Works by Baril, Tobias

Results: 17

Phylogenetic analysis of the Tc1/mariner superfamily reveals the unexplored diversity of pogo-like elements.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00212-0

By:

Dupeyron, Mathilde;
Baril, Tobias;
Bass, Chris;
Hayward, Alexander

Publication type:

Article

Millipede genomes reveal unique adaptations during myriapod evolution.

Published in:

PLoS Biology, 2020, v. 18, n. 9, p. 1, doi. 10.1371/journal.pbio.3000636

By:

Qu, Zhe;
Nong, Wenyan;
So, Wai Lok;
Barton-Owen, Tom;
Li, Yiqian;
Leung, Thomas C. N.;
Li, Chade;
Baril, Tobias;
Wong, Annette Y. P.;
Swale, Thomas;
Chan, Ting-Fung;
Hayward, Alexander;
Ngai, Sai-Ming;
Hui, Jerome H. L.

Publication type:

Article

Myriapod genomes reveal ancestral horizontal gene transfer and hormonal gene loss in millipedes.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30690-0

By:

So, Wai Lok;
Nong, Wenyan;
Xie, Yichun;
Baril, Tobias;
Ma, Hai-yao;
Qu, Zhe;
Haimovitz, Jasmine;
Swale, Thomas;
Gaitan-Espitia, Juan Diego;
Lau, Kwok Fai;
Tobe, Stephen S.;
Bendena, William G.;
Kai, Zhen-peng;
Hayward, Alexander;
Hui, Jerome H. L.

Publication type:

Article

Genome‐wide transcriptomic changes reveal the genetic pathways involved in insect migration.

Published in:

Molecular Ecology, 2022, v. 31, n. 16, p. 4332, doi. 10.1111/mec.16588

By:

Doyle, Toby;
Jimenez‐Guri, Eva;
Hawkes, Will L. S.;
Massy, Richard;
Mantica, Federica;
Permanyer, Jon;
Cozzuto, Luca;
Hermoso Pulido, Toni;
Baril, Tobias;
Hayward, Alex;
Irimia, Manuel;
Chapman, Jason W.;
Bass, Chris;
Wotton, Karl R.

Publication type:

Article

Genome of the four-finger threadfin Eleutheronema tetradactylum (Perciforms: Polynemidae).

Published in:

BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-07145-1

By:

Qu, Zhe;
Nong, Wenyan;
Yu, Yifei;
Baril, Tobias;
Yip, Ho Yin;
Hayward, Alexander;
Hui, Jerome H. L.

Publication type:

Article

Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome.

Published in:

BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07027-6

By:

Li, Yiqian;
Nong, Wenyan;
Baril, Tobias;
Yip, Ho Yin;
Swale, Thomas;
Hayward, Alexander;
Ferrier, David E. K.;
Hui, Jerome H. L.

Publication type:

Article

Calling Structural Variants with Confidence from Short-Read Data in Wild Bird Populations.

Published in:

Genome Biology & Evolution, 2024, v. 16, n. 4, p. 1, doi. 10.1093/gbe/evae049

By:

David, Gabriel;
Bertolotti, Alicia;
Layer, Ryan;
Scofield, Douglas;
Hayward, Alexander;
Baril, Tobias;
Burnett, Hamish A;
Gudmunds, Erik;
Jensen, Henrik;
Husby, Arild

Publication type:

Article

A draft genome sequence of the elusive giant squid, Architeuthis dux.

Published in:

GigaScience, 2020, v. 9, n. 1, p. N.PAG, doi. 10.1093/gigascience/giz152

By:

da Fonseca, Rute R;
Couto, Alvarina;
Machado, Andre M;
Brejova, Brona;
Albertin, Carolin B;
Silva, Filipe;
Gardner, Paul;
Baril, Tobias;
Hayward, Alex;
Campos, Alexandre;
Ribeiro, Ângela M;
Barrio-Hernandez, Inigo;
Hoving, Henk-Jan;
Tafur-Jimenez, Ricardo;
Chu, Chong;
Frazão, Barbara;
Petersen, Bent;
Peñaloza, Fernando;
Musacchia, Francesco;
Alexander, Graham C

Publication type:

Article

Migrators within migrators: exploring transposable element dynamics in the monarch butterfly, Danaus plexippus.

Published in:

Mobile DNA, 2022, v. 13, n. 1, p. 1, doi. 10.1186/s13100-022-00263-5

By:

Baril, Tobias;
Hayward, Alexander

Publication type:

Article

A pangenome-guided manually curated library of transposable elements for Zymoseptoria tritici.

Published in:

BMC Research Notes, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13104-023-06613-7

By:

Baril, Tobias;
Croll, Daniel

Publication type:

Article

Genomic Signatures of Domestication in a Fungus Obligately Farmed by Leafcutter Ants.

Published in:

Molecular Biology & Evolution, 2024, v. 41, n. 10, p. 1, doi. 10.1093/molbev/msae197

By:

Leal-Dutra, Caio A;
Vizueta, Joel;
Baril, Tobias;
Kooij, Pepijn W;
Rødsgaard-Jørgensen, Asta;
Conlon, Benjamin H;
Croll, Daniel;
Shik, Jonathan Z

Publication type:

Article

Earl Grey: A Fully Automated User-Friendly Transposable Element Annotation and Analysis Pipeline.

Published in:

Molecular Biology & Evolution, 2024, v. 41, n. 4, p. 1, doi. 10.1093/molbev/msae068

By:

Baril, Tobias;
Galbraith, James;
Hayward, Alex

Publication type:

Article

A New Chromosome-Assigned Mongolian Gerbil Genome Allows Characterization of Complete Centromeres and a Fully Heterochromatic Chromosome.

Published in:

Molecular Biology & Evolution, 2023, v. 40, n. 5, p. 1, doi. 10.1093/molbev/msad115

By:

Brekke, Thomas D;
Papadopulos, Alexander S T;
Julià, Eva;
Fornas, Oscar;
Fu, Beiyuan;
Yang, Fengtang;
de la Fuente, Roberto;
Page, Jesus;
Baril, Tobias;
Hayward, Alexander;
Mulley, John F

Publication type:

Article

Horseshoe crab genomes reveal the evolution of genes and microRNAs after three rounds of whole genome duplication.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-020-01637-2

By:

Nong, Wenyan;
Qu, Zhe;
Li, Yiqian;
Barton-Owen, Tom;
Wong, Annette Y. P.;
Yip, Ho Yin;
Lee, Hoi Ting;
Narayana, Satya;
Baril, Tobias;
Swale, Thomas;
Cao, Jianquan;
Chan, Ting Fung;
Kwan, Hoi Shan;
Ngai, Sai Ming;
Panagiotou, Gianni;
Qian, Pei-Yuan;
Qiu, Jian-Wen;
Yip, Kevin Y.;
Ismail, Noraznawati;
Pati, Siddhartha

Publication type:

Article

The genome sequence of the scarce swallowtail, Iphiclides podalirius.

Published in:

G3: Genes | Genomes | Genetics, 2022, v. 12, n. 9, p. 1, doi. 10.1093/g3journal/jkac193

By:

Mackintosh, Alexander;
Laetsch, Dominik R.;
Baril, Tobias;
Ebdon, Sam;
Jay, Paul;
Vila, Roger;
Hayward, Alex;
Lohse, Konrad

Publication type:

Article

The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome.

Published in:

G3: Genes | Genomes | Genetics, 2022, v. 12, n. 6, p. 1, doi. 10.1093/g3journal/jkac069

By:

Mackintosh, Alexander;
Laetsch, Dominik R.;
Baril, Tobias;
Foster, Robert G.;
Dincă, Vlad;
Vila, Roger;
Hayward, Alexander;
Lohse, Konrad

Publication type:

Article

Chromosomal‐level reference genome of the incense tree Aquilaria sinensis.

Published in:

Molecular Ecology Resources, 2020, v. 20, n. 4, p. 971, doi. 10.1111/1755-0998.13154

By:

Nong, Wenyan;
Law, Sean T. S.;
Wong, Annette Y. P.;
Baril, Tobias;
Swale, Thomas;
Chu, Lee Man;
Hayward, Alexander;
Lau, David T. W.;
Hui, Jerome H. L.

Publication type:

Article