Works by Baca, Sylvan

Results: 14

Qualifiers of atypia in the cytologic diagnosis of thyroid nodules are associated with different Afirma gene expression classifier results and clinical outcomes.
Published in:
2017
By:
- Baca, Sylvan C.;
- Wong, Kristine S.;
- Strickland, Kyle C.;
- Heller, Howard T.;
- Kim, Matthew I.;
- Barletta, Justine A.;
- Cibas, Edmund S.;
- Krane, Jeffrey F.;
- Marqusee, Ellen;
- Angell, Trevor E.
Publication type:
journal article
Integrative molecular analyses define correlates of high B7-H3 expression in metastatic castrate-resistant prostate cancer.
Published in:
NPJ Precision Oncology, 2022, v. 6, n. 1, p. 1, doi. 10.1038/s41698-022-00323-2
By:
- Shi, Xiaolei;
- Day, Abderrahman;
- Bergom, Hannah E.;
- Tape, Sydney;
- Baca, Sylvan C.;
- Sychev, Zoi E.;
- Larson, Gabrianne;
- Bozicevich, Asha;
- Drake, Justin M.;
- Zorko, Nicholas;
- Wang, Jinhua;
- Ryan, Charles J.;
- Antonarakis, Emmanuel S.;
- Hwang, Justin
Publication type:
Article
CREB5 reprograms FOXA1 nuclear interactions to promote resistance to androgen receptor-targeting therapies.
Published in:
eLife, 2022, p. 1, doi. 10.7554/eLife.73223
By:
- Hwang, Justin H.;
- Arafeh, Rand;
- Ji-Heui Seo;
- Baca, Sylvan C.;
- Ludwig, Megan;
- Arnoff, Taylor E.;
- Sawyer, Lydia;
- Richter, Camden;
- Tape, Sydney;
- Bergom, Hannah E.;
- McSweeney, Sean;
- Rennhack, Jonathan P.;
- Klingenberg, Sarah A.;
- Cheung, Alexander T. M.;
- Kwon, Jason;
- So, Jonathan;
- Kregel, Steven;
- Van Allen, Eliezer M.;
- Drake, Justin M.;
- Freedman, Matthew L.
Publication type:
Article
ASCL1 activates neuronal stem cell-like lineage programming through remodeling of the chromatin landscape in prostate cancer.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29963-5
By:
- Nouruzi, Shaghayegh;
- Ganguli, Dwaipayan;
- Tabrizian, Nakisa;
- Kobelev, Maxim;
- Sivak, Olena;
- Namekawa, Takeshi;
- Thaper, Daksh;
- Baca, Sylvan C.;
- Freedman, Matthew L.;
- Aguda, Adeleke;
- Davies, Alastair;
- Zoubeidi, Amina
Publication type:
Article
Subtype heterogeneity and epigenetic convergence in neuroendocrine prostate cancer.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26042-z
By:
- Cejas, Paloma;
- Xie, Yingtian;
- Font-Tello, Alba;
- Lim, Klothilda;
- Syamala, Sudeepa;
- Qiu, Xintao;
- Tewari, Alok K.;
- Shah, Neel;
- Nguyen, Holly M.;
- Patel, Radhika A.;
- Brown, Lisha;
- Coleman, Ilsa;
- Hackeng, Wenzel M.;
- Brosens, Lodewijk;
- Dreijerink, Koen M. A.;
- Ellis, Leigh;
- Alaiwi, Sarah Abou;
- Seo, Ji-Heui;
- Baca, Sylvan;
- Beltran, Himisha
Publication type:
Article
A biallelic multiple nucleotide length polymorphism explains functional causality at 5p15.33 prostate cancer risk locus.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40616-z
By:
- Spisak, Sandor;
- Tisza, Viktoria;
- Nuzzo, Pier Vitale;
- Seo, Ji-Heui;
- Pataki, Balint;
- Ribli, Dezso;
- Sztupinszki, Zsofia;
- Bell, Connor;
- Rohanizadegan, Mersedeh;
- Stillman, David R.;
- Alaiwi, Sarah Abou;
- Bartels, Alan B.;
- Papp, Marton;
- Shetty, Anamay;
- Abbasi, Forough;
- Lin, Xianzhi;
- Lawrenson, Kate;
- Gayther, Simon A.;
- Pomerantz, Mark;
- Baca, Sylvan
Publication type:
Article
Epigenomic charting and functional annotation of risk loci in renal cell carcinoma.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-35833-5
By:
- Nassar, Amin H.;
- Abou Alaiwi, Sarah;
- Baca, Sylvan C.;
- Adib, Elio;
- Corona, Rosario I.;
- Seo, Ji-Heui;
- Fonseca, Marcos A. S.;
- Spisak, Sandor;
- El Zarif, Talal;
- Tisza, Viktoria;
- Braun, David A.;
- Du, Heng;
- He, Monica;
- Flaifel, Abdallah;
- Alchoueiry, Michel;
- Denize, Thomas;
- Matar, Sayed G.;
- Acosta, Andres;
- Shukla, Sachet;
- Hou, Yue
Publication type:
Article
Extensive androgen receptor enhancer heterogeneity in primary prostate cancers underlies transcriptional diversity and metastatic potential.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-35135-2
By:
- Kneppers, Jeroen;
- Severson, Tesa M.;
- Siefert, Joseph C.;
- Schol, Pieter;
- Joosten, Stacey E. P.;
- Yu, Ivan Pak Lok;
- Huang, Chia-Chi Flora;
- Morova, Tunç;
- Altıntaş, Umut Berkay;
- Giambartolomei, Claudia;
- Seo, Ji-Heui;
- Baca, Sylvan C.;
- Carneiro, Isa;
- Emberly, Eldon;
- Pasaniuc, Bogdan;
- Jerónimo, Carmen;
- Henrique, Rui;
- Freedman, Matthew L.;
- Wessels, Lodewyk F. A.;
- Lack, Nathan A.
Publication type:
Article
Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer.
Published in:
Nature Genetics, 2012, v. 44, n. 6, p. 685, doi. 10.1038/ng.2279
By:
- Barbieri, Christopher E;
- Baca, Sylvan C;
- Lawrence, Michael S;
- Demichelis, Francesca;
- Blattner, Mirjam;
- Theurillat, Jean-Philippe;
- White, Thomas A;
- Stojanov, Petar;
- Van Allen, Eliezer;
- Stransky, Nicolas;
- Nickerson, Elizabeth;
- Chae, Sung-Suk;
- Boysen, Gunther;
- Auclair, Daniel;
- Onofrio, Robert C;
- Park, Kyung;
- Kitabayashi, Naoki;
- MacDonald, Theresa Y;
- Sheikh, Karen;
- Vuong, Terry
Publication type:
Article
Liquid biopsy in renal cell carcinoma.
Published in:
Oncologist, 2024, v. 29, n. 10, p. 821, doi. 10.1093/oncolo/oyae230
By:
- Machaalani, Marc;
- Eid, Marc;
- Semaan, Karl;
- Chehade, Razane El Hajj;
- Nawfal, Rashad;
- Baca, Sylvan C;
- Choueiri, Toni K
Publication type:
Article
Optimized high-throughput screening of non-coding variants identified from genome-wide association studies.
Published in:
Nucleic Acids Research, 2023, v. 51, n. 3, p. e18, doi. 10.1093/nar/gkac1198
By:
- Morova, Tunc;
- Ding, Yi;
- Huang, Chia-Chi F;
- Sar, Funda;
- Schwarz, Tommer;
- Giambartolomei, Claudia;
- Baca, Sylvan C;
- Grishin, Dennis;
- Hach, Faraz;
- Gusev, Alexander;
- Freedman, Matthew L;
- Pasaniuc, Bogdan;
- Lack, Nathan A
Publication type:
Article
The genomic landscape of prostate cancer.
Published in:
Frontiers in Endocrinology, 2012, p. 1, doi. 10.3389/fendo.2012.00069
By:
- Baca, Sylvan C.;
- Garraway, Levi A.;
- Priolo, Carmen;
- Lenzi, Andrea;
- Mosca, Alessandra
Publication type:
Article
Unraveling the clonal hierarchy of somatic genomic aberrations.
Published in:
Genome Biology, 2014, v. 15, n. 8, p. 1, doi. 10.1186/s13059-014-0439-6
By:
- Prandi, Davide;
- Baca, Sylvan C.;
- Romanel, Alessandro;
- Barbieri, Christopher E.;
- Mosquera, Juan Miguel;
- Fontugne, Jacqueline;
- Beltran, Himisha;
- Sboner, Andrea;
- Garraway, Levi A.;
- Rubin, Mark A.;
- Demichelis, Francesca
Publication type:
Article
Reprogramming of the FOXA1 cistrome in treatment-emergent neuroendocrine prostate cancer.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22139-7
By:
- Baca, Sylvan C.;
- Takeda, David Y.;
- Seo, Ji-Heui;
- Hwang, Justin;
- Ku, Sheng Yu;
- Arafeh, Rand;
- Arnoff, Taylor;
- Agarwal, Supreet;
- Bell, Connor;
- O'Connor, Edward;
- Qiu, Xintao;
- Alaiwi, Sarah Abou;
- Corona, Rosario I.;
- Fonseca, Marcos A. S.;
- Giambartolomei, Claudia;
- Cejas, Paloma;
- Lim, Klothilda;
- He, Monica;
- Sheahan, Anjali;
- Nassar, Amin
Publication type:
Article