Works matching AU Bai, Yongsheng

Results: 42

Fast Protein Evolution and Germ Line Expression of a Drosophila Parental Gene and Its Young Retroposed Paralog.

Published in:

Molecular Biology & Evolution, 2006, v. 23, n. 11, p. 2191, doi. 10.1093/molbev/msl090

By:

Betrán, Esther;
Bai, Yongsheng;
Motiwale, Mansi

Publication type:

Article

The DEAD‐box helicase RCF1 plays roles in miRNA biogenesis and RNA splicing in Arabidopsis.

Published in:

Plant Journal, 2023, v. 116, n. 1, p. 144, doi. 10.1111/tpj.16366

By:

Xu, Chi;
Zhang, Zhanhui;
He, Juan;
Bai, Yongsheng;
Cui, Jie;
Liu, Lin;
Tang, Jihua;
Tang, Guiliang;
Chen, Xuemei;
Mo, Beixin

Publication type:

Article

Engineering deep learning methods on automatic detection of damage in infrastructure due to extreme events.

Published in:

Structural Health Monitoring, 2023, v. 22, n. 1, p. 338, doi. 10.1177/14759217221083649

By:

Bai, Yongsheng;
Zha, Bing;
Sezen, Halil;
Yilmaz, Alper

Publication type:

Article

Identifying Putative Causal Links between MicroRNAs and Severe COVID-19 Using Mendelian Randomization.

Published in:

Cells (2073-4409), 2021, v. 10, n. 12, p. 3504, doi. 10.3390/cells10123504

By:

Li, Chang;
Wu, Aurora;
Song, Kevin;
Gao, Jeslyn;
Huang, Eric;
Bai, Yongsheng;
Liu, Xiaoming

Publication type:

Article

Pinpointing miRNA and genes enrichment over trait-relevant tissue network in Genome-Wide Association Studies.

Published in:

BMC Medical Genomics, 2020, v. 13, p. 1, doi. 10.1186/s12920-020-00830-w

By:

Li, Binze;
Dong, Julian;
Yu, Jiaqi;
Fan, Yuqi;
Shang, Lulu;
Zhou, Xiang;
Bai, Yongsheng

Publication type:

Article

Clustering analysis of microRNA and mRNA expression data from TCGA using maximum edge-weighted matching algorithms.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0562-z

By:

Ding, Lizhong;
Feng, Zheyun;
Bai, Yongsheng

Publication type:

Article

Ameloblast transcriptome changes from secretory to maturation stages.

Published in:

Connective Tissue Research, 2014, v. 55, p. 29, doi. 10.3109/03008207.2014.923862

By:

Simmer, James P.;
Richardson, Amelia S.;
Wang, Shih-Kai;
Reid, Bryan M.;
Bai, Yongsheng;
Hu, Yuanyuan;
Hu, Jan C.-C.

Publication type:

Article

Computational Identification of Sex-Biased Biomarker MicroRNAs and Genes Associated with Immune Infiltration in Breast Cancer.

Published in:

Genes, 2021, v. 12, n. 4, p. 570, doi. 10.3390/genes12040570

By:

Li, Eric W.;
Bai, Yongsheng

Publication type:

Article

Bioinformatics Analysis Revealed Novel 3′UTR Variants Associated with Intellectual Disability.

Published in:

Genes, 2020, v. 11, n. 9, p. 998, doi. 10.3390/genes11090998

By:

Yang, Junmeng;
Liu, Anna;
He, Isabella;
Bai, Yongsheng

Publication type:

Article

Identification of MicroRNA-Related Tumorigenesis Variants and Genes in the Cancer Genome Atlas (TCGA) Data.

Published in:

Genes, 2020, v. 11, n. 9, p. 953, doi. 10.3390/genes11090953

By:

Li, Chang;
Wu, Brian;
Han, Han;
Zhao, Jeff;
Bai, Yongsheng;
Liu, Xiaoming

Publication type:

Article

Identifying Interaction Clusters for MiRNA and MRNA Pairs in TCGA Network.

Published in:

Genes, 2019, v. 10, n. 9, p. 702, doi. 10.3390/genes10090702

By:

Dai, Xinqing;
Ding, Lizhong;
Liu, Hannah;
Xu, Zesheng;
Jiang, Hui;
Handelman, Samuel K;
Bai, Yongsheng

Publication type:

Article

Comprehensive Pan-Cancer Mutation Density Patterns in Enhancer RNA.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 1, p. 534, doi. 10.3390/ijms25010534

By:

Zhang, Troy;
Yu, Hui;
Jiang, Limin;
Bai, Yongsheng;
Liu, Xiaoyi;
Guo, Yan

Publication type:

Article

Identification of functionally important miRNA targeted genes associated with child obesity trait in genome-wide association studies.

Published in:

BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08576-8

By:

Song, Melinda;
Yu, Jiaqi;
Li, Binze;
Dong, Julian;
Gao, Jeslyn;
Shang, Lulu;
Zhou, Xiang;
Bai, Yongsheng

Publication type:

Article

Identification of potential antimicrobials against Salmonella typhimurium and Listeria monocytogenes using Quantitative Structure-Activity Relation modeling.

Published in:

PLoS ONE, 2017, v. 12, n. 12, p. 1, doi. 10.1371/journal.pone.0189580

By:

Rath, Ethan C.;
Gill, Hunter;
Bai, Yongsheng

Publication type:

Article

Identification of streptococcal small RNAs that are putative targets of RNase III through bioinformatics analysis of RNA sequencing data.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 111, doi. 10.1186/s12859-017-1897-0

By:

Rath, Ethan C.;
Pitman, Stephanie;
Kyu Hong Cho;
Yongsheng Bai

Publication type:

Article

Identification of genome-wide non-canonical spliced regions and analysis of biological functions for spliced sequences using Read-Split-Fly.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 37, doi. 10.1186/s12859-017-1801-y

By:

Yongsheng Bai;
Jeff Kinne;
Lizhong Ding;
Rath, Ethan C.;
Cox, Aaron;
Naidu, Siva Dharman

Publication type:

Article

Functional Genomics, Genetics, and Bioinformatics 2016.

Published in:

BioMed Research International, 2016, v. 2016, p. 1, doi. 10.1155/2016/2625831

By:

Deng, Youping;
Wang, Hongwei;
Hamamoto, Ryuji;
Duan, Shiwei;
Pirooznia, Mehdi;
Bai, Yongsheng

Publication type:

Article

Analyzing the miRNA-Gene Networks to Mine the Important miRNAs under Skin of Human and Mouse.

Published in:

BioMed Research International, 2016, v. 2016, p. 1, doi. 10.1155/2016/5469371

By:

Wu, Jianghong;
Gong, Husile;
Bai, Yongsheng;
Zhang, Wenguang

Publication type:

Article

A 24‐nt miR9560 modulates the transporter gene BrpHMA2 expression in Brassica parachinensis.

Published in:

Plant Genome, 2025, v. 18, n. 1, p. 1, doi. 10.1002/tpg2.70013

By:

Bai, Yongsheng;
Wang, Xiaoting;
Ali, Shahid;
Liu, Yang;
Zhou, Jiannan;
Liu, Meiting;
Liu, Shuai;
Tang, Yulin

Publication type:

Article

Dissecting the biological relationship between TCGA miRNA and mRNA sequencing data using MMiRNA-Viewer.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 63, doi. 10.1186/s12859-016-1219-y

By:

Yongsheng Bai;
Lizhong Ding;
Baker, Steve;
Bai, Jenny M.;
Rath, Ethan;
Feng Jiang;
Jianghong Wu;
Hui Jiang;
Stuart, Gary

Publication type:

Article

Re-hydrolysis characteristics of alkaline fermentation liquid from waste activated sludge: Feasibility as a carbon source for nitrogen removal.

Published in:

Process Safety & Environmental Protection: Transactions of the Institution of Chemical Engineers Part B, 2022, v. 165, p. 230, doi. 10.1016/j.psep.2022.06.064

By:

Liu, Xuyan;
Yang, Hong;
Chang, Jiang;
Bai, Yongsheng;
Shi, Luyuan;
Su, Bojun;
Han, Jun;
Liang, Duo

Publication type:

Article

Study on the effectiveness of an independent biological phosphorus removal system based on immobilized biological fillers nitrogen removal system in municipal wastewater.

Published in:

Process Safety & Environmental Protection: Transactions of the Institution of Chemical Engineers Part B, 2021, v. 156, p. 17, doi. 10.1016/j.psep.2021.09.017

By:

Liu, Xuyan;
Yang, Hong;
Wang, Shaolun;
Fang, Xiaoyue;
Wang, Xiaotong;
Bai, Yongsheng;
Su, Bojun;
Shi, Luyuan

Publication type:

Article

En-WBF: A Novel Ensemble Learning Approach to Wastewater Quality Prediction Based on Weighted BoostForest.

Published in:

Water (20734441), 2024, v. 16, n. 8, p. 1090, doi. 10.3390/w16081090

By:

Su, Bojun;
Zhang, Wen;
Li, Rui;
Bai, Yongsheng;
Chang, Jiang

Publication type:

Article

Two-Dimensional Product Warranty Cost Model under Preventive Maintenance Time Constraints.

Published in:

International Journal of Performability Engineering, 2019, v. 15, n. 4, p. 1227, doi. 10.23940/ijpe.19.04.p18.12271234

By:

Qian Wang;
Zhonghua Cheng;
Zhiyong Li;
Yongsheng Bai

Publication type:

Article

miR397-LACs mediated cadmium stress tolerance in Arabidopsis thaliana.

Published in:

Plant Molecular Biology, 2023, v. 113, n. 6, p. 415, doi. 10.1007/s11103-023-01369-x

By:

Ali, Shahid;
Huang, Shili;
Zhou, Jiajie;
Bai, Yongsheng;
Liu, Yang;
Shi, Liyu;
Liu, Shuai;
Hu, Zhangli;
Tang, Yulin

Publication type:

Article

Evaluation of de novo transcriptome assemblies from RNA-Seq data.

Published in:

Genome Biology, 2014, v. 15, n. 12, p. 262, doi. 10.1186/s13059-014-0553-5

By:

Bo Li;
Fillmore, Nathanael;
Yongsheng Bai;
Collins, Mike;
Thomson, James A.;
Stewart, Ron;
Dewey, Colin N.

Publication type:

Article

Novel Bioinformatics Method for Identification of Genome-Wide Non-Canonical Spliced Regions Using RNA-Seq Data.

Published in:

PLoS ONE, 2014, v. 9, n. 7, p. 1, doi. 10.1371/journal.pone.0100864

By:

Bai, Yongsheng;
Hassler, Justin;
Ziyar, Ahdad;
Li, Philip;
Wright, Zachary;
Menon, Rajasree;
Omenn, Gilbert S.;
Cavalcoli, James D.;
Kaufman, Randal J.;
Sartor, Maureen A.

Publication type:

Article

Therapeutic efficacy of Schistosoma japonicum cystatin on sepsis-induced cardiomyopathy in a mouse model.

Published in:

Parasites & Vectors, 2020, v. 13, n. 1, p. 1, doi. 10.1186/s13071-020-04104-3

By:

Gao, Shifang;
Li, Huihui;
Xie, Hong;
Wu, Shili;
Yuan, Yuan;
Chu, Liang;
Sun, Siying;
Yang, Huijuan;
Wu, Lingqin;
Bai, Yongsheng;
Zhou, Qiao;
Wang, Xin;
Zhan, Bin;
Cui, Hu;
Yang, Xiaodi

Publication type:

Article

Opportunistic Maintenance Strategy for Complex Equipment with a Genetic Algorithm Considering Failure Dependence: A Two-Dimensional Warranty Perspective.

Published in:

Sensors (14248220), 2022, v. 22, n. 18, p. 6801, doi. 10.3390/s22186801

By:

Dong, Enzhi;
Gao, Tielu;
Cheng, Zhonghua;
Wang, Rongcai;
Bai, Yongsheng

Publication type:

Article

Bridge vibration measurements using different camera placements and techniques of computer vision and deep learning.

Published in:

Advances in Bridge Engineering, 2023, v. 4, n. 1, p. 1, doi. 10.1186/s43251-023-00105-1

By:

Bai, Yongsheng;
Sezen, Halil;
Yilmaz, Alper;
Qin, Rongjun

Publication type:

Article

SARS-COV-2 as potential microRNA sponge in COVID-19 patients.

Published in:

BMC Medical Genomics, 2022, v. 15, n. 2, p. 1, doi. 10.1186/s12920-022-01243-7

By:

Li, Chang;
Wang, Rebecca;
Wu, Aurora;
Yuan, Tina;
Song, Kevin;
Bai, Yongsheng;
Liu, Xiaoming

Publication type:

Article

Inhibition of Src phosphorylation reduces damage to the blood-brain barrier following transient focal cerebral ischemia in rats.

Published in:

International Journal of Molecular Medicine, 2014, v. 34, n. 6, p. 1473, doi. 10.3892/ijmm.2014.1946

By:

YONGSHENG BAI;
GUANGHUI XU;
MENGXUE XU;
QI LI;
XINYUE QIN

Publication type:

Article

Cost Optimization of Two-dimensional Warranty under Incomplete Preventive Maintenance Condition.

Published in:

Engineering Letters, 2020, v. 28, n. 2, p. 510

By:

Zhonghua Cheng;
Qian Wang;
Yongsheng Bai;
Xing Song

Publication type:

Article

Overexpressing CrePAPS Polyadenylate Activity Enhances Protein Translation and Accumulation in Chlamydomonas reinhardtii.

Published in:

Marine Drugs, 2022, v. 20, n. 5, p. 276, doi. 10.3390/md20050276

By:

Wang, Quan;
Zhuang, Jieyi;
Ni, Shuai;
Luo, Haolin;
Zheng, Kaijie;
Li, Xinyi;
Lan, Chengxiang;
Zhao, Di;
Bai, Yongsheng;
Jia, Bin;
Hu, Zhangli

Publication type:

Article

Whole blood transcriptional profiling comparison between different milk yield of Chinese Holstein cows using RNA-seq data.

Published in:

BMC Genomics, 2016, v. 17, p. 173, doi. 10.1186/s12864-016-2901-1

By:

Xue Bai;
Zhuqing Zheng;
Bin Liu;
Xiaoyang Ji;
Yongsheng Bai;
Wenguang Zhang

Publication type:

Article

Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.

Published in:

BMC Genomics, 2016, v. 17, p. 107, doi. 10.1186/s12864-016-2896-7

By:

Yongsheng Bai;
Kinne, Jeff;
Donham, Brandon;
Feng Jiang;
Lizhong Ding;
Hassler, Justin R.;
Kaufman, Randal J.

Publication type:

Article

The IRE1α/XBP1s Pathway Is Essential for the Glucose Response and Protection of β Cells.

Published in:

PLoS Biology, 2015, v. 13, n. 10, p. 1, doi. 10.1371/journal.pbio.1002277

By:

Hassler, Justin R.;
Scheuner, Donalyn L.;
Wang, Shiyu;
Han, Jaeseok;
Kodali, Vamsi K.;
Li, Philip;
Nguyen, Julie;
George, Jenny S.;
Davis, Cory;
Wu, Shengyang P.;
Bai, Yongsheng;
Sartor, Maureen;
Cavalcoli, James;
Malhi, Harmeet;
Baudouin, Gregory;
Zhang, Yaoyang;
Yates III, John R.;
Itkin-Ansari, Pamela;
Volkmann, Niels;
Kaufman, Randal J.

Publication type:

Article

dbMTS: A comprehensive database of putative human microRNA target site SNVs and their functional predictions.

Published in:

Human Mutation, 2020, v. 41, n. 6, p. 1123, doi. 10.1002/humu.24020

By:

Li, Chang;
Mou, Chengcheng;
Swartz, Michael D.;
Yu, Bing;
Bai, Yongsheng;
Tu, Yicheng;
Liu, Xiaoming

Publication type:

Article

Detection of Flexible Pavement Surface Cracks in Coastal Regions Using Deep Learning and 2D/3D Images.

Published in:

Sensors (14248220), 2025, v. 25, n. 4, p. 1145, doi. 10.3390/s25041145

By:

Sanchez, Carlos;
Wang, Feng;
Bai, Yongsheng;
Gong, Haitao

Publication type:

Article

Proceedings of the 2019 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Published in:

BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-03580-9

By:

Wren, Jonathan D.;
Bai, Yongsheng;
Qin, Zhaohui S.;
Yan, Da;
Homayouni, Ramin

Publication type:

Article

MMiRNA-Viewer2, a bioinformatics tool for visualizing functional annotation for MiRNA and MRNA pairs in a network.

Published in:

BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-3436-7

By:

Bai, Yongsheng;
Baker, Steve;
Exoo, Kevin;
Dai, Xingqin;
Ding, Lizhong;
Khattak, Naureen Aslam;
Li, Hongtao;
Liu, Hannah;
Liu, Xiaoming

Publication type:

Article

Evolutionary origin of regulatory regions of retrogenes in Drosophila.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-241

By:

Yongsheng Bai;
Casola, Claudio;
Betrán, Esther

Publication type:

Article