Works by Arner, Erik

Results: 43
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    The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

    Published in:
    Nature Genetics, 2009, v. 41, n. 5, p. 553, doi. 10.1038/ng.375
    By:
    • Suzuki, Harukazu;
    • Forrest, Alistair R R;
    • van Nimwegen, Erik;
    • Daub, Carsten O;
    • Balwierz, Piotr J;
    • Irvine, Katharine M;
    • Lassmann, Timo;
    • Ravasi, Timothy;
    • Hasegawa, Yuki;
    • de Hoon, Michiel J L;
    • Katayama, Shintaro;
    • Schroder, Kate;
    • Carninci, Piero;
    • Tomaru, Yasuhiro;
    • Kanamori-Katayama, Mutsumi;
    • Kubosaki, Atsutaka;
    • Akalin, Altuna;
    • Ando, Yoshinari;
    • Arner, Erik;
    • Asada, Maki
    Publication type:
    Article
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    Identification of novel cerebellar developmental transcriptional regulators with motif activity analysis.

    Published in:
    BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6063-9
    By:
    • Ha, Thomas J.;
    • Zhang, Peter G. Y.;
    • Robert, Remi;
    • Yeung, Joanna;
    • Swanson, Douglas J.;
    • Mathelier, Anthony;
    • Wasserman, Wyeth W.;
    • Im, Sujin;
    • Itoh, Masayoshi;
    • Kawaji, Hideya;
    • Lassmann, Timo;
    • Daub, Carsten O.;
    • Arner, Erik;
    • Carninci, Piero;
    • Hayashizaki, Yoshihide;
    • Forrest, Alistair R. R.;
    • Goldowitz, Daniel
    Publication type:
    Article
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    Discovery of Transcription Factors Novel to Mouse Cerebellar Granule Cell Development Through Laser-Capture Microdissection.

    Published in:
    Cerebellum, 2018, v. 17, n. 3, p. 308, doi. 10.1007/s12311-017-0912-3
    By:
    • Zhang, Peter G. Y.;
    • Yeung, Joanna;
    • Gupta, Ishita;
    • Ramirez, Miguel;
    • Ha, Thomas;
    • Swanson, Douglas J.;
    • Nagao-Sato, Sayaka;
    • Itoh, Masayoshi;
    • Kawaji, Hideya;
    • Lassmann, Timo;
    • Daub, Carsten O.;
    • Arner, Erik;
    • de Hoon, Michiel;
    • the FANTOM consortium;
    • Carninci, Piero;
    • Forrest, Alistair R. R.;
    • Hayashizaki, Yoshihide;
    • Goldowitz, Dan
    Publication type:
    Article
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    Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease.

    Published in:
    PLoS Genetics, 2017, v. 13, n. 3, p. 1, doi. 10.1371/journal.pgen.1006641
    By:
    • Baillie, J. Kenneth;
    • Arner, Erik;
    • Daub, Carsten;
    • De Hoon, Michiel;
    • Itoh, Masayoshi;
    • Kawaji, Hideya;
    • Lassmann, Timo;
    • Carninci, Piero;
    • Forrest, Alistair R. R.;
    • Hayashizaki, Yoshihide;
    • null, null;
    • Faulkner, Geoffrey J.;
    • Wells, Christine A.;
    • Rehli, Michael;
    • Pavli, Paul;
    • Summers, Kim M.;
    • Hume, David A.
    Publication type:
    Article
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    Systematic analysis of transcription start sites in avian development.

    Published in:
    PLoS Biology, 2017, v. 15, n. 9, p. 1, doi. 10.1371/journal.pbio.2002887
    By:
    • Lizio, Marina;
    • Deviatiiarov, Ruslan;
    • Nagai, Hiroki;
    • Galan, Laura;
    • Arner, Erik;
    • Itoh, Masayoshi;
    • Lassmann, Timo;
    • Kasukawa, Takeya;
    • Hasegawa, Akira;
    • Ros, Marian A.;
    • Hayashizaki, Yoshihide;
    • Carninci, Piero;
    • Forrest, Alistair R. R.;
    • Kawaji, Hideya;
    • Gusev, Oleg;
    • Sheng, Guojun
    Publication type:
    Article
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    Heritability and polygenic load for comorbid anxiety and depression.

    Published in:
    Translational Psychiatry, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41398-025-03325-3
    By:
    • Tabrizi, Fara;
    • Rosén, Jörgen;
    • Grönvall, Hampus;
    • William-Olsson, Victor Rahimzadeh;
    • Arner, Erik;
    • Magnusson, Patrik KE;
    • Palm, Camilla;
    • Larsson, Henrik;
    • Viktorin, Alexander;
    • Bernhardsson, Jens;
    • Björkdahl, Johanna;
    • Jansson, Billy;
    • Sundin, Örjan;
    • Zhou, Xuan;
    • Speed, Doug;
    • Åhs, Fredrik
    Publication type:
    Article
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    Changes in Subcutaneous Fat Cell Volume and Insulin Sensitivity After Weight Loss.

    Published in:
    Diabetes Care, 2014, v. 37, n. 7, p. 1831, doi. 10.2337/dc13-2395
    By:
    • Andersson, Daniel P.;
    • Hogling, Daniel Eriksson;
    • Thorell, Anders;
    • Toft, Eva;
    • Qvisth, Veronica;
    • Näslund, Erik;
    • Thörne, Anders;
    • Wirén, Mikael;
    • Löfgren, Patrik;
    • Hoffstedt, Johan;
    • Dahlman, Ingrid;
    • Mejhert, Niklas;
    • Rydén, Mikael;
    • Arner, Erik;
    • Arner, Peter
    Publication type:
    Article
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    Dynamics of fat cell turnover in humans.

    Published in:
    2008
    By:
    • Spalding, Kirsty L.;
    • Arner, Erik;
    • Westermark, Pål O.;
    • Bernard, Samuel;
    • Buchholz, Bruce A.;
    • Bergmann, Olaf;
    • Blomqvist, Lennart;
    • Hoffstedt, Johan;
    • Näslund, Erik;
    • Britton, Tom;
    • Concha, Hernan;
    • Hassan, Moustapha;
    • Rydén, Mikael;
    • Frisén, Jonas;
    • Arner, Peter
    Publication type:
    Letter
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    Correcting errors in shotgun sequences.

    Published in:
    Nucleic Acids Research, 2003, v. 31, n. 15, p. 4663, doi. 10.1093/nar/gkg653;
    By:
    • Tammi, Martti T.;
    • Arner, Erik;
    • Kindlund, Ellen;
    • Andersson, Björn
    Publication type:
    Article
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    Gateways to the FANTOM5 promoter level mammalian expression atlas.

    Published in:
    Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-014-0560-6
    By:
    • Lizio, Marina;
    • Harshbarger, Jayson;
    • Hisashi Shimoji;
    • Severin, Jessica;
    • Takeya Kasukawa;
    • Sahin, Serkan;
    • Abugessaisa, Imad;
    • Shiro Fukuda;
    • Fumi Hori;
    • Sachi Ishikawa-Kato;
    • Mungall, Christopher J.;
    • Arner, Erik;
    • Baillie, J. Kenneth;
    • Bertin, Nicolas;
    • Hidemasa Bono;
    • de Hoon, Michiel;
    • Diehl, Alexander D.;
    • Dimont, Emmanuel;
    • Freeman, Tom C.;
    • Kaori Fujieda
    Publication type:
    Article
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    Transcriptional Dynamics During Human Adipogenesis and Its Link to Adipose Morphology and Distribution.

    Published in:
    Diabetes, 2017, v. 66, n. 1, p. 218, doi. 10.2337/db16-0631
    By:
    • Ehrlund, Anna;
    • Mejhert, Niklas;
    • Björk, Christel;
    • Andersson, Robin;
    • Kulyté, Agné;
    • Åström, Gaby;
    • Masayoshi Itoh;
    • Hideya Kawaji;
    • Lassmann, Timo;
    • Daub, Carsten O.;
    • Carninci, Piero;
    • Forrest, Alistair R.R.;
    • Yoshihide Hayashizaki;
    • Sandelin, Albin;
    • Ingelsson, Erik;
    • Rydén, Mikael;
    • Laurencikiene, Jurga;
    • Arner, Peter;
    • Arner, Erik
    Publication type:
    Article
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    Adipose Tissue MicroRNAs as Regulators of CCL2 Production in Human Obesity.

    Published in:
    Diabetes, 2012, v. 61, n. 8, p. 1986, doi. 10.2337/db11-1508
    By:
    • Arner, Erik;
    • Mejhert, Niklas;
    • Kulyté, Agné;
    • Balwierz, Piotr J.;
    • Pachkov, Mikhail;
    • Cormont, Mireille;
    • Lorente-Cebrián, Silvia;
    • Ehrlund, Anna;
    • Laurencikiene, Jurga;
    • Hedén, Per;
    • Dahlman-Wright, Karin;
    • Tanti, Jean-François;
    • Hayashizaki, Yoshihide;
    • Rydén, Mikael;
    • Dahlman, Ingrid;
    • van Nimwegen, Erik;
    • Daub, Carsten O.;
    • Arner, Peter
    Publication type:
    Article
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    Adipocyte lipases and defect of lipolysis in human obesity.

    Published in:
    2005
    By:
    • Langin, Dominique;
    • Dicker, Andrea;
    • Tavernier, Geneviève;
    • Hoffstedt, Johan;
    • Mairal, Aline;
    • Rydén, Mikael;
    • Arner, Erik;
    • Sicard, Audrey;
    • Jenkins, Christopher M.;
    • Viguerie, Nathalie;
    • Harmelen, Vanessa van;
    • Gross, Richard W.;
    • Holm, Cecilia;
    • Arner, Peter;
    • Tavernier, Geneviève;
    • Rydén, Mikael;
    • van Harmelen, Vanessa
    Publication type:
    journal article
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    An atlas of active enhancers across human cell types and tissues.

    Published in:
    Nature, 2014, v. 507, n. 7493, p. 455, doi. 10.1038/nature12787
    By:
    • Andersson, Robin;
    • Gebhard, Claudia;
    • Miguel-Escalada, Irene;
    • Hoof, Ilka;
    • Bornholdt, Jette;
    • Boyd, Mette;
    • Chen, Yun;
    • Zhao, Xiaobei;
    • Schmidl, Christian;
    • Suzuki, Takahiro;
    • Ntini, Evgenia;
    • Arner, Erik;
    • Valen, Eivind;
    • Li, Kang;
    • Schwarzfischer, Lucia;
    • Glatz, Dagmar;
    • Raithel, Johanna;
    • Lilje, Berit;
    • Rapin, Nicolas;
    • Bagger, Frederik Otzen
    Publication type:
    Article
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    Dynamics of human adipose lipid turnover in health and metabolic disease.

    Published in:
    Nature, 2011, v. 478, n. 7367, p. 110, doi. 10.1038/nature10426
    By:
    • Arner, Peter;
    • Bernard, Samuel;
    • Salehpour, Mehran;
    • Possnert, Göran;
    • Liebl, Jakob;
    • Steier, Peter;
    • Buchholz, Bruce A.;
    • Eriksson, Mats;
    • Arner, Erik;
    • Hauner, Hans;
    • Skurk, Thomas;
    • Rydén, Mikael;
    • Frayn, Keith N.;
    • Spalding, Kirsty L.
    Publication type:
    Article
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    Functional annotation of the vlinc class of non-coding RNAs using systems biology approach.

    Published in:
    Nucleic Acids Research, 2016, v. 44, n. 7, p. 3233, doi. 10.1093/nar/gkw162
    By:
    • Laurent, Georges St.;
    • Vyatkin, Yuri;
    • Antonets, Denis;
    • Ri, Maxim;
    • Yao Qi;
    • Saik, Olga;
    • Shtokalo, Dmitry;
    • de Hoon, Michiel J. L.;
    • Hideya Kawaji;
    • Masayoshi Itoh;
    • Lassmann, Timo;
    • Arner, Erik;
    • Forrest, Alistair R. R.;
    • Nicolas, Estelle;
    • McCaffrey, Timothy A.;
    • Carninci, Piero;
    • Yoshihide Hayashizaki;
    • Wahlestedt, Claes;
    • Kapranov, Philipp
    Publication type:
    Article
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    Redefining the transcriptional regulatory dynamics of classically and alternatively activated macrophages by deepCAGE transcriptomics.

    Published in:
    Nucleic Acids Research, 2015, v. 43, n. 14, p. 6969, doi. 10.1093/nar/gkv646
    By:
    • Roy, Sugata;
    • Schmeier, Sebastian;
    • Arner, Erik;
    • Alam, Tanvir;
    • Parihar, Suraj P.;
    • Ozturk, Mumin;
    • Tamgue, Ousman;
    • Hideya Kawaji;
    • de Hoon, Michiel J. L.;
    • Masayoshi Itoh;
    • Lassmann, Timo;
    • Carninci, Piero;
    • Yoshihide Hayashizaki;
    • Forrest, Alistair R. R.;
    • Bajic, Vladimir B.;
    • Guler, Reto;
    • Brombacher, Frank;
    • Harukazu Suzuki
    Publication type:
    Article
    42

    Optimization of turn-back primers in isothermal amplification.

    Published in:
    Nucleic Acids Research, 2011, v. 39, n. 9, p. e59, doi. 10.1093/nar/gkr041
    By:
    • Kimura, Yasumasa;
    • de Hoon, Michiel J. L.;
    • Aoki, Shintaro;
    • Ishizu, Yuri;
    • Kawai, Yuki;
    • Kogo, Yasushi;
    • Daub, Carsten O.;
    • Lezhava, Alexander;
    • Arner, Erik;
    • Hayashizaki, Yoshihide
    Publication type:
    Article
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    An integrated expression atlas of miRNAs and their promoters in human and mouse.

    Published in:
    Nature Biotechnology, 2017, v. 35, n. 9, p. 872, doi. 10.1038/nbt.3947
    By:
    • de Rie, Derek;
    • Abugessaisa, Imad;
    • Alam, Tanvir;
    • Arner, Erik;
    • Arner, Peter;
    • Ashoor, Haitham;
    • Åström, Gaby;
    • Babina, Magda;
    • Bertin, Nicolas;
    • Burroughs, A Maxwell;
    • Carlisle, Ailsa J;
    • Daub, Carsten O;
    • Detmar, Michael;
    • Deviatiiarov, Ruslan;
    • Fort, Alexandre;
    • Gebhard, Claudia;
    • Goldowitz, Daniel;
    • Guhl, Sven;
    • Ha, Thomas J;
    • Harshbarger, Jayson
    Publication type:
    Article