Works by Arighi, Cecilia N.

Results: 35
    1

    The Protein Ontology: a structured representation of protein forms and complexes.

    Published in:
    Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D539, doi. 10.1093/nar/gkq907
    By:
    • Natale, Darren A.;
    • Arighi, Cecilia N.;
    • Barker, Winona C.;
    • Blake, Judith A.;
    • Bult, Carol J.;
    • Caudy, Michael;
    • Drabkin, Harold J.;
    • D’Eustachio, Peter;
    • Evsikov, Alexei V.;
    • Huang, Hongzhan;
    • Nchoutmboube, Jules;
    • Roberts, Natalia V.;
    • Smith, Barry;
    • Zhang, Jian;
    • Wu, Cathy H.
    Publication type:
    Article
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    Hagit Shatkay-Reshef 1965–2022.

    Published in:
    Bioinformatics Advances, 2022, v. 2, n. 1, p. 1, doi. 10.1093/bioadv/vbac012
    By:
    • Arighi, Cecilia N
    Publication type:
    Article
    7

    BioCreative III interactive task: an overview.

    Published in:
    BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S4
    By:
    • Arighi, Cecilia N;
    • Roberts, Phoebe M;
    • Agarwal, Shashank;
    • Bhattacharya, Sanmitra;
    • Cesareni, Gianni;
    • Chatr-aryamontri, Andrew;
    • Clematide, Simon;
    • Gaudet, Pascale;
    • Giglio, Michelle Gwinn;
    • Harrow, Ian;
    • Huala, Eva;
    • Krallinger, Martin;
    • Leser, Ulf;
    • Li, Donghui;
    • Liu, Feifan;
    • Lu, Zhiyong;
    • Maltais, Lois J;
    • Okazaki, Naoaki;
    • Perfetto, Livia;
    • Rinaldi, Fabio
    Publication type:
    Article
    8

    Overview of the BioCreative III Workshop.

    Published in:
    BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S1
    By:
    • Arighi, Cecilia N.;
    • Lu, Zhiyong;
    • Krallinger, Martin;
    • Cohen, Kevin B.;
    • Wilbur, W. John;
    • Valencia, Alfonso;
    • Hirschman, Lynette;
    • Wu, Cathy H.
    Publication type:
    Article
    9

    TGF-beta signaling proteins and the Protein Ontology.

    Published in:
    BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S5-S3
    By:
    • Arighi, Cecilia N.;
    • Hongfang Liu;
    • Natale, Darren A.;
    • Barker, Winona C.;
    • Drabkin, Harold;
    • Blake, Judith A.;
    • Smith, Barry;
    • Wu, Cathy H.
    Publication type:
    Article
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    Framework for a Protein Ontology.

    Published in:
    BMC Bioinformatics, 2007, v. 8, p. 1, doi. 10.1186/1471-2105-8-S9-S1
    By:
    • Natale, Darren A.;
    • Arighi, Cecilia N.;
    • Barker, Winona C.;
    • Blake, Judith;
    • Ti-Cheng Chang;
    • Zhangzhi Hu;
    • Hongfang Liu;
    • Smith, Barry;
    • Wu, Cathy H.
    Publication type:
    Article
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    Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.

    Published in:
    Nucleic Acids Research, 2017, v. 45, n. D1, p. D339, doi. 10.1093/nar/gkw1075
    By:
    • Natale, Darren A.;
    • Arighi, Cecilia N.;
    • Blake, Judith A.;
    • Bona, Jonathan;
    • Chuming Chen;
    • Sheng-Chih Chen;
    • Christie, Karen R.;
    • Cowart, Julie;
    • D’Eustachio, Peter;
    • Diehl, Alexander D.;
    • Drabkin, Harold J.;
    • Duncan, William D.;
    • Huang, Hongzhan;
    • Ren, Jia;
    • Ross, Karen;
    • Ruttenberg, Alan;
    • Shamovsky, Veronica;
    • Smith, Barry;
    • Qinghua Wang;
    • Jian Zhang
    Publication type:
    Article
    15

    Protein Ontology: a controlled structured network of protein entities.

    Published in:
    Nucleic Acids Research, 2014, v. 42, n. D1, p. D415, doi. 10.1093/nar/gkt1173
    By:
    • Natale, Darren A.;
    • Arighi, Cecilia N.;
    • Blake, Judith A.;
    • Bult, Carol J.;
    • Christie, Karen R.;
    • Cowart, Julie;
    • D’Eustachio, Peter;
    • Diehl, Alexander D.;
    • Drabkin, Harold J.;
    • Helfer, Olivia;
    • Huang, Hongzhan;
    • Masci, Anna Maria;
    • Ren, Jia;
    • Roberts, Natalia V.;
    • Ross, Karen;
    • Ruttenberg, Alan;
    • Shamovsky, Veronica;
    • Smith, Barry;
    • Yerramalla, Meher Shruti;
    • Zhang, Jian
    Publication type:
    Article
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    Overview of the gene ontology task at BioCreative IV.

    Published in:
    Database: The Journal of Biological Databases & Curation, 2014, v. 2014, p. 1, doi. 10.1093/database/bau086
    By:
    • Yuqing Mao;
    • Van Auken, Kimberly;
    • Donghui Li;
    • Arighi, Cecilia N.;
    • McQuilton, Peter;
    • Hayman, G. Thomas;
    • Tweedie, Susan;
    • Schaeffer, Mary L.;
    • Laulederkind, Stanley J. F.;
    • Shur-Jen Wang;
    • Gobeill, Julien;
    • Ruch, Patrick;
    • Anh Tuan Luu;
    • Jung-jae Kim;
    • Jung-Hsien Chiang;
    • Yu-De Chen;
    • Chia-Jung Yang;
    • Hongfang Liu;
    • Dongqing Zhu;
    • Yanpeng Li
    Publication type:
    Article
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    BC4GO: a full-text corpus for the BioCreative IV GO task.

    Published in:
    Database: The Journal of Biological Databases & Curation, 2014, v. 2014, p. 1, doi. 10.1093/database/bau074
    By:
    • Van Auken, Kimberly;
    • Schaeffer, Mary L.;
    • McQuilton, Peter;
    • Laulederkind, Stanley J. F.;
    • Donghui Li;
    • Shur-Jen Wang;
    • Hayman, G. Thomas;
    • Tweedie, Susan;
    • Arighi, Cecilia N.;
    • Done, James;
    • Müller, Hans-Michael;
    • Sternberg, Paul W.;
    • Yuqing Mao;
    • Chih-Hsuan Wei;
    • Zhiyong Lu
    Publication type:
    Article
    26

    BioCreative-IV virtual issue.

    Published in:
    Database: The Journal of Biological Databases & Curation, 2014, v. 2014, p. 1, doi. 10.1093/database/bau039
    By:
    • Arighi, Cecilia N.;
    • Wu, Cathy H.;
    • Cohen, Kevin B.;
    • Hirschman, Lynette;
    • Krallinger, Martin;
    • Valencia, Alfonso;
    • Zhiyong Lu;
    • Wilbur, John W.;
    • Wiegers, Thomas C.
    Publication type:
    Article
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    An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.

    Published in:
    Database: The Journal of Biological Databases & Curation, 2013, v. 2013, p. 1, doi. 10.1093/database/bas056
    By:
    • Arighi, Cecilia N.;
    • Carterette, Ben;
    • Cohen, K. Bretonnel;
    • Krallinger, Martin;
    • Wilbur, W. John;
    • Fey, Petra;
    • Dodson, Robert;
    • Cooper, Laurel;
    • Van Slyke, Ceri E.;
    • Dahdul, Wasila;
    • Mabee, Paula;
    • Donghui Li;
    • Harris, Bethany;
    • Gillespie, Marc;
    • Jimenez, Silvia;
    • Roberts, Phoebe;
    • Matthews, Lisa;
    • Becker, Kevin;
    • Drabkin, Harold;
    • Bello, Susan
    Publication type:
    Article
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    Community annotation and bioinformatics workforce development in concert—Little Skate Genome Annotation Workshops and Jamborees.

    Published in:
    Database: The Journal of Biological Databases & Curation, 2012, v. 2012, p. 1, doi. 10.1093/database/bar064
    By:
    • Wang, Qinghua;
    • Arighi, Cecilia N.;
    • King, Benjamin L.;
    • Polson, Shawn W.;
    • Vincent, James;
    • Chen, Chuming;
    • Huang, Hongzhan;
    • Kingham, Brewster F.;
    • Page, Shallee T.;
    • Farnum Rendino, Marc;
    • Thomas, William Kelley;
    • Udwary, Daniel W.;
    • Wu, Cathy H.
    Publication type:
    Article
    32

    BioCreative-2012 Virtual Issue.

    Published in:
    2012
    By:
    • Wu, Cathy H.;
    • Arighi, Cecilia N.;
    • Cohen, Kevin B.;
    • Hirschman, Lynette;
    • Krallinger, Martin;
    • Lu, Zhiyong;
    • Mattingly, Carolyn;
    • Valencia, Alfonso;
    • Wiegers, Thomas C.;
    • John Wilbur, W.
    Publication type:
    Editorial
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