Works by Bahrami, Abolfazl

Results: 32

RETRACTED: Identification of novel candidate targets for suppressing ovarian cancer progression through IL-33/ST2 axis components using the system biology approach.

Published in:

Frontiers in Molecular Biosciences, 2025, p. 1, doi. 10.3389/fmolb.2023.1189527

By:

Reivan Ortiz, Geovanny Genaro;
Ciongradi, Carmen Iulia;
Chaitanya, M. V. N. L.;
Narayanan, Jayasankar;
Mohany, Mohamed;
Al-Rejaie, Salim S.;
Arias-Gonzáles, José Luis;
Sârbu, Ioan;
Assefi, Marjan;
Akram, Shaik Vaseem;
Döğüş, Yusuf;
Bahrami, Abolfazl;
Akhavan-Sigari, Reza

Publication type:

Article

Discovery of common molecular signatures and drug repurposing for COVID-19/Asthma comorbidity: ACE2 and multi-partite networks.

Published in:

Cell Cycle, 2024, v. 23, n. 4, p. 405, doi. 10.1080/15384101.2024.2340859

By:

Xu, Jiajun;
Abdulsalam Khaleel, Raghad;
Zaidan, Haider Kamil;
Faisal Mutee, Ahmed;
Fahmi Fawy, Khaled;
Gehlot, Anita;
Abbas, Alaa Hashim;
Arias Gonzáles, José Luis;
Amin, Ali H;
Ruiz-Balvin, Maribel Carmen;
Imannezhad, Shima;
Bahrami, Abolfazl;
Akhavan-Sigari, Reza

Publication type:

Article

Designing Effective Multi-Target Drugs and Identifying Biomarkers in Recurrent Pregnancy Loss (RPL) Using In Vivo, In Vitro, and In Silico Approaches.

Published in:

Biomedicines, 2023, v. 11, n. 3, p. 879, doi. 10.3390/biomedicines11030879

By:

Ramírez-Coronel, Andrés Alexis;
Rostami, Amirabbas;
Younus, Laith A.;
Arias Gonzáles, José Luis;
Lafta, Methaq Hadi;
Amin, Ali H.;
Saadoon, Mohammed Abdulkadhim;
Salman, Hayder Mahmood;
Bahrami, Abolfazl;
Feilei, Rossa;
Akhavan-Sigari, Reza

Publication type:

Article

Author Correction: Integrated analysis of inflammatory mRNAs, miRNAs, and lncRNAs elucidates the molecular interactome behind bovine mastitis.

Published in:

2024

By:

Hasankhani, Aliakbar;
Bakherad, Maryam;
Bahrami, Abolfazl;
Shahrbabak, Hossein Moradi;
Pecho, Renzon Daniel Cosme;
Shahrbabak, Mohammad Moradi

Publication type:

Correction Notice

Corrigendum: Omics multi-layers networks provide novel mechanistic and functional insights into fat storage and lipid metabolism in poultry.

Published in:

2025

By:

Ghafouri, Farzad;
Bahrami, Abolfazl;
Sadeghi, Mostafa;
Miraei-Ashtiani, Seyed Reza;
Bakherad, Maryam;
Barkema, Herman W.;
Larose, Samantha

Publication type:

Correction Notice

Omics Multi-Layers Networks Provide Novel Mechanistic and Functional Insights Into Fat Storage and Lipid Metabolism in Poultry.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2021.646297

By:

Ghafouri, Farzad;
Bahrami, Abolfazl;
Sadeghi, Mostafa;
Miraei-Ashtiani, Seyed Reza;
Bakherad, Maryam;
Barkema, Herman W.;
Larose, Samantha

Publication type:

Article

Corrigendum: Integrated network analysis to identify key modules and potential hub genes involved in bovine respiratory disease: a systems biology approach.

Published in:

2025

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Sheybani, Negin;
Fatehi, Farhang;
Abadeh, Roxana;
Ghaem Maghami Farahani, Hamid;
Bahreini Behzadi, Mohammad Reza;
Javanmard, Ghazaleh;
Isapour, Sadegh;
Khadem, Hosein;
Barkema, Herman W.

Publication type:

Correction Notice

Integrated Network Analysis to Identify Key Modules and Potential Hub Genes Involved in Bovine Respiratory Disease: A Systems Biology Approach.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2021.753839

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Sheybani, Negin;
Fatehi, Farhang;
Abadeh, Roxana;
Ghaem Maghami Farahani, Hamid;
Bahreini Behzadi, Mohammad Reza;
Javanmard, Ghazaleh;
Isapour, Sadegh;
Khadem, Hosein;
Barkema, Herman W.

Publication type:

Article

Corrigendum: Construction of a circRNA–lincRNA–lncRNA–miRNA–mRNA ceRNA regulatory network identifies genes and pathways linked to goat fertility.

Published in:

2025

By:

Ghafouri, Farzad;
Sadeghi, Mostafa;
Bahrami, Abolfazl;
Naserkheil, Masoumeh;
Dehghanian Reyhan, Vahid;
Javanmard, Arash;
Miraei-Ashtiani, Seyed Reza;
Ghahremani, Soheila;
Barkema, Herman W.;
Abdollahi-Arpanahi, Rostam;
Kastelic, John P.

Publication type:

Correction Notice

Construction of a circRNA– lincRNA–lncRNA–miRNA–mRNA ceRNA regulatory network identifies genes and pathways linked to goat fertility.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2023.1195480

By:

Ghafouri, Farzad;
Sadeghi, Mostafa;
Bahrami, Abolfazl;
Naserkheil, Masoumeh;
Dehghanian Reyhan, Vahid;
Javanmard, Arash;
Miraei-Ashtiani, Seyed Reza;
Ghahremani, Soheila;
Barkema, Herman W.;
Abdollahi-Arpanahi, Rostam;
Kastelic, John P.

Publication type:

Article

Omics Multi-Layers Networks Provide Novel Mechanistic and Functional Insights Into Fat Storage and Lipid Metabolism in Poultry.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2021.646297

By:

Ghafouri, Farzad;
Bahrami, Abolfazl;
Sadeghi, Mostafa;
Miraei-Ashtiani, Seyed Reza;
Bakherad, Maryam;
Barkema, Herman W.;
Larose, Samantha

Publication type:

Article

شناسایی ژن‌های مؤثر بر میزان چربی محوطۀ بطنی جوجه‏‌‏های گوشتی با استفاده از داده‌های ‏ریزآرایه و توالی‌یابی ‏RNA.

Published in:

Iranian Journal of Animal Science (IJAS), 2020, v. 50, n. 4, p. 259, doi. 10.22059/ijas.2019.281245.653703

By:

Ghafouri, Farzad;
Sadeghi, Mostafa;
Bahrami, Abolfazl;
Miraei-Ashtiani, Seyed Reza

Publication type:

Article

lncRNA–miRNA–mRNA ceRNA Network Involved in Sheep Prolificacy: An Integrated Approach.

Published in:

Genes, 2022, v. 13, n. 8, p. 1295, doi. 10.3390/genes13081295

By:

Sadeghi, Masoumeh;
Bahrami, Abolfazl;
Hasankhani, Aliakbar;
Kioumarsi, Hamed;
Nouralizadeh, Reza;
Abdulkareem, Sarah Ali;
Ghafouri, Farzad;
Barkema, Herman W.

Publication type:

Article

Haplotype C of growth hormone ( GH) gene in Japanese Black cattle: Structure of GH protein and a novel method for detection of the gene.

Published in:

Animal Science Journal, 2013, v. 84, n. 12, p. 802, doi. 10.1111/asj.12132

By:

Bahrami, Abolfazl;
Ardiyanti, Astrid;
Tonosaki, Kaoru;
Suzuki, Keiichi;
Tanida, Nanako;
Hirayama, Takuji;
Roh, Sang‐Gun;
Nishio, Takeshi;
Katoh, Kazuo

Publication type:

Article

Integrated Network Analysis to Identify Key Modules and Potential Hub Genes Involved in Bovine Respiratory Disease: A Systems Biology Approach.

Published in:

Frontiers in Genetics, 2021, v. 12, p. 1, doi. 10.3389/fgene.2021.753839

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Sheybani, Negin;
Fatehi, Farhang;
Abadeh, Roxana;
Ghaem Maghami Farahani, Hamid;
Bahreini Behzadi, Mohammad Reza;
Javanmard, Ghazaleh;
Isapour, Sadegh;
Khadem, Hosein;
Barkema, Herman W.

Publication type:

Article

Omics Multi-Layers Networks Provide Novel Mechanistic and Functional Insights Into Fat Storage and Lipid Metabolism in Poultry.

Published in:

Frontiers in Genetics, 2021, v. 12, p. 1, doi. 10.3389/fgene.2021.646297

By:

Ghafouri, Farzad;
Bahrami, Abolfazl;
Sadeghi, Mostafa;
Miraei-Ashtiani, Seyed Reza;
Bakherad, Maryam;
Barkema, Herman W.;
Larose, Samantha

Publication type:

Article

Construction of a circRNA-lincRNA-lncRNA-miRNA-mRNA ceRNA regulatory network identifies genes and pathways linked to goat fertility.

Published in:

Frontiers in Genetics, 2023, p. 1, doi. 10.3389/fgene.2023.1195480

By:

Ghafouri, Farzad;
Sadeghi, Mostafa;
Bahrami, Abolfazl;
Naserkheil, Masoumeh;
Reyhan, Vahid Dehghanian;
Javanmard, Arash;
Miraei-Ashtiani, Seyed Reza;
Ghahremani, Soheila;
Barkema, Herman W.;
Abdollahi-Arpanahi, Rostam;
Kastelic, John P.

Publication type:

Article

Identify Biomarkers and Design Effective Multi-Target Drugs in Ovarian Cancer: Hit Network-Target Sets Model Optimizing.

Published in:

Biology (2079-7737), 2022, v. 11, n. 12, p. 1851, doi. 10.3390/biology11121851

By:

Esmaeilzadeh, Amir Abbas;
Kashian, Mahdis;
Salman, Hayder Mahmood;
Alsaffar, Marwa Fadhil;
Jaber, Mustafa Musa;
Soltani, Siamak;
Amiri Manjili, Danial;
Ilhan, Ahmet;
Bahrami, Abolfazl;
Kastelic, John W.

Publication type:

Article

Corrigendum: Differential co-expression network analysis reveals key hub-high traffic genes as potential therapeutic targets for COVID-19 pandemic.

Published in:

2025

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Sheybani, Negin;
Aria, Behzad;
Hemati, Behzad;
Fatehi, Farhang;
Ghaem Maghami Farahani, Hamid;
Javanmard, Ghazaleh;
Rezaee, Mahsa;
Kastelic, John P.;
Barkema, Herman W.

Publication type:

Correction Notice

Differential Co-Expression Network Analysis Reveals Key Hub-High Traffic Genes as Potential Therapeutic Targets for COVID-19 Pandemic.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2021.789317

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Sheybani, Negin;
Aria, Behzad;
Hemati, Behzad;
Fatehi, Farhang;
Ghaem Maghami Farahani, Hamid;
Javanmard, Ghazaleh;
Rezaee, Mahsa;
Kastelic, John P.;
Barkema, Herman W.

Publication type:

Article

The role of peroxisome proliferator-activated receptors in the modulation of hyperinflammation induced by SARS-CoV-2 infection: A perspective for COVID-19 therapy.

Published in:

Frontiers in Immunology, 2024, p. 01, doi. 10.3389/fimmu.2023.1127358

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Tavakoli-Far, Bahareh;
Iranshahi, Setare;
Ghaemi, Farnaz;
Akbarizadeh, Majid Reza;
Amin, Ali H.;
Kiasari, Bahman Abedi;
Shabestari, Alireza Mohammadzadeh

Publication type:

Article

A Mendelian Randomization Analysis Investigates Causal Associations between Inflammatory Bowel Diseases and Variable Risk Factors.

Published in:

Nutrients, 2023, v. 15, n. 5, p. 1202, doi. 10.3390/nu15051202

By:

Saadh, Mohamed J.;
Pal, Rashmi Saxena;
Arias-Gonzáles, José Luis;
Orosco Gavilán, Juan Carlos;
JC, Darshan;
Mohany, Mohamed;
Al-Rejaie, Salim S.;
Bahrami, Abolfazl;
Kadham, Mustafa Jawad;
Amin, Ali H.;
Georgia, Hrosti

Publication type:

Article

Association of Polyunsaturated Fatty Acid Intake on Inflammatory Gene Expression and Multiple Sclerosis: A Systematic Review and Meta-Analysis.

Published in:

Nutrients, 2022, v. 14, n. 21, p. 4627, doi. 10.3390/nu14214627

By:

Ghasemi Darestani, Nadia;
Bahrami, Abolfazl;
Mozafarian, Mohammad Reza;
Esmalian Afyouni, Nazgol;
Akhavanfar, Roozbeh;
Abouali, Reza;
Moradian, Arsalan;
Lorase, Saman

Publication type:

Article

PSSP: Protein splice site prediction algorithm using Bayesian approach.

Published in:

Journal of Bioinformatics & Computational Biology, 2019, v. 17, n. 6, p. N.PAG, doi. 10.1142/S0219720019500343

By:

Bahrami, Abolfazl;
Najafi, Ali;
Hashemi, Mohammadreza;
Miraie-Ashtiani, Seyed Reza

Publication type:

Article

Integrated analysis of inflammatory mRNAs, miRNAs, and lncRNAs elucidates the molecular interactome behind bovine mastitis.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-41116-2

By:

Hasankhani, Aliakbar;
Bakherad, Maryam;
Bahrami, Abolfazl;
Shahrbabak, Hossein Moradi;
Pecho, Renzon Daniel Cosme;
Shahrbabak, Mohammad Moradi

Publication type:

Article

Integrated analysis of inflammatory mRNAs, miRNAs, and lncRNAs elucidates the molecular interactome behind bovine mastitis.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-41116-2

By:

Hasankhani, Aliakbar;
Bakherad, Maryam;
Bahrami, Abolfazl;
Shahrbabak, Hossein Moradi;
Pecho, Renzon Daniel Cosme;
Shahrbabak, Mohammad Moradi

Publication type:

Article

RETRACTED: In-depth systems biological evaluation of bovine alveolar macrophages suggests novel insights into molecular mechanisms underlying Mycobacterium bovis infection.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2022.1041314

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Mackie, Shayan;
Maghsoodi, Sairan;
Alawamleh, Heba Saed Kariem;
Sheybani, Negin;
Safarpoor Dehkordi, Farhad;
Rajabi, Fatemeh;
Javanmard, Ghazaleh;
Khadem, Hosein;
Barkema, Herman W.;
De Donato, Marcos

Publication type:

Article

Integrating Single-Step GWAS and Bipartite Networks Reconstruction Provides Novel Insights into Yearling Weight and Carcass Traits in Hanwoo Beef Cattle.

Published in:

Animals (2076-2615), 2020, v. 10, n. 10, p. 1836, doi. 10.3390/ani10101836

By:

Naserkheil, Masoumeh;
Bahrami, Abolfazl;
Lee, Deukhwan;
Mehrban, Hossein

Publication type:

Article

Dynamic modeling of folliculogenesis signaling pathways in the presence of miRNAs expression.

Published in:

Journal of Ovarian Research, 2017, v. 10, p. 1, doi. 10.1186/s13048-017-0371-y

By:

Bahrami, Abolfazl;
Miraie-Ashtiani, Seyed Reza;
Sadeghi, Mostafa;
Najafi, Ali;
Ranjbar, Reza

Publication type:

Article

In-depth systems biological evaluation of bovine alveolar macrophages suggests novel insights into molecular mechanisms underlying Mycobacterium bovis infection.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1041314

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Mackie, Shayan;
Maghsoodi, Sairan;
Alawamleh, Heba Saed Kariem;
Sheybani, Negin;
Dehkordi, Farhad Safarpoor;
Rajabi, Fatemeh;
Javanmard, Ghazaleh;
Khadem, Hosein;
Barkema, Herman W.;
De Donato, Marcos

Publication type:

Article

Correction: Sadeghi et al. lncRNA–miRNA–mRNA ceRNA Network Involved in Sheep Prolificacy: An Integrated Approach. Genes 2022, 13 , 1295.

Published in:

2025

By:

Sadeghi, Masoumeh;
Bahrami, Abolfazl;
Hasankhani, Aliakbar;
Kioumarsi, Hamed;
Nouralizadeh, Reza;
Abdulkareem, Sarah Ali;
Ghafouri, Farzad;
Barkema, Herman W.

Publication type:

Correction Notice

Differential Co-Expression Network Analysis Reveals Key Hub-High Traffic Genes as Potential Therapeutic Targets for COVID-19 Pandemic.

Published in:

Frontiers in Immunology, 2021, v. 12, p. 1, doi. 10.3389/fimmu.2021.789317

By:

Hasankhani, Aliakbar;
Bahrami, Abolfazl;
Sheybani, Negin;
Aria, Behzad;
Hemati, Behzad;
Fatehi, Farhang;
Ghaem Maghami Farahani, Hamid;
Javanmard, Ghazaleh;
Rezaee, Mahsa;
Kastelic, John P.;
Barkema, Herman W.

Publication type:

Article