Found: 109
Select item for more details and to access through your institution.
WatFinder: a ProDy tool for protein–water interactions.
- Published in:
- Bioinformatics, 2024, v. 40, n. 8, p. 1, doi. 10.1093/bioinformatics/btae516
- By:
- Publication type:
- Article
<it>i</it>GNM: a database of protein functional motions based on Gaussian Network Model.
- Published in:
- Bioinformatics, 2005, v. 21, n. 13, p. 2978, doi. 10.1093/bioinformatics/bti469
- By:
- Publication type:
- Article
Mining frequent patterns in protein structures: a study of protease families.
- Published in:
- Bioinformatics, 2004, v. 20, n. suppl_1, p. i77, doi. 10.1093/bioinformatics/bth912
- By:
- Publication type:
- Article
Mining frequent patterns in protein structures: a study of protease families.
- Published in:
- Bioinformatics, 2004, v. 20, p. i77, doi. 10.1093/bioinformatics/bth912
- By:
- Publication type:
- Article
The center for causal discovery of biomedical knowledge from big data.
- Published in:
- 2015
- By:
- Publication type:
- journal article
Significance of p53 dynamics in regulating apoptosis in response to ionizing radiation, and polypharmacological strategies.
- Published in:
- Scientific Reports, 2014, p. 1, doi. 10.1038/srep06245
- By:
- Publication type:
- Article
Multisystem Inflammatory Syndrome in Children and Long COVID: The SARS-CoV-2 Viral Superantigen Hypothesis.
- Published in:
- Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.941009
- By:
- Publication type:
- Article
An analog of glibenclamide selectively enhances autophagic degradation of misfolded α1-antitrypsin Z.
- Published in:
- PLoS ONE, 2019, v. 14, n. 1, p. 1, doi. 10.1371/journal.pone.0209748
- By:
- Publication type:
- Article
Location Bias in cAMP Signaling and its effects on Parathyroid Hormone Receptor Biological Effectiveness.
- Published in:
- FASEB Journal, 2021, v. 35, p. N.PAG, doi. 10.1096/fasebj.2021.35.S1.03870
- By:
- Publication type:
- Article
Precision druggability of a class B GPCR, the PTH type 1 receptor.
- Published in:
- FASEB Journal, 2021, v. 35, p. N.PAG, doi. 10.1096/fasebj.2021.35.S1.03186
- By:
- Publication type:
- Article
Shared Signature Dynamics Tempered by Local Fluctuations Enables Fold Adaptability and Specificity.
- Published in:
- Molecular Biology & Evolution, 2019, v. 36, n. 9, p. 2053, doi. 10.1093/molbev/msz102
- By:
- Publication type:
- Article
Sequence Evolution Correlates with Structural Dynamics.
- Published in:
- Molecular Biology & Evolution, 2012, v. 29, n. 9, p. 2253, doi. 10.1093/molbev/mss097
- By:
- Publication type:
- Article
A genome-wide RNAi screen identifies potential drug targets in a C. elegans model of α1-antitrypsin deficiency.
- Published in:
- Human Molecular Genetics, 2014, v. 23, n. 19, p. 5123, doi. 10.1093/hmg/ddu236
- By:
- Publication type:
- Article
Interplay between arginine methylation and ubiquitylation regulates KLF4-mediated genome stability and carcinogenesis.
- Published in:
- Nature Communications, 2015, v. 6, n. 9, p. 8419, doi. 10.1038/ncomms9419
- By:
- Publication type:
- Article
Insights into the modulation of dopamine transporter function by amphetamine, orphenadrine, and cocaine binding.
- Published in:
- Frontiers in Neurology, 2015, v. 6, p. 1, doi. 10.3389/fneur.2015.00134
- By:
- Publication type:
- Article
Spatial bias in cAMP generation determines biological responses to PTH type 1 receptor activation.
- Published in:
- Science Signaling, 2021, v. 14, n. 703, p. 1, doi. 10.1126/scisignal.abc5944
- By:
- Publication type:
- Article
HiDeF: identifying persistent structures in multiscale 'omics data.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-020-02228-4
- By:
- Publication type:
- Article
Structural Dynamics Predominantly Determine the Adaptability of Proteins to Amino Acid Deletions.
- Published in:
- International Journal of Molecular Sciences, 2023, v. 24, n. 9, p. 8450, doi. 10.3390/ijms24098450
- By:
- Publication type:
- Article
NO ● Represses the Oxygenation of Arachidonoyl PE by 15LOX/PEBP1: Mechanism and Role in Ferroptosis.
- Published in:
- International Journal of Molecular Sciences, 2021, v. 22, n. 10, p. 5253, doi. 10.3390/ijms22105253
- By:
- Publication type:
- Article
Mechanisms of Action of Autophagy Modulators Dissected by Quantitative Systems Pharmacology Analysis.
- Published in:
- International Journal of Molecular Sciences, 2020, v. 21, n. 8, p. 0, doi. 10.3390/ijms21082855
- By:
- Publication type:
- Article
An Introduction to Simulation and Visualization of Biological Systems at Multiple Scales: A Summer Training Program for Interdisciplinary Research.
- Published in:
- Biotechnology Progress, 2006, v. 22, n. 1, p. 179, doi. 10.1021/bp0501773
- By:
- Publication type:
- Article
Elastic network modeling of cellular networks unveils sensor and effector genes that control information flow.
- Published in:
- PLoS Computational Biology, 2022, v. 18, n. 5, p. 1, doi. 10.1371/journal.pcbi.1010181
- By:
- Publication type:
- Article
Local relaxation of polymers in dense media: Cooperative kinematics theory and applications.
- Published in:
- Macromolecular Theory & Simulations, 1997, v. 6, n. 5, p. 881, doi. 10.1002/mats.1997.040060502
- By:
- Publication type:
- Article
Computer simulations of two-dimensional trifunctional bimodal networks.
- Published in:
- Macromolecular Theory & Simulations, 1994, v. 3, n. 1, p. 151, doi. 10.1002/mats.1994.040030112
- By:
- Publication type:
- Article
Computing the transition state populations in simple protein models.
- Published in:
- Biopolymers, 2003, v. 68, n. 1, p. 35, doi. 10.1002/bip.10280
- By:
- Publication type:
- Article
Psychomotor impairments and therapeutic implications revealed by a mutation associated with infantile Parkinsonism-Dystonia.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.68039
- By:
- Publication type:
- Article
New insight into the significance of KLF4 PARylation in genome stability, carcinogenesis, and therapy.
- Published in:
- EMBO Molecular Medicine, 2020, v. 12, n. 12, p. 1, doi. 10.15252/emmm.202012391
- By:
- Publication type:
- Article
Pharmmaker: Pharmacophore modeling and hit identification based on druggability simulations.
- Published in:
- Protein Science: A Publication of the Protein Society, 2020, v. 29, n. 1, p. 76, doi. 10.1002/pro.3732
- By:
- Publication type:
- Article
The interface of protein structure, protein biophysics, and molecular evolution.
- Published in:
- Protein Science: A Publication of the Protein Society, 2012, v. 21, n. 6, p. 769, doi. 10.1002/pro.2071
- By:
- Publication type:
- Article
Pre-existing soft modes of motion uniquely defined by native contact topology facilitate ligand binding to proteins.
- Published in:
- Protein Science: A Publication of the Protein Society, 2011, v. 20, n. 10, p. 1645, doi. 10.1002/pro.711
- By:
- Publication type:
- Article
Fast-folding protein kinetics, hidden intermediates, and the sequential stabilization model.
- Published in:
- Protein Science: A Publication of the Protein Society, 2002, v. 11, n. 8, p. 1958, doi. 10.1110/ps.0207102
- By:
- Publication type:
- Article
Identification of kinetically hot residues in proteins.
- Published in:
- Protein Science: A Publication of the Protein Society, 1998, v. 7, n. 12, p. 2522, doi. 10.1002/pro.5560071205
- By:
- Publication type:
- Article
Hydroxamic Acids as PARP‐1 Inhibitors: Molecular Design and Anticancer Activity of Novel Phenanthridinones.
- Published in:
- Helvetica Chimica Acta, 2023, v. 106, n. 10, p. 1, doi. 10.1002/hlca.202300133
- By:
- Publication type:
- Article
Quantitative Systems Pharmacological Analysis of Drugs of Abuse Reveals the Pleiotropy of Their Targets and the Effector Role of mTORC1.
- Published in:
- Frontiers in Pharmacology, 2019, p. N.PAG, doi. 10.3389/fphar.2019.00191
- By:
- Publication type:
- Article
Strikingly High Activity of 15‐Lipoxygenase Towards Di‐Polyunsaturated Arachidonoyl/Adrenoyl‐Phosphatidylethanolamines Generates Peroxidation Signals of Ferroptotic Cell Death.
- Published in:
- Angewandte Chemie International Edition, 2024, v. 63, n. 9, p. 1, doi. 10.1002/anie.202314710
- By:
- Publication type:
- Article
Complete Mapping of Substrate Translocation Highlights the Role of LeuT N-terminal Segment in Regulating Transport Cycle.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 10, p. 1, doi. 10.1371/journal.pcbi.1003879
- By:
- Publication type:
- Article
ATPase Subdomain IA Is a Mediator of Interdomain Allostery in Hsp70 Molecular Chaperones.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 5, p. 1, doi. 10.1371/journal.pcbi.1003624
- By:
- Publication type:
- Article
Exploring the Conformational Transitions of Biomolecular Systems Using a Simple Two-State Anisotropic Network Model.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 4, p. 1, doi. 10.1371/journal.pcbi.1003521
- By:
- Publication type:
- Article
Coupling between Catalytic Loop Motions and Enzyme Global Dynamics.
- Published in:
- PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002705
- By:
- Publication type:
- Article
Changes in Dynamics upon Oligomerization Regulate Substrate Binding and Allostery in Amino Acid Kinase Family Members.
- Published in:
- PLoS Computational Biology, 2011, v. 7, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002201
- By:
- Publication type:
- Article
Role of Hsp70 ATPase Domain Intrinsic Dynamics and Sequence Evolution in Enabling its Functional Interactions with NEFs.
- Published in:
- PLoS Computational Biology, 2010, v. 6, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000931
- By:
- Publication type:
- Article
Using Entropy Maximization to Understand the Determinants of Structural Dynamics beyond Native Contact Topology.
- Published in:
- PLoS Computational Biology, 2010, v. 6, n. 6, p. 1, doi. 10.1371/journal.pcbi.1000816
- By:
- Publication type:
- Article
On the Conservation of the Slow Conformational Dynamics within the Amino Acid Kinase Family: NAGK the Paradigm.
- Published in:
- PLoS Computational Biology, 2010, v. 6, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000738
- By:
- Publication type:
- Article
Global Motions of the Nuclear Pore Complex: Insights from Elastic Network Models.
- Published in:
- PLoS Computational Biology, 2009, v. 5, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000496
- By:
- Publication type:
- Article
Allosteric Transitions of Supramolecular Systems Explored by Network Models: Application to Chaperonin GroEL.
- Published in:
- PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000360
- By:
- Publication type:
- Article
Correction: Signal Propagation in Proteins and Relation to Equilibrium Fluctuations.
- Published in:
- 2007
- By:
- Publication type:
- Correction notice
Signal Propagation in Proteins and Relation to Equilibrium Fluctuations.
- Published in:
- PLoS Computational Biology, 2007, v. 3, n. 9, p. 1716, doi. 10.1371/journal.pcbi.0030172
- By:
- Publication type:
- Article
ClustENMD: efficient sampling of biomolecular conformational space at atomic resolution.
- Published in:
- Bioinformatics, 2021, v. 37, n. 21, p. 3956, doi. 10.1093/bioinformatics/btab496
- By:
- Publication type:
- Article
ProDy 2.0: increased scale and scope after 10 years of protein dynamics modelling with Python.
- Published in:
- Bioinformatics, 2021, v. 37, n. 20, p. 3657, doi. 10.1093/bioinformatics/btab187
- By:
- Publication type:
- Article
QuartataWeb: Integrated Chemical–Protein-Pathway Mapping for Polypharmacology and Chemogenomics.
- Published in:
- Bioinformatics, 2020, v. 36, n. 12, p. 3935, doi. 10.1093/bioinformatics/btaa210
- By:
- Publication type:
- Article