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Nitrogen accountancy in space agriculture.
- Published in:
- NPJ Microgravity, 2024, v. 10, n. 1, p. 1, doi. 10.1038/s41526-024-00428-x
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- Article
High-throughput mapping of the phage resistance landscape in E. coli.
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- PLoS Biology, 2020, v. 18, n. 10, p. 1, doi. 10.1371/journal.pbio.3000877
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- Article
The Histidine Operon Is Ancient.
- Published in:
- Journal of Molecular Evolution, 2006, v. 62, n. 6, p. 807, doi. 10.1007/s00239-005-0191-3
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- Article
A Theoretical Lower Bound for Selection on the Expression Levels of Proteins.
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- Genome Biology & Evolution, 2016, v. 8, n. 6, p. 1917, doi. 10.1093/gbe/evw126
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- Article
Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts.
- Published in:
- Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-017-0927-5
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- Article
Validating regulatory predictions from diverse bacteria with mutant fitness data.
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- PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0178258
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- Article
System-Wide Adaptations of Desulfovibrio alaskensis G20 to Phosphate-Limited Conditions.
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- PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0168719
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- Article
A Comparison of the Costs and Benefits of Bacterial Gene Expression.
- Published in:
- PLoS ONE, 2016, v. 11, n. 10, p. 1, doi. 10.1371/journal.pone.0164314
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- Article
RegPrecise 3.0 -- A resource for genome-scale exploration of transcriptional regulation in bacteria.
- Published in:
- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-745
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- Article
RegTransBase - a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-213
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- Article
Transcriptomic and proteomic analyses of Desulfovibrio vulgaris biofilms: Carbon and energy flow contribute to the distinct biofilm growth state.
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- BMC Genomics, 2012, v. 13, n. 1, p. 138, doi. 10.1186/1471-2164-13-138
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- Article
Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus.
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- BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-S1-S3
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- Article
Ten simple rules for getting and giving credit for data.
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- PLoS Computational Biology, 2022, v. 18, n. 9, p. 1, doi. 10.1371/journal.pcbi.1010476
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- Article
Eliminating genes for a two‐component system increases PHB productivity in Cupriavidus basilensis 4G11 under PHB suppressing, nonstress conditions.
- Published in:
- Biotechnology & Bioengineering, 2024, v. 121, n. 1, p. 139, doi. 10.1002/bit.28532
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- Article
Data‐driven flow‐map models for data‐efficient discovery of dynamics and fast uncertainty quantification of biological and biochemical systems.
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- Biotechnology & Bioengineering, 2023, v. 120, n. 3, p. 803, doi. 10.1002/bit.28295
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- Article
Engineering Rhodosporidium toruloides for increased lipid production.
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- Biotechnology & Bioengineering, 2016, v. 113, n. 5, p. 1056, doi. 10.1002/bit.25864
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- Article
The Bacillus subtilis sin Operon: An Evolvable Network Motif.
- Published in:
- Genetics, 2005, v. 169, n. 3, p. 1187, doi. 10.1534/genetics.104.031955
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- Article
A Defined Medium for Cultivation and Exometabolite Profiling of Soil Bacteria.
- Published in:
- Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.855331
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- Article
Biofilm Interaction Mapping and Analysis (BIMA) of Interspecific Interactions in Pseudomonas Co-culture Biofilms.
- Published in:
- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.757856
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- Article
Evaluating the Cost of Pharmaceutical Purification for a Long-Duration Space Exploration Medical Foundry.
- Published in:
- Frontiers in Microbiology, 2021, p. 1, doi. 10.3389/fmicb.2021.700863
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- Article
A versatile platform strain for high-fidelity multiplex genome editing.
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- Nucleic Acids Research, 2019, v. 47, n. 6, p. 3244, doi. 10.1093/nar/gkz085
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- Article
Transcript level and sequence determinants of protein abundance and noise in Escherichia coli.
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- Nucleic Acids Research, 2014, v. 42, n. 8, p. 4791, doi. 10.1093/nar/gku126
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- Article
Measurement and modeling of intrinsic transcription terminators.
- Published in:
- Nucleic Acids Research, 2013, v. 41, n. 9, p. 5139, doi. 10.1093/nar/gkt163
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- Article
A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18560-z
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- Article
Manipulation of the carbon storage regulator system for metabolite remodeling and biofuel production in Escherichia coli.
- Published in:
- Microbial Cell Factories, 2012, v. 11, n. 1, p. 79, doi. 10.1186/1475-2859-11-79
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- Article
A method for achieving complete microbial genomes and improving bins from metagenomics data.
- Published in:
- PLoS Computational Biology, 2021, v. 17, n. 5, p. 1, doi. 10.1371/journal.pcbi.1008972
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- Article
Design and Diversity in Bacterial Chemotaxis: A Comparative Study in Escherichia coli and Bacillus subtilis.
- Published in:
- PLoS Biology, 2004, v. 2, n. 2, p. 1, doi. 10.1371/journal.pbio.0020049
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- Article
Design and Diversity in Bacterial Chemotaxis: A Comparative Study in Escherichia coli and Bacillus subtilis.
- Published in:
- PLoS Biology, 2004, v. 2, n. 2, p. 0239, doi. 10.1371/journal.pbio.0020049
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- Article
A tightly regulated inducible expression system utilizing the fim inversion recombination switch.
- Published in:
- Biotechnology & Bioengineering, 2006, v. 94, n. 1, p. 1, doi. 10.1002/bit.20916
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- Article
Production of PHB From CO<sub>2</sub>-Derived Acetate With Minimal Processing Assessed for Space Biomanufacturing.
- Published in:
- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.700010
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- Article
Mechanism Across Scales: A Holistic Modeling Framework Integrating Laboratory and Field Studies for Microbial Ecology.
- Published in:
- Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.642422
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- Article
Characterization of a Metal-Resistant Bacillus Strain With a High Molybdate Affinity ModA From Contaminated Sediments at the Oak Ridge Reservation.
- Published in:
- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.587127
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- Article
Control of methionine metabolism by the SahR transcriptional regulator in Proteobacteria.
- Published in:
- Environmental Microbiology, 2014, v. 16, n. 1, p. 1, doi. 10.1111/1462-2920.12273
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- Article
Hydrogen peroxide-induced oxidative stress responses in Desulfovibrio vulgaris Hildenborough.
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- Environmental Microbiology, 2010, v. 12, n. 10, p. 2645, doi. 10.1111/j.1462-2920.2010.02234.x
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- Article
Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity.
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- Environmental Microbiology, 2009, v. 11, n. 9, p. 2244, doi. 10.1111/j.1462-2920.2009.01946.x
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- Article
Quantifying the local adaptive landscape of a nascent bacterial community.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-022-35677-5
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- Article
Control of Stochastic Gene Expression by Host Factors at the HIV Promoter.
- Published in:
- PLoS Pathogens, 2009, v. 5, n. 1, p. 1, doi. 10.1371/journal.ppat.1000260
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- Article
Genetic Selection for Context-Dependent Stochastic Phenotypes: Sp1 and TATA Mutations Increase Phenotypic Noise in HIV-1 Gene Expression.
- Published in:
- PLoS Computational Biology, 2013, v. 9, n. 7, p. 1, doi. 10.1371/journal.pcbi.1003135
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- Article
Metallochaperones Regulate Intracellular Copper Levels.
- Published in:
- PLoS Computational Biology, 2013, v. 9, n. 1, p. 1, doi. 10.1371/journal.pcbi.1002880
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- Article
HIV Promoter Integration Site Primarily Modulates Transcriptional Burst Size Rather Than Frequency.
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- PLoS Computational Biology, 2010, v. 6, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000952
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- Article
Computational Models of HIV-1 Resistance to Gene Therapy Elucidate Therapy Design Principles.
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- PLoS Computational Biology, 2010, v. 6, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000883
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- Article
Detailed Simulations of Cell Biology with Smoldyn 2.1.
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- PLoS Computational Biology, 2010, v. 6, n. 3, p. 1, doi. 10.1371/journal.pcbi.1000705
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- Publication type:
- Article
A Dual Receptor Crosstalk Model of G-Protein-Coupled Signal Transduction.
- Published in:
- PLoS Computational Biology, 2008, v. 4, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000185
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- Article
Orthologous Transcription Factors in Bacteria Have Different Functions and Regulate Different Genes.
- Published in:
- PLoS Computational Biology, 2007, v. 3, n. 9, p. 1739, doi. 10.1371/journal.pcbi.0030175
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- Article
Dissimilatory Metabolism of Nitrogen Oxides in Bacteria: Comparative Reconstruction of Transcriptional Networks.
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- PLoS Computational Biology, 2005, v. 1, n. 5, p. 415, doi. 10.1371/journal.pcbi.0010055
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- Publication type:
- Article
A versatile framework for microbial engineering using synthetic non-coding RNAs.
- Published in:
- Nature Reviews Microbiology, 2014, v. 12, n. 5, p. 341, doi. 10.1038/nrmicro3244
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- Article
In-field bioreactors demonstrate dynamic shifts in microbial communities in response to geochemical perturbations.
- Published in:
- PLoS ONE, 2020, v. 15, n. 9, p. 1, doi. 10.1371/journal.pone.0232437
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- Article
Rationally designed families of orthogonal RNA regulators of translation.
- Published in:
- Nature Chemical Biology, 2012, v. 8, n. 5, p. 447, doi. 10.1038/nchembio.919
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- Article
Environmental signal integration by a modular AND gate.
- Published in:
- Molecular Systems Biology, 2007, v. 3, n. 1, p. 133, doi. 10.1038/msb4100173
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- Article
D-Tailor: automated analysis and design of DNA sequences.
- Published in:
- Bioinformatics, 2014, v. 30, n. 8, p. 1087, doi. 10.1093/bioinformatics/btt742
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- Article