Works by BERGER, Ruud

Results: 40

Insulin-like growth factors and leucine kinetics during exercise training in children with cystic fibrosis.

Published in:

2001

By:

Gulmans, Vincent;
van der Laag, Johannes;
Wattimena, Darcos;
van Doorn, Jaap;
Oostveen, Dorothe;
Berger, Ruud;
de Meer, Kees;
Gulmans, V;
van der Laag, J;
Wattimena, D;
van Doorn, J;
Oostveen, D;
Berger, R;
de Meer, K

Publication type:

journal article

Discovery of biochemical biomarkers for aggression: A role for metabolomics in psychiatry.

Published in:

American Journal of Medical Genetics. Part B: Neuropsychiatric Genetics, 2016, v. 171B, n. 5, p. 719, doi. 10.1002/ajmg.b.32435

By:

Hagenbeek, Fiona A.;
Kluft, Cornelis;
Hankemeier, Thomas;
Bartels, Meike;
Draisma, Harmen H. M.;
Middeldorp, Christel M.;
Berger, Ruud;
Noto, Antonio;
Lussu, Milena;
Pool, René;
Fanos, Vassilios;
Boomsma, Dorret I.

Publication type:

Article

Global profiling of the muscle metabolome: method optimization, validation and application to determine exercise-induced metabolic effects.

Published in:

Metabolomics, 2015, v. 11, n. 2, p. 271, doi. 10.1007/s11306-014-0701-7

By:

Alves, Rodrigo;
Dane, Adrie;
Harms, Amy;
Strassburg, Katrin;
Seifar, Reza;
Verdijk, Lex;
Kersten, Sander;
Berger, Ruud;
Hankemeier, Thomas;
Vreeken, Rob

Publication type:

Article

Rapid metabolic screening of early zebrafish embryogenesis based on direct infusion-nanoESI-FTMS.

Published in:

Metabolomics, 2013, v. 9, n. 4, p. 864, doi. 10.1007/s11306-012-0493-6

By:

Raterink, Robert-Jan;
Kloet, Frans;
Li, Jiajie;
Wattel, Niels;
Schaaf, Marcel;
Spaink, Herman;
Berger, Ruud;
Vreeken, Robert;
Hankemeier, Thomas

Publication type:

Article

Collagen Induced Arthritis in DBA/1J Mice Associates with Oxylipin Changes in Plasma.

Published in:

Mediators of Inflammation, 2015, v. 2015, p. 1, doi. 10.1155/2015/543541

By:

He, Min;
van Wijk, Eduard;
Berger, Ruud;
Wang, Mei;
Strassburg, Katrin;
Schoeman, Johannes C.;
Vreeken, Rob J.;
van Wietmarschen, Herman;
Harms, Amy C.;
Kobayashi, Masaki;
Hankemeier, Thomas;
van der Greef, Jan

Publication type:

Article

D‐serine in the developing human central nervous system.

Published in:

Annals of Neurology, 2006, v. 60, n. 4, p. 476

By:

Sabine A. Fuchs;
Lambertus Dorland;
Monique G. De Sain‐Van Der Velden;
Margriet Hendriks;
Leo W. J. Klomp;
Ruud Berger;
Tom J. De Koning

Publication type:

Article

Beneficial effects of L-serine and glycine in the management of seizures in 3-phosphoglycerate dehydrogenase deficiency.

Published in:

1998

By:

de Koning, Tom J.;
Duran, Marinus;
Dorland, Lambertus;
Gooskens, Rob;
van Schaftingen, Emile;
Jaeken, Jaak;
Blau, Nenad;
Berger, Ruud;
Poll-The, Bwee Tien;
de Koning, T J;
Duran, M;
Dorland, L;
Gooskens, R;
Van Schaftingen, E;
Jaeken, J;
Blau, N;
Berger, R;
Poll-The, B T

Publication type:

journal article

X-linked liver glycogenosis: localization and isolation of a candidate gene.

Published in:

Human Molecular Genetics, 1993, v. 2, n. 5, p. 583

By:

Hendrickx, Jan;
Coucke, Paul;
Bossuyt, Paul;
Wauters, Jan;
Raeymaekers, Peter;
Marchau, Fabienne;
Smit, G. Peter A.;
Stolte, Irene;
Sardharwalla, I.B.;
Berthelot, Jacques;
Van den Bergh, Inge;
Berger, Ruud;
Van Broeckhoven, Christine;
Baussan, Christiane;
Wapenaar, Martin;
John, Fernandes;
Willems, Patrick J.

Publication type:

Article

Neurotransmitters in 3-phosphoglycerate dehydrogenase deficiency.

Published in:

2000

By:

de Koning, Tom J;
Duran, Marinus;
Dorland, Lambertus;
Jakobs, Cornelis;
Wevers, Ron A;
Berger, Ruud;
Poll-The, Bwee-Tien;
de Koning, T J;
Duran, M;
Dorland, L;
Jakobs, C;
Wevers, R A;
Berger, R;
Poll-The, B T

Publication type:

Case Study

Fumarylacetoacetase mutations in tyrosinaemia type I.

Published in:

Human Mutation, 1996, v. 7, n. 3, p. 239, doi. 10.1002/(SICI)1098-1004(1996)7:3<239::AID-HUMU8>3.0.CO;2-5

By:

Rootwelt, Helge;
Høie, Kari;
Berger, Ruud;
Kvittingen, Eli Anne

Publication type:

Article

Increased concentrations of both NMDA receptor co-agonists d-serine and glycine in global ischemia: a potential novel treatment target for perinatal asphyxia.

Published in:

Amino Acids, 2012, v. 43, n. 1, p. 355, doi. 10.1007/s00726-011-1086-9

By:

Fuchs, Sabine;
Peeters-Scholte, Cacha;
Barse, Martina;
Roeleveld, Martin;
Klomp, Leo;
Berger, Ruud;
Koning, Tom

Publication type:

Article

Quantification of in vivo oxidative damage in Caenorhabditis elegans during aging by endogenous F3-isoprostane measurement.

Published in:

Aging Cell, 2013, v. 12, n. 2, p. 214, doi. 10.1111/acel.12043

By:

Labuschagne, Christiaan F.;
Stigter, Edwin C. A.;
Hendriks, Margriet M. W. B.;
Berger, Ruud;
Rokach, Joshua;
Korswagen, Hendrik C.;
Brenkman, Arjan B.

Publication type:

Article

P18 is a tumor suppressor gene involved in human medullary thyroid carcinoma and pheochromocytoma development.

Published in:

International Journal of Cancer, 2009, v. 124, n. 2, p. 339, doi. 10.1002/ijc.23977

By:

van Veelen, Wendy;
Klompmaker, Rob;
Gloerich, Martijn;
van Gasteren, Carola J.R.;
Kalkhoven, Eric;
Berger, Ruud;
Lips, Cornelis J.M.;
Medema, Rene H.;
Höppener, Jo W.M.;
Acton, Dennis S.

Publication type:

Article

Early adipogenesis is regulated through USP7-mediated deubiquitination of the histone acetyltransferase TIP60.

Published in:

Nature Communications, 2013, v. 4, n. 10, p. 2656, doi. 10.1038/ncomms3656

By:

Gao, Yuan;
Koppen, Arjen;
Rakhshandehroo, Maryam;
Tasdelen, Ismayil;
van de Graaf, Stan F.;
van Loosdregt, Jorg;
van Beekum, Olivier;
Hamers, Nicole;
van Leenen, Dik;
Berkers, Celia R.;
Berger, Ruud;
Holstege, Frank C.P.;
Coffer, Paul J.;
Brenkman, Arjan B.;
Ovaa, Huib;
Kalkhoven, Eric

Publication type:

Article

Renal proximal tubular cells acquire resistance to cell death stimuli in mice with hereditary tyrosinemia type 1.

Published in:

Kidney International, 2004, v. 66, n. 3, p. 990, doi. 10.1111/j.1523-1755.2004.00788.x

By:

Luijerink, Marjanka C.;
van Beurden, Ellen A. C. M.;
Malingré, Helga E. M.;
Jacobs, Saskal M. M.;
Grompe, Markus;
Klomp, Leo W. J.;
Berger, Ruud;
van den Berg, Inge E. T.

Publication type:

Article

DIALYSIS - TRANSPLANTATION A broad-based metabolic approach to study VLDL apoB100 metabolism in patients with ESRD and patients treated with peritoneal dialysis.

Published in:

Kidney International, 2004, v. 65, n. 3, p. 1064, doi. 10.1111/j.1523-1755.2004.00466.x

By:

H.C.M.T., Prinsen, Berthil;
Rabelink, Ton J.;
Romijn, Johannes A.;
Bisschop, Peter H.;
de Barse, Martina M.J.;
de Boer, José;
van Haeften, Timon W.;
Hugh, P.;
Barrett, R.;
Berger, Ruud;
de Sain-Van Der Velden, Monique G.M.

Publication type:

Article

Increased albumin and fibrinogen synthesis rate in patients with chronic renal failure.

Published in:

Kidney International, 2003, v. 64, n. 4, p. 1495, doi. 10.1046/j.1523-1755.2003.00211.x

By:

Prinsen, Berthil H.C.M.T.;
Rabelink, Ton J.;
Beutler, Jaap J.;
Kaysen, George A.;
de Boer, Jose;
Boer, Walther H.;
Hagen, E. Christiaan;
Berger, Ruud;
de Sain-van der Velden, Monique G.M.

Publication type:

Article

Hypertriglyceridemia in patients with chronic renal failure: Possible mechanisms.

Published in:

Kidney International, 2003, v. 63, p. S121, doi. 10.1046/j.1523-1755.63.s84.34.x

By:

Prinsen, Berthil H.C.M.T.;
de Sain-van der Velden, Monique G.M.;
de Koning, Eelco J.P.;
Koomans, Hein A.;
Berger, Ruud;
Rabelink, Ton J.

Publication type:

Article

Homocysteine and methionine metabolism in ESRD: A stable isotope study.

Published in:

Kidney International, 1999, v. 56, n. 3, p. 1064, doi. 10.1046/j.1523-1755.1999.00624.x

By:

Van Guldener, Coen;
Kulik, Wim;
Berger, Ruud;
Dijkstra, Denise A.;
Jakobs, Cornelis;
Reijngoud, Dirk-Jan;
Donker, Ab J.M.;
Stehouwer, Coen D.A.;
De Meer, Kees

Publication type:

Article

Hypertriglyceridemia in patients with chronic renal failure: Possible mechanisms.

Published in:

Kidney International Supplement, 2003, n. 84, p. 121, doi. 10.1046/j.1523-1755.63.s84.34.x

By:

Prinsen, Berthil H.C.M.T.;
De Sain-Van Der Velden, Monique G.M.;
De Koning, Eelco J.P.;
Koomans, Hein A.;
Berger, Ruud;
Rabelink, Ton J.

Publication type:

Article

Metabolic characterization of the natural progression of chronic hepatitis B.

Published in:

Genome Medicine, 2016, v. 8, p. 1, doi. 10.1186/s13073-016-0318-8

By:

Schoeman, Johannes C.;
Jun Hou;
Harms, Amy C.;
Vreeken, Rob J.;
Berger, Ruud;
Hankemeier, Thomas;
Boonstra, Andre

Publication type:

Article

Assessing the metabolic effects of prednisolone in healthy volunteers using urine metabolic profiling.

Published in:

Genome Medicine, 2012, v. 4, n. 11, p. 1, doi. 10.1186/gm395

By:

Ellero-Simatos, Sandrine;
Szymańska, Ewa;
Rullmann, Ton;
Dokter, Wim HA;
Ramaker, Raymond;
Berger, Ruud;
Van Iersel, Thijs MP;
Smilde, Age K;
Hankemeier, Thomas;
Alkema, Wynand

Publication type:

Article

Role of amino acids in rheumatoid arthritis studied by metabolomics.

Published in:

International Journal of Rheumatic Diseases, 2019, v. 22, n. 1, p. 38, doi. 10.1111/1756-185X.13062

By:

He, Min;
Harms, Amy C.;
Wijk, Eduard;
Wang, Mei;
Berger, Ruud;
Koval, Slavik;
Hankemeier, Thomas;
Greef, Jan

Publication type:

Article

Fetal Metabolic Stress Disrupts Immune Homeostasis and Induces Proinflammatory Responses in Human Immunodeficiency Virus Type 1- and Combination Antiretroviral Therapy-Exposed Infants.

Published in:

2017

By:

Schoeman, Johannes C.;
Moutloatse, Gontse P.;
Harms, Amy C.;
Vreeken, Rob J.;
Scherpbier, Henriette J.;
Van Leeuwen, Liesbeth;
Kuijpers, Taco W.;
Reinecke, Carools J.;
Berger, Ruud;
Hankemeier, Thomas;
Bunders, Madeleine J.

Publication type:

journal article

Reply.

Published in:

Annals of Neurology, 2009, v. 65, n. 4, p. 484, doi. 10.1002/ana.21701

By:

Engbers, Hannelie M.;
Berger, Ruud;
van Hasselt, Peter;
de Koning, Tom;
de Sain-van der Velden, Monique G. M.;
Kroes, Hester;
Visser, Gepke

Publication type:

Article

Yield of additional metabolic studies in neurodevelopmental disorders.

Published in:

Annals of Neurology, 2008, v. 64, n. 2, p. 212, doi. 10.1002/ana.21435

By:

Engbers, Hannelie M.;
Berger, Ruud;
van Hasselt, Peter;
de Koning, Tom;
de Sain-van der Velden, Monique G. M.;
Kroes, Hester Y.;
Visser, Gepke

Publication type:

Article

Mutation analysis for prenatal diagnosis of hereditary tyrosinaemia type 1.

Published in:

Prenatal Diagnosis, 1997, v. 17, n. 10, p. 964, doi. 10.1002/(SICI)1097-0223(199710)17:10<964::AID-PD164>3.0.CO;2-6

By:

Mustonen, Aki;
Ploos Van Amstel, Hans Kristian;
Berger, Ruud;
Salo, Matti K.;
Viinikka, Lasse;
Simola, Kalle O. J.

Publication type:

Article

The serine/threonine phosphatase PPM1B (PP2Cß) selectively modulates PPARγ activity.

Published in:

Biochemical Journal, 2013, v. 451, n. 1, p. 45, doi. 10.1042/BJ20121113

By:

TASDELEN, Ismayil;
VAN BEEKUM, Olivier;
GORBENKO, Olena;
FLESKENS, Veerle;
VAN DEN BROEK, Niels J. F.;
KOPPEN, Arjen;
HAMERS, Nicole;
BERGER, Ruud;
COFFER, Paul J.;
BRENKMAN, Arjan B.;
KALKHOVEN, Eric

Publication type:

Article

Metabolomics Profiling for Identification of Novel Potential Markers in Early Prediction of Preeclampsia.

Published in:

PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0098540

By:

Kuc, Sylwia;
Koster, Maria P. H.;
Pennings, Jeroen L. A.;
Hankemeier, Thomas;
Berger, Ruud;
Harms, Amy C.;
Dane, Adrie D.;
Schielen, Peter C. J. I.;
Visser, Gerard H. A.;
Vreeken, Rob J.

Publication type:

Article

Allele Compensation in Tip60+/− Mice Rescues White Adipose Tissue Function In Vivo.

Published in:

PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0098343

By:

Gao, Yuan;
Hamers, Nicole;
Rakhshandehroo, Maryam;
Berger, Ruud;
Lough, John;
Kalkhoven, Eric

Publication type:

Article

The Copper Metabolism MURR1 Domain Protein 1 (COMMD1) Modulates the Aggregation of Misfolded Protein Species in a Client-Specific Manner.

Published in:

PLoS ONE, 2014, v. 9, n. 4, p. 1, doi. 10.1371/journal.pone.0092408

By:

Vonk, Willianne I. M.;
Kakkar, Vaishali;
Bartuzi, Paulina;
Jaarsma, Dick;
Berger, Ruud;
Hofker, Marten H.;
Klomp, Leo W. J.;
Wijmenga, Cisca;
Kampinga, Harm H.;
van de Sluis, Bart

Publication type:

Article

A Protocol for Quantifying Lipid Peroxidation in Cellular Systems by F2-Isoprostane Analysis.

Published in:

PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0080935

By:

Labuschagne, Christiaan F.;
van den Broek, Niels J. F.;
Postma, Pjotr;
Berger, Ruud;
Brenkman, Arjan B.

Publication type:

Article

PPARγ Regulates Expression of Carbohydrate Sulfotransferase 11 (CHST11/C4ST1), a Regulator of LPL Cell Surface Binding

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0064284

By:

Tasdelen, Ismayil;
Berger, Ruud;
Kalkhoven, Eric

Publication type:

Article

A Novel RNAi Lethality Rescue Screen to Identify Regulators of Adipogenesis.

Published in:

PLoS ONE, 2012, v. 7, n. 6, p. e37680, doi. 10.1371/journal.pone.0037680

By:

van Beekum, Olivier;
Yuan Gao;
Berger, Ruud;
Koppen, Arjen;
Kalkhoven, Eric

Publication type:

Article

Liver-Specific Commd1 Knockout Mice Are Susceptible to Hepatic Copper Accumulation.

Published in:

PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0029183

By:

Vonk, Willianne I. M.;
Bartuzi, Paulina;
Bie, Prim de;
Kloosterhuis, Niels;
Wichers, Catharina G. K.;
Berger, Ruud;
Haywood, Susan;
Klomp, Leo W. J.;
Wijmenga, Cisca;
Sluis, Bart van de

Publication type:

Article

Simplivariate Models: Ideas and First Examples.

Published in:

PLoS ONE, 2008, v. 3, n. 9, p. 1, doi. 10.1371/journal.pone.0003259

By:

Hageman, Jos A.;
Hendriks, Margriet M. W. B.;
Westerhuis, Johan A.;
van der Werf, Mariët J.;
Berger, Ruud;
Smilde, Age K.

Publication type:

Article

The copper-transporting capacity of ATP7A mutants associated with Menkes disease is ameliorated by COMMD1 as a result of improved protein expression.

Published in:

Cellular & Molecular Life Sciences, 2012, v. 69, n. 1, p. 149, doi. 10.1007/s00018-011-0743-1

By:

Vonk, Willianne;
Bie, Prim;
Wichers, Catharina;
den Berghe, Peter;
Plaats, Rozemarijn;
Berger, Ruud;
Wijmenga, Cisca;
Klomp, Leo;
Sluis, Bart

Publication type:

Article

Development and application of a UHPLC-MS/MS metabolomics based comprehensive systemic and tissue-specific screening method for inflammatory, oxidative and nitrosative stress.

Published in:

Analytical & Bioanalytical Chemistry, 2018, v. 410, n. 10, p. 2551, doi. 10.1007/s00216-018-0912-2

By:

Schoeman, Johannes C.;
Harms, Amy C.;
van Weeghel, Michel;
Berger, Ruud;
Vreeken, Rob J.;
Hankemeier, Thomas

Publication type:

Article

Metabolomics profiling of the free and total oxidised lipids in urine by LC-MS/MS: application in patients with rheumatoid arthritis.

Published in:

Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 23, p. 6307, doi. 10.1007/s00216-016-9742-2

By:

Fu, Junzeng;
Schoeman, Johannes;
Harms, Amy;
van Wietmarschen, Herman;
Vreeken, Rob;
Berger, Ruud;
Cuppen, Bart;
Lafeber, Floris;
van der Greef, Jan;
Hankemeier, Thomas

Publication type:

Article

Quantitative profiling of oxylipins through comprehensive LC-MS/MS analysis: application in cardiac surgery.

Published in:

Analytical & Bioanalytical Chemistry, 2012, v. 404, n. 5, p. 1413, doi. 10.1007/s00216-012-6226-x

By:

Strassburg, Katrin;
Huijbrechts, Annemarie;
Kortekaas, Kirsten;
Lindeman, Jan;
Pedersen, Theresa;
Dane, Adrie;
Berger, Ruud;
Brenkman, Arjan;
Hankemeier, Thomas;
Duynhoven, John;
Kalkhoven, Eric;
Newman, John;
Vreeken, Rob

Publication type:

Article