Works by BAKER, MARK S.

Results: 32

An optimized approach for enrichment of glycoproteins from cell culture lysates using native multi-lectin affinity chromatography.

Published in:

Journal of Separation Science, 2012, v. 35, n. 18, p. 2445, doi. 10.1002/jssc.201200049

By:

Lee, Ling Y.;
Hincapie, Marina;
Packer, Nicolle;
Baker, Mark S.;
Hancock, William S.;
Fanayan, Susan

Publication type:

Article

In-depth N-glycome profiling of paired colorectal cancer and non-tumorigenic tissues reveals cancer-, stage- and EGFR-specific protein N-glycosylation.

Published in:

Glycobiology, 2015, v. 25, n. 10, p. 1064, doi. 10.1093/glycob/cwv042

By:

Sethi, Manveen K.;
Hoguen Kim;
Cheol Keun Park;
Baker, Mark S.;
Young-Ki Paik;
Packer, Nicolle H.;
Hancock, William S.;
Fanayan, Susan;
Thaysen-Andersen, Morten

Publication type:

Article

Proteomic analysis of human plasma: Failure of centrifugal ultrafiltration to remove albumin and other high molecular weight proteins.

Published in:

Proteomics, 2001, v. 1, n. 12, p. 1503, doi. 10.1002/1615-9861(200111)1:12<1503::AID-PROT1503>3.0.CO;2-M

By:

Georgiou, Harry M.;
Rice, Gregory E.;
Baker, Mark S.

Publication type:

Article

The localization of the relaxed form of plasminogen activator inhibitor type 2 in human gingival tissues.

Published in:

Histochemistry & Cell Biology, 2001, v. 116, n. 5, p. 447, doi. 10.1007/s00418-001-0341-7

By:

Lindberg, Pia;
Baker, Mark S.;
Kinnby, Bertil

Publication type:

Article

Chromosomal localization of the human urokinase plasminogen activator receptor and plasminogen activator inhibitor type-2 genes: Implications in colorectal cancer.

Published in:

Journal of Gastroenterology & Hepatology, 1994, v. 9, n. 4, p. 340, doi. 10.1111/j.1440-1746.1994.tb01252.x

By:

WEBB, GRAHAM;
BAKER, MARK S.;
NICHOLL, JILLIAN;
WANG, YAO;
WOODROW, GRAEME;
KRUITHOF, EGBERT;
DOE, WILLIAM F.

Publication type:

Article

17β-estradiol Changes the Human Cerebral Endothelial Cell Proteome Upon Exposure to Cyclic Stretch.

Published in:

Malaysian Journal of Health Sciences / Jurnal Sains Kesihatan Malaysia, 2018, v. 16, p. 55, doi. 10.17576/JSKM-2018-09

By:

JUFRI, NURUL FARHANA;
MOHAMEDALI, ABIDALI;
SEONG BEOM AHN;
AVOLIO, ALBERTO;
BAKER, MARK S.

Publication type:

Article

17β-estradiol Changes the Human Cerebral Endothelial Cell Proteome Upon Exposure to Cyclic Stretch.

Published in:

Malaysian Journal of Health Sciences / Jurnal Sains Kesihatan Malaysia, 2018, v. 16, n. 2, p. 55, doi. 10.17576/JSKM-2018-09

By:

JUFRI, NURUL FARHANA;
MOHAMEDALI, ABIDALI;
AHN, SEONG BEOM;
AVOLIO, ALBERTO;
BAKER, MARK S.

Publication type:

Article

Proteomics Reveals Cell‐Surface Urokinase Plasminogen Activator Receptor Expression Impacts Most Hallmarks of Cancer.

Published in:

Proteomics, 2019, v. 19, n. 21/22, p. N.PAG, doi. 10.1002/pmic.201900026

By:

Ahn, Seong Beom;
Mohamedali, Abidali;
Pascovici, Dana;
Adhikari, Subash;
Sharma, Samridhi;
Nice, Edouard C.;
Baker, Mark S.

Publication type:

Article

Recent Workshops of the HUPO Human Plasma Proteome Project (HPPP): A bridge with the HUPO CardioVascular Initiative and the emergence of SRM targeted proteomics.

Published in:

Proteomics, 2011, v. 11, n. 17, p. 3439, doi. 10.1002/pmic.201100382

By:

Omenn, Gilbert S.;
Baker, Mark S.;
Aebersold, Ruedi

Publication type:

Article

The Asia Oceania Human Proteome Organisation Membrane Proteomics Initiative. Preparation and characterisation of the carbonate-washed membrane standard.

Published in:

Proteomics, 2010, v. 10, n. 22, p. 4142, doi. 10.1002/pmic.201000126

By:

Peng, Lifeng;
Kapp, Eugene A.;
Fenyö, David;
Kwon, Min-Seok;
Jiang, Pu;
Wu, Songfeng;
Jiang, Ying;
Aguilar, Marie-Isabel;
Ahmed, Nikhat;
Baker, Mark S.;
Cai, Zongwei;
Chen, Yu-Ju;
Van Chi, Phan;
Chung, Maxey C. M.;
He, Fuchu;
Len, Alice C. L.;
Liao, Pao-Chi;
Nakamura, Kazuyuki;
Ngai, Sai Ming;
Paik, Young-Ki

Publication type:

Article

Mass spectrometry–based protein identification in proteomics—a review.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 2, p. 1620, doi. 10.1093/bib/bbz163

By:

Noor, Zainab;
Ahn, Seong Beom;
Baker, Mark S;
Ranganathan, Shoba;
Mohamedali, Abidali

Publication type:

Article

Potential early clinical stage colorectal cancer diagnosis using a proteomics blood test panel.

Published in:

Clinical Proteomics, 2019, v. 16, n. 1, p. N.PAG, doi. 10.1186/s12014-019-9255-z

By:

Ahn, Seong Beom;
Sharma, Samridhi;
Mohamedali, Abidali;
Mahboob, Sadia;
Redmond, William J.;
Pascovici, Dana;
Wu, Jemma X.;
Zaw, Thiri;
Adhikari, Subash;
Vaibhav, Vineet;
Nice, Edouard C.;
Baker, Mark S.

Publication type:

Article

Proteomics and the microbiome: pitfalls and potential.

Published in:

Expert Review of Proteomics, 2019, v. 16, n. 6, p. 501, doi. 10.1080/14789450.2018.1523724

By:

Lin, Huafeng;
He, Qing-Yu;
Shi, Lei;
Sleeman, Mark;
Baker, Mark S.;
Nice, Edouard C.

Publication type:

Article

Pathology, proteomics and the pathway to personalised medicine.

Published in:

Expert Review of Proteomics, 2018, v. 15, n. 3, p. 231, doi. 10.1080/14789450.2018.1425618

By:

Jin, Ping;
Lan, Jiang;
Wang, Kui;
Baker, Mark S.;
Huang, Canhua;
Nice, Edouard C.

Publication type:

Article

iSwathX: an interactive web-based application for extension of DIA peptide reference libraries.

Published in:

Bioinformatics, 2019, v. 35, n. 3, p. 538, doi. 10.1093/bioinformatics/bty660

By:

Noor, Zainab;
Mohamedali, Abidali;
Ranganathan, Shoba;
Wu, Jemma X;
Pascovici, Dana;
Molloy, Mark P;
Baker, Mark S

Publication type:

Article

Serpins in the Human Hair Follicle.

Published in:

Journal of Investigative Dermatology, 2000, v. 114, n. 5, p. 917, doi. 10.1046/j.1523-1747.2000.00945.x

By:

Jensen, Pamela J.;
Yang, Tien;
Yu, Da-Wen;
Baker, Mark S.;
Risse, Barbara;
Sun, Tung-Tien;
Lavker, Robert M.

Publication type:

Article

Localization of Plasminogen Activator Inhibitor Type 2 (PAI-2) in Hair and Nail: Implications ...

Published in:

Journal of Investigative Dermatology, 1998, v. 110, n. 6, p. 917, doi. 10.1046/j.1523-1747.1998.00223.x

By:

Lavker, Robert M.;
Risse, Barbara;
Brown, Heather;
Ginsburg, David;
Pearson, Julia;
Baker, Mark S.;
Jensen, Pamela J.

Publication type:

Article

Recent findings from the human proteome project: opening the mass spectrometry toolbox to advance cancer diagnosis, surveillance and treatment.

Published in:

Expert Review of Proteomics, 2015, v. 12, n. 3, p. 279, doi. 10.1586/14789450.2015.1040770

By:

Cantor, David I;
Nice, Edouard C;
Baker, Mark S

Publication type:

Article

Accelerating the search for the missing proteins in the human proteome.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 14271, doi. 10.1038/ncomms14271

By:

Baker, Mark S.;
Ahn, Seong Beom;
Mohamedali, Abidali;
Islam, Mohammad T.;
Cantor, David;
Verhaert, Peter D.;
Fanayan, Susan;
Sharma, Samridhi;
Nice, Edouard C.;
Connor, Mark;
Ranganathan, Shoba

Publication type:

Article

Direct integrin αvβ6-ERK binding: implications for tumour growth.

Published in:

Oncogene, 2002, v. 21, n. 9, p. 1370, doi. 10.1038/sj.onc.1205286

By:

Ahmed, Nuzhat;
Jun Niu;
Dorahy, Douglas J.;
Xinhua Gu;
Andrews, Sarah;
Meldrum, Cliff J.;
Scott, Rodney J.;
Baker, Mark S.;
Macreadie, Ian G.;
Agrez, Michael V.

Publication type:

Article

A Proteomic Examination of Plasma Extracellular Vesicles Across Colorectal Cancer Stages Uncovers Biological Insights That Potentially Improve Prognosis.

Published in:

Cancers, 2024, v. 16, n. 24, p. 4259, doi. 10.3390/cancers16244259

By:

Mohamedali, Abidali;
Heng, Benjamin;
Amirkhani, Ardeshir;
Krishnamurthy, Shivani;
Cantor, David;
Lee, Peter Jun Myung;
Shin, Joo-Shik;
Solomon, Michael;
Guillemin, Gilles J.;
Baker, Mark S.;
Ahn, Seong Beom

Publication type:

Article

High-abundance protein depletion: Comparison of methods for human plasma biomarker discovery.

Published in:

Electrophoresis, 2010, v. 31, n. 3, p. 471, doi. 10.1002/elps.200900286

By:

Polaskova, Veronika;
Kapur, Amit;
Khan, Alamgir;
Molloy, Mark P.;
Baker, Mark S.

Publication type:

Article

A Transferrin Triggered Pathway for Highly Targeted Delivery of Graphene‐Based Nanodrugs to Treat Choroidal Melanoma.

Published in:

Advanced Healthcare Materials, 2018, v. 7, n. 16, p. 1, doi. 10.1002/adhm.201800377

By:

Zhao, Bingxin;
Dong, Kalun;
Lin, Mimi;
Dong, Gongxian;
Shan, Suyan;
Lawson, Tom;
Yan, Lu;
Zhang, Wenjing;
Shi, Bingyang;
Chou, Shulei;
Baker, Mark S.;
Liu, Yong

Publication type:

Article

High-abundance protein depletion: Comparison of methods for human plasma biomarker discovery.

Published in:

Proteomics - Clinical Applications, 2010, v. 4, n. 8/9, p. 774, doi. 10.1002/prca.201090054

By:

Polaskova, Veronika;
Kapur, Amit;
Khan, Alamgir;
Molloy, Mark P.;
Baker, Mark S.

Publication type:

Article

The development of multiple reaction monitoring assays for liver-derived plasma proteins.

Published in:

Proteomics - Clinical Applications, 2007, v. 1, n. 12, p. 1570, doi. 10.1002/prca.200700305

By:

McKay, Matthew J.;
Sherman, Jamie;
Laver, Matthew T.;
Baker, Mark S.;
Clarke, Stephen J.;
Molloy, Mark P.

Publication type:

Article

Epithelial and Stromal Cell Urokinase Plasminogen Activator Receptor Expression Differentially Correlates with Survival in Rectal Cancer Stages B and C Patients.

Published in:

PLoS ONE, 2015, v. 10, n. 2, p. 1, doi. 10.1371/journal.pone.0117786

By:

Ahn, Seong Beom;
Chan, Charles;
Dent, Owen F.;
Mohamedali, Abidali;
Kwun, Sun Young;
Clarke, Candice;
Fletcher, Julie;
Chapuis, Pierre H.;
Nice, Edouard C.;
Baker, Mark S.

Publication type:

Article

Correlations between Integrin ανβ6 Expression and Clinico-Pathological Features in Stage B and Stage C Rectal Cancer.

Published in:

PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0097248

By:

Ahn, Seong Beom;
Mohamedali, Abidali;
Chan, Charles;
Fletcher, Julie;
Kwun, Sun Young;
Clarke, Candice;
Dent, Owen F.;
Chapuis, Pierre H.;
Nice, Edouard;
Baker, Mark S.

Publication type:

Article

Mutation analysis of CDP, TP53, and KRAS in uterine leiomyomas.

Published in:

Molecular Carcinogenesis, 2003, v. 37, n. 2, p. 61, doi. 10.1002/mc.10127

By:

Maria I. Patrikis;
Emma J. Bryan;
Nicola A. Thomas;
Greg E. Rice;
Michael A. Quinn;
Mark S. Baker

Publication type:

Article

The Low-Abundance Plasma Proteome Reveals Differentially Abundant Proteins Associated with Breast Implant Capsular Contracture: A Pilot Study.

Published in:

Proteomes, 2024, v. 12, n. 3, p. 22, doi. 10.3390/proteomes12030022

By:

Rahman, Md. Arifur;
Amirkhani, Ardeshir;
Mempin, Maria;
Ahn, Seong Beom;
Deva, Anand K.;
Baker, Mark S.;
Vickery, Karen;
Hu, Honghua

Publication type:

Article

Evidence for intracellular cleavage of plasminogen activator inhibitor type 2 (PAI-2) in normal epidermal keratinocytes.

Published in:

Journal of Cellular Physiology, 2000, v. 182, n. 2, p. 281, doi. 10.1002/(SICI)1097-4652(200002)182:2<281::AID-JCP17>3.0.CO;2-D

By:

Risse, Barbara C.;
Chung, Nancy M.;
Baker, Mark S.;
Jensen, Pamela J.

Publication type:

Article

Recombinant Protein Spectral Library (rPSL) DIA-MS method improves identification and quantification of low-abundance cancer-associated and kynurenine pathway proteins.

Published in:

Communications Chemistry, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42004-025-01531-0

By:

Krishnamurthy, Shivani;
Gunasegaran, Bavani;
Paul-Heng, Moumita;
Mohamedali, Abidali;
P. Klare, William;
Pang, C. N. Ignatius;
Gluch, Laurence;
Shin, Joo-Shik;
Chan, Charles;
Baker, Mark S.;
Ahn, Seong Beom;
Heng, Benjamin

Publication type:

Article

Elevated plasminogen receptor expression occurs as a degradative phase event in cellular apoptosis.

Published in:

Immunology & Cell Biology, 1999, v. 77, n. 3, p. 249, doi. 10.1046/j.1440-1711.1999.00823.x

By:

O’Mullane, Matthew J;
Baker, Mark S

Publication type:

Article