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Biomimetic Approach for Highly Selective Artificial Water Channels Based on Tubular Pillar[5]arene Dimers.
- Published in:
- Angewandte Chemie, 2020, v. 132, n. 51, p. 23413, doi. 10.1002/ange.202009219
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- Publication type:
- Article
UNILIPID, a Methodology for Energetically Accurate Prediction of Protein Insertion into Implicit Membranes of Arbitrary Shape.
- Published in:
- Membranes, 2023, v. 13, n. 3, p. 362, doi. 10.3390/membranes13030362
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- Publication type:
- Article
A Molecular Perspective on Mitochondrial Membrane Fusion: From the Key Players to Oligomerization and Tethering of Mitofusin.
- Published in:
- 2019
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- Publication type:
- journal article
Modeling the early stage of DNA sequence recognition within RecA nucleoprotein filaments.
- Published in:
- Nucleic Acids Research, 2010, v. 38, n. 19, p. 6313, doi. 10.1093/nar/gkq459
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- Publication type:
- Article
A locally closed conformation of a bacterial pentameric proton-gated ion channel.
- Published in:
- Nature Structural & Molecular Biology, 2012, v. 19, n. 6, p. 642, doi. 10.1038/nsmb.2307
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- Publication type:
- Article
Coarse-Grain Simulations of the R-SNARE Fusion Protein in its Membrane Environment Detect Long-Lived Conformational Sub-States.
- Published in:
- ChemPhysChem, 2009, v. 10, n. 9/10, p. 1548, doi. 10.1002/cphc.200900216
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- Publication type:
- Article
GPU-powered tools boost molecular visualization.
- Published in:
- Briefings in Bioinformatics, 2011, v. 12, n. 6, p. 689, doi. 10.1093/bib/bbq089
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- Publication type:
- Article
Wielding the power of interactive molecular simulations.
- Published in:
- WIREs: Computational Molecular Science, 2022, v. 12, n. 4, p. 1, doi. 10.1002/wcms.1594
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- Publication type:
- Article
Game On, Science - How Video Game Technology May Help Biologists Tackle Visualization Challenges.
- Published in:
- PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0057990
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- Publication type:
- Article
Conformational sampling and dynamics of membrane proteins from 10-nanosecond computer simulations.
- Published in:
- Proteins, 2004, v. 57, n. 4, p. 783, doi. 10.1002/prot.20257
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- Publication type:
- Article
Understanding small biomolecule-biomaterial interactions: A review of fundamental theoretical and experimental approaches for biomolecule interactions with inorganic surfaces.
- Published in:
- Journal of Biomedical Materials Research, Part A, 2013, v. 101A, n. 4, p. 1210, doi. 10.1002/jbm.a.34416
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- Publication type:
- Article
Electrostatically-driven fast association and perdeuteration allow detection of transferred cross-relaxation for G protein-coupled receptor ligands with equilibrium dissociation constants in the high-to-low nanomolar range.
- Published in:
- Journal of Biomolecular NMR, 2011, v. 50, n. 3, p. 191, doi. 10.1007/s10858-011-9523-3
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- Publication type:
- Article
Controlling Redox Enzyme Orientation at Planar Electrodes.
- Published in:
- Catalysts (2073-4344), 2018, v. 8, n. 5, p. 192, doi. 10.3390/catal8050192
- By:
- Publication type:
- Article
State of the Art of Molecular Visualization in Immersive Virtual Environments.
- Published in:
- Computer Graphics Forum, 2023, v. 42, n. 6, p. 1, doi. 10.1111/cgf.14738
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- Publication type:
- Article
Design X Bioinformatics: a community-driven initiative to connect bioinformatics and design.
- Published in:
- Journal of Integrative Bioinformatics, 2022, v. 19, n. 2, p. 1, doi. 10.1515/jib-2022-0037
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- Publication type:
- Article
Design – a new way to look at old molecules.
- Published in:
- Journal of Integrative Bioinformatics, 2022, v. 19, n. 2, p. 1, doi. 10.1515/jib-2022-0020
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- Publication type:
- Article
Structural basis for ion permeation mechanism in pentameric ligand-gated ion channels.
- Published in:
- EMBO Journal, 2013, v. 32, n. 5, p. 728, doi. 10.1038/emboj.2013.17
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- Publication type:
- Article
X-ray structures of general anaesthetics bound to a pentameric ligand-gated ion channel.
- Published in:
- Nature, 2011, v. 469, n. 7330, p. 428, doi. 10.1038/nature09647
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- Publication type:
- Article
X-ray structure of a pentameric ligand-gated ion channel in an apparently open conformation.
- Published in:
- 2009
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- Publication type:
- Letter
MDverse, shedding light on the dark matter of molecular dynamics simulations.
- Published in:
- eLife, 2024, p. 1, doi. 10.7554/eLife.90061
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- Publication type:
- Article
Modelling lipid systems in fluid with Lattice Boltzmann Molecular Dynamics simulations and hydrodynamics.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-52760-y
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- Publication type:
- Article
Formation of Raft-Like Assemblies within Clusters of Influenza Hemagglutinin Observed by MD Simulations.
- Published in:
- PLoS Computational Biology, 2013, v. 9, n. 4, p. 1, doi. 10.1371/journal.pcbi.1003034
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- Publication type:
- Article
How Cations Can Assist DNase I in DNA Binding and Hydrolysis.
- Published in:
- PLoS Computational Biology, 2010, v. 6, n. 11, p. 1, doi. 10.1371/journal.pcbi.1001000
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- Publication type:
- Article
Combinatorial Screening of Water/Proton Permeation of Self‐Assembled Pillar[5]arene Artificial Water Channel Libraries.
- Published in:
- Angewandte Chemie, 2023, v. 135, n. 42, p. 1, doi. 10.1002/ange.202310812
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- Publication type:
- Article
Fast and Interactive Positioning of Proteins within Membranes.
- Published in:
- Algorithms, 2022, v. 15, n. 11, p. 415, doi. 10.3390/a15110415
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- Publication type:
- Article
Combinatorial Screening of Water/Proton Permeation of Self‐Assembled Pillar[5]arene Artificial Water Channel Libraries.
- Published in:
- Angewandte Chemie International Edition, 2023, v. 62, n. 42, p. 1, doi. 10.1002/anie.202310812
- By:
- Publication type:
- Article
Biomimetic Approach for Highly Selective Artificial Water Channels Based on Tubular Pillar[5]arene Dimers.
- Published in:
- Angewandte Chemie International Edition, 2020, v. 59, n. 51, p. 23213, doi. 10.1002/anie.202009219
- By:
- Publication type:
- Article
Modeling complex biological systems: From solution chemistry to membranes and channels.
- Published in:
- Pure & Applied Chemistry, 2013, v. 85, n. 1, p. 1, doi. 10.1351/PAC-CON-12-04-10
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- Publication type:
- Article
UnityMol prototype for FAIR sharing of molecular‐visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments.
- Published in:
- Acta Crystallographica: Section D, Structural Biology, 2021, v. 77, n. 6, p. 746, doi. 10.1107/S2059798321002941
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- Publication type:
- Article
Visualizing protein structures — tools and trends.
- Published in:
- Biochemical Society Transactions, 2020, v. 48, n. 2, p. 499, doi. 10.1042/BST20190621
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- Publication type:
- Article
From complex data to clear insights: visualizing molecular dynamics trajectories.
- Published in:
- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1356659
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- Publication type:
- Article
Atomic structure and dynamics of pentameric ligand-gated ion channels: new insight from bacterial homologues.
- Published in:
- Journal of Physiology, 2010, v. 588, n. 4, p. 565, doi. 10.1113/jphysiol.2009.183160
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- Publication type:
- Article
Molecular Insights into Substrate Binding of the Outer Membrane Enzyme OmpT.
- Published in:
- Catalysts (2073-4344), 2023, v. 13, n. 2, p. 214, doi. 10.3390/catal13020214
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- Publication type:
- Article
Complex molecular assemblies at hand via interactive simulations.
- Published in:
- Journal of Computational Chemistry, 2009, v. 30, n. 15, p. 2375, doi. 10.1002/jcc.21235
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- Publication type:
- Article
Three-dimensional representations of complex carbohydrates and polysaccharides-- SweetUnityMol: A video game-based computer graphic software.
- Published in:
- Glycobiology, 2015, v. 25, n. 5, p. 483, doi. 10.1093/glycob/cwu133
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- Publication type:
- Article
Analyzing protein topology based on Laguerre tessellation of a pore-traversing water network.
- Published in:
- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-31422-5
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- Publication type:
- Article
Outer membrane proteins: comparing X-ray and NMR structures by MD simulations in lipid bilayers.
- Published in:
- European Biophysics Journal, 2008, v. 37, n. 2, p. 131, doi. 10.1007/s00249-007-0185-8
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- Publication type:
- Article
Photocontrol of Protein Activity in Cultured Cells and Zebrafish with One- and Two-Photon Illumination.
- Published in:
- ChemBioChem, 2010, v. 11, n. 5, p. 653, doi. 10.1002/cbic.201000008
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- Publication type:
- Article
Epock: rapid analysis of protein pocket dynamics.
- Published in:
- 2015
- By:
- Publication type:
- Product Review
GPU-accelerated atom and dynamic bond visualization using hyperballs: A unified algorithm for balls, sticks, and hyperboloids.
- Published in:
- Journal of Computational Chemistry, 2011, v. 32, n. 13, p. 2924, doi. 10.1002/jcc.21861
- By:
- Publication type:
- Article
Visualizing biomolecular electrostatics in virtual reality with UnityMol‐APBS.
- Published in:
- Protein Science: A Publication of the Protein Society, 2020, v. 29, n. 1, p. 237, doi. 10.1002/pro.3773
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- Publication type:
- Article
Ten simple rules to create a serious game, illustrated with examples from structural biology.
- Published in:
- PLoS Computational Biology, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.pcbi.1005955
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- Publication type:
- Article