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Retraction Note: Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition.
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- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-44597-3
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- Article
Adaptation Strategies to High Hydrostatic Pressures in Pseudothermotoga species Revealed by Transcriptional Analyses.
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- Microorganisms, 2023, v. 11, n. 3, p. 773, doi. 10.3390/microorganisms11030773
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- Article
Exploration of bacterial diversity in leaves and rhizosphere soil of flood affected and unaffected apricot trees.
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- Biologia, 2023, v. 78, n. 1, p. 217, doi. 10.1007/s11756-022-01228-y
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- Article
Phage-Host Prediction Using a Computational Tool Coupled with 16S rRNA Gene Amplicon Sequencing.
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- Viruses (1999-4915), 2023, v. 15, n. 1, p. 76, doi. 10.3390/v15010076
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- Article
Increasing Hydrostatic Pressure Impacts the Prokaryotic Diversity during Emiliania huxleyi Aggregates Degradation.
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- Water (20734441), 2021, v. 13, n. 19, p. 2616, doi. 10.3390/w13192616
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- Article
Bacterial diversity and lipid biomarkers in sea ice and sinking particulate organic material during the melt season in the Canadian Arctic.
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- Elementa: Science of the Anthropocene, 2021, v. 9, p. 1, doi. 10.1525/elementa.2021.040
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- Article
Responses to the Hydrostatic Pressure of Surface and Subsurface Strains of Pseudothermotoga elfii Revealing the Piezophilic Nature of the Strain Originating From an Oil-Producing Well.
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- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.588771
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- Article
Prokaryotic Diversity and Distribution Along Physical and Nutrient Gradients in the Tunisian Coastal Waters (South Mediterranean Sea).
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- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.593540
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Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions.
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- Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.00453
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Abundance and diversity of prokaryotes in ephemeral hypersaline lake Chott El Jerid using Illumina Miseq sequencing, DGGE and qPCR assays.
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- Extremophiles, 2018, v. 22, n. 5, p. 811, doi. 10.1007/s00792-018-1040-9
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- Article
Diversity of Rare and Abundant Prokaryotic Phylotypes in the Prony Hydrothermal Field and Comparison with Other Serpentinite-Hosted Ecosystems.
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- Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00102
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- Article
Obligate sugar oxidation in <italic>Mesotoga</italic> spp., phylum <italic>Thermotogae</italic>, in the presence of either elemental sulfur or hydrogenotrophic sulfate‐reducers as electron acceptor.
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- Environmental Microbiology, 2018, v. 20, n. 1, p. 281, doi. 10.1111/1462-2920.13995
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- Article
Microbial Diversity in Sulfate-Reducing Marine Sediment Enrichment Cultures Associated with Anaerobic Biotransformation of Coastal Stockpiled Phosphogypsum (Sfax, Tunisia).
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- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01583
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- Article
Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition.
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- Scientific Reports, 2016, p. 26051, doi. 10.1038/srep26051
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- Article
Glycans affect DNA extraction and induce substantial differences in gut metagenomic studies.
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- Scientific Reports, 2016, p. 26276, doi. 10.1038/srep26276
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- Article
Genomic Insights into a New Citrobacter koseri Strain Revealed Gene Exchanges with the Virulence-Associated Yersinia pestis pPCP1 Plasmid.
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- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00340
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- Article
A Metagenomic Investigation of the Duodenal Microbiota Reveals Links with Obesity.
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- PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0137784
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- Article
Identification of Bacterial Strains Isolated from the Mediterranean Sea Exhibiting Different Abilities of Biofilm Formation.
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- Microbial Ecology, 2014, v. 68, n. 1, p. 94, doi. 10.1007/s00248-013-0342-9
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- Article
Le microbiote intestinal et la digestion des polysaccharides.
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- Médecine Sciences, 2014, v. 30, n. 3, p. 259, doi. 10.1051/medsci/20143003013
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- Article
Polyphasic Analysis of a Middle Ages Coprolite Microbiota, Belgium.
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- PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0088376
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- Article
Development and Validation of a Microarray for the Investigation of the CAZymes Encoded by the Human Gut Microbiome.
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- PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0084033
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- Article
Molecular diversity of the Planctomycetes in the human gut microbiota in France and Senegal.
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- APMIS, 2013, v. 121, n. 11, p. 1082, doi. 10.1111/apm.12087
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The abundance and variety of carbohydrate-active enzymes in the human gut microbiota.
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- Nature Reviews Microbiology, 2013, v. 11, n. 7, p. 497, doi. 10.1038/nrmicro3050
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Human gut microbiota: repertoire and variations.
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- Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00136
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Human gut microbiota: repertoire and variations.
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- Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00136
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- Article
Genomotyping of Coxiella burnetii Using Microarrays Reveals a Conserved Genomotype for Hard Tick Isolates.
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- PLoS ONE, 2011, v. 6, n. 10, p. 1, doi. 10.1371/journal.pone.0025781
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Coxiella burnetii Transcriptional Analysis Reveals Serendipity Clusters of Regulation in Intracellular Bacteria.
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- PLoS ONE, 2010, v. 5, n. 12, p. 1, doi. 10.1371/journal.pone.0015321
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Monitoring Bacterial Community of Human Gut Microbiota Reveals an Increase in Lactobacillus in Obese Patients and Methanogens in Anorexic Patients.
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- PLoS ONE, 2009, v. 4, n. 9, p. 1, doi. 10.1371/journal.pone.0007125
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- Article
The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods.
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- Nucleic Acids Research, 2007, v. 35, n. suppl_2, p. W645, doi. 10.1093/nar/gkm333
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- Article
APDB: a web server to evaluate the accuracy of sequence alignments using structural information.
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- Bioinformatics, 2006, v. 22, n. 19, p. 2439, doi. 10.1093/bioinformatics/btl404
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PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments.
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- Nucleic Acids Research, 2006, v. 34, n. 11, p. w600, doi. 10.1093/nar/gkl170
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Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee.
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- Nucleic Acids Research, 2006, v. 34, n. 11, p. w604, doi. 10.1093/nar/gkl092
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- Article