, Miguel;
González Barrios, Andrés Fernando;
Celis Ramírez, Adriana Marcela

Publication type:

Article

Rational Design of Photo-Electrochemical Hybrid Devices Based on Graphene and Chlamydomonas reinhardtii Light-Harvesting Proteins.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-60408-5

By:

Ortiz-Torres, Martha I.;
Fernández-Niño, Miguel;
Cruz, Juan C.;
Capasso, Andrea;
Matteocci, Fabio;
Patiño, Edgar J.;
Hernández, Yenny;
González Barrios, Andrés Fernando

Publication type:

Article

Genome-Scale Metabolic Models in Fungal Pathogens: Past, Present, and Future.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 19, p. 10852, doi. 10.3390/ijms251910852

By:

Fonseca-Fernández, Angie Lorena;
González Barrios, Andrés Fernando;
Celis Ramírez, Adriana Marcela

Publication type:

Article

Novel covalent and non-covalent complex-based pharmacophore models of SARS-CoV-2 main protease (M<sup>pro</sup>) elucidated by microsecond MD simulations.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-17204-0

By:

Hayek-Orduz, Yasser;
Vásquez, Andrés Felipe;
Villegas-Torres, María Francisca;
Caicedo, Paola A.;
Achenie, Luke E. K.;
González Barrios, Andrés Fernando

Publication type:

Article

Enhancing Wound Healing: A Novel Topical Emulsion Combining CW49 Peptide and Lavender Essential Oil for Accelerated Regeneration and Antibacterial Protection.

Published in:

Pharmaceutics, 2023, v. 15, n. 6, p. 1739, doi. 10.3390/pharmaceutics15061739

By:

Jaramillo, Valentina;
Díaz, Erika;
Muñoz, Laura N.;
González-Barrios, Andrés Fernando;
Rodríguez-Cortina, Jader;
Cruz, Juan C.;
Muñoz-Camargo, Carolina

Publication type:

Article

Classical MD and metadynamics simulations on back-pocket binders of CDK2 and VEGFR2: a guidepost to design novel small-molecule dual inhibitors.

Published in:

Journal of Biomolecular Structure & Dynamics, 2022, v. 40, n. 19, p. 9030, doi. 10.1080/07391102.2021.1922311

By:

Vásquez, Andrés Felipe;
González Barrios, Andrés Fernando

Publication type:

Article

Effects of metabolic engineering on downstream processing operational cost and energy consumption: the case of Escherichia coli's glycerol conversion to succinic acid.

Published in:

Journal of Chemical Technology & Biotechnology, 2018, v. 93, n. 7, p. 2011, doi. 10.1002/jctb.5432

By:

Tafur Rangel, Albert Enrique;
Camelo Valera, Laura Carolina;
Gómez Ramírez, Jorge Mario;
González Barrios, Andrés Fernando

Publication type:

Article

Evaluation of the phenol degradation capacity of microalgae-bacteria consortia from the bay of Cartagena, Colombia.

Published in:

Revista Tecno Lógicas, 2019, v. 21, n. 44, p. 149, doi. 10.22430/22565337.1179

By:

Mora-Salguero, Daniela Alejandra;
Florez, Martha Josefina Vives;
Orjuela, Johanna Husserl;
Fernández-Niño, Miguel;
Barrios, Andrés Fernando González

Publication type:

Article

ELUCIDATING THE ROLE OF METABOLITES AS QUORUM SENSING SIGNALS USING PHASE PLANE ANALYSIS: THE CASE OF INDOLE IN ESCHERICHIA COLI.

Published in:

Journal of Biological Systems, 2014, v. 22, n. 4, p. 523, doi. 10.1142/S0218339014500193

By:

FLÓREZ PARRA, DANIELA CAROLINA;
RAMIREZ TOVAR, VANESSA;
FERNANDO GONZÁLEZ BARRIOS, ANDRÉS

Publication type:

Article

DYNAMIC FLUX BALANCE ANALYSIS FOR PREDICTING GENE OVEREXPRESSION EFFECTS IN BATCH CULTURES.

Published in:

Journal of Biological Systems, 2014, v. 22, n. 3, p. 327, doi. 10.1142/S0218339014500107

By:

BARRETO-RODRIGUEZ, CAROL MILENA;
RAMIREZ-ANGULO, JESSICA PAOLA;
RAMIREZ, JORGE MARIO GOMEZ;
ACHENIE, LUKE;
MOLINA-BULLA, HAROLD;
BARRIOS, ANDRÉS FERNANDO GONZÁLEZ

Publication type:

Article