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Association testing of variants in the hepatocyte nuclear factor 4alpha gene with risk of type 2 diabetes in 7,883 people.
Published in:
2005
By:
- Winckler, Wendy;
- R. Graham, Robert;
- de Bakker, Paul I.W.;
- Sun, Maria;
- Almgren, Peter;
- Tuomi, Tiinamaija;
- Gaudet, Daniel;
- Hudson, Thomas J.;
- G. Ardlie, Kristin;
- Daly, Mark J.;
- Hirschhorn, Joel N.;
- Groop, Leif;
- Altshuler, David;
- Graham, Robert R;
- Ardlie, Kristin G
Publication type:
journal article
Machine learning‐based clustering identifies obesity subgroups with differential multi‐omics profiles and metabolic patterns.
Published in:
Obesity (19307381), 2024, v. 32, n. 11, p. 2024, doi. 10.1002/oby.24137
By:
- Anwar, Mohammad Y.;
- Highland, Heather;
- Buchanan, Victoria Lynn;
- Graff, Mariaelisa;
- Young, Kristin;
- Taylor, Kent D.;
- Tracy, Russell P.;
- Durda, Peter;
- Liu, Yongmei;
- Johnson, Craig W.;
- Aguet, Francois;
- Ardlie, Kristin G.;
- Gerszten, Robert E.;
- Clish, Clary B.;
- Lange, Leslie A.;
- Ding, Jingzhong;
- Goodarzi, Mark O.;
- Chen, Yii‐Der Ida;
- Peloso, Gina M.;
- Guo, Xiuqing
Publication type:
Article
Higher Maternal Body Mass Index Is Associated With Lower Placental Expression of EPYC: A Genome-Wide Transcriptomic Study.
Published in:
Journal of Clinical Endocrinology & Metabolism, 2024, v. 109, n. 3, p. e1159, doi. 10.1210/clinem/dgad619
By:
- Sordillo, Joanne E.;
- White, Frédérique;
- Majid, Sana;
- Aguet, François;
- Ardlie, Kristin G.;
- Karumanchi, S. Ananth;
- Florez, Jose C.;
- Powe, Camille E.;
- Edlow, Andrea G.;
- Bouchard, Luigi;
- Jacques, Pierre-Etienne;
- Hivert, Marie-France
Publication type:
Article
Low frequency of mouse t haplotypes in wild populations is not explained by modifiers of meiotic...
Published in:
Genetics, 1996, v. 144, n. 4, p. 1787, doi. 10.1093/genetics/144.4.1787
By:
- Ardlie, Kristin G.;
- Silver, Lee M.
Publication type:
Article
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk loci.
Published in:
Nature Genetics, 2010, v. 42, n. 6, p. 508, doi. 10.1038/ng.582
By:
- Stahl, Eli A.;
- Raychaudhuri, Soumya;
- Remmers, Elaine F.;
- Gang Xie;
- Eyre, Stephen;
- Thomson, Brian P.;
- Yonghong Li;
- Kurreeman, Fina A. S.;
- Zhernakova, Alexandra;
- Hinks, Anne;
- Guiducci, Candace;
- Chen, Robert;
- Alfredsson, Lars;
- Amos, Christopher I.;
- Ardlie, Kristin G.;
- Barton, Anne;
- Bowes, John;
- Brouwer, Elisabeth;
- Burtt, Noel P.;
- Catanese, Joseph J.
Publication type:
Article
Genetic variants at CD28, PRDM1 and CD2/CD58 are associated with rheumatoid arthritis risk.
Published in:
Nature Genetics, 2009, v. 41, n. 12, p. 1313, doi. 10.1038/ng.479
By:
- Raychaudhuri, Soumya;
- Thomson, Brian P.;
- Remmers, Elaine F.;
- Eyre, Stephen;
- Hinks, Anne;
- Guiducci, Candace;
- Catanese, Joseph J.;
- Gang Xie;
- Stahl, Eli A.;
- Chen, Robert;
- Alfredsson, Lars;
- Amos, Christopher I.;
- Ardlie, Kristin G.;
- Barton, Anne;
- Bowes, John;
- Burtt, Noel P.;
- Chang, Monica;
- Coblyn, Jonathan;
- Costenbader, Karen H.;
- Criswell, Lindsey A.
Publication type:
Article
Demonstrating stratification in a European American population.
Published in:
Nature Genetics, 2005, v. 37, n. 8, p. 868, doi. 10.1038/ng1607
By:
- Campbell, Catarina D.;
- Ogburn, Elizabeth L.;
- Lunetta, Kathryn L.;
- Lyon, Helen N.;
- Freedman, Matthew L.;
- Groop, Leif C.;
- Altshuler, David;
- Ardlie, Kristin G.;
- Hirschhorn, Joel N.
Publication type:
Article
RNA-SeQC 2: efficient RNA-seq quality control and quantification for large cohorts.
Published in:
Bioinformatics, 2021, v. 37, n. 18, p. 3048, doi. 10.1093/bioinformatics/btab135
By:
- Graubert, Aaron;
- Aguet, François;
- Ravi, Arvind;
- Ardlie, Kristin G;
- Getz, Gad
Publication type:
Article
sn-spMF: matrix factorization informs tissue-specific genetic regulation of gene expression.
Published in:
Genome Biology, 2020, v. 21, p. 1, doi. 10.1186/s13059-020-02129-6
By:
- He, Yuan;
- Chhetri, Surya B.;
- Arvanitis, Marios;
- Srinivasan, Kaushik;
- Aguet, François;
- Ardlie, Kristin G.;
- Barbeira, Alvaro N.;
- Bonazzola, Rodrigo;
- Im, Hae Kyung;
- Brown, Christopher D.;
- Battle, Alexis
Publication type:
Article
A vast resource of allelic expression data spanning human tissues.
Published in:
Genome Biology, 2020, v. 21, p. 1, doi. 10.1186/s13059-020-02122-z
By:
- Castel, Stephane E.;
- Aguet, François;
- Mohammadi, Pejman;
- GTEx Consortium;
- Anand, Shankara;
- Ardlie, Kristin G.;
- Gabriel, Stacey;
- Getz, Gad A.;
- Graubert, Aaron;
- Hadley, Kane;
- Handsaker, Robert E.;
- Huang, Katherine H.;
- Kashin, Seva;
- Li, Xiao;
- MacArthur, Daniel G.;
- Meier, Samuel R.;
- Nedzel, Jared L.;
- Nguyen, Duyen T.;
- Segrè, Ayellet V.;
- Todres, Ellen
Publication type:
Article
Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx.
Published in:
Genome Biology, 2020, v. 21, p. 1, doi. 10.1186/s13059-020-02113-0
By:
- Gay, Nicole R.;
- Gloudemans, Michael;
- Antonio, Margaret L.;
- Abell, Nathan S.;
- Balliu, Brunilda;
- Park, YoSon;
- Martin, Alicia R.;
- Musharoff, Shaila;
- Rao, Abhiram S.;
- Aguet, François;
- Barbeira, Alvaro N.;
- Bonazzola, Rodrigo;
- Hormozdiari, Farhad;
- Ardlie, Kristin G.;
- Brown, Christopher D.;
- Im, Hae Kyung;
- Lappalainen, Tuuli;
- Wen, Xiaoquan;
- Montgomery, Stephen B.
Publication type:
Article
Collaborative Design for Automated DNA Storage That Allows for Rapid, Accurate, Large-Scale Studies.
Published in:
Assay & Drug Development Technologies, 2004, v. 2, n. 6, p. 683
By:
- Scott Mahan;
- Kristin G. Ardlie;
- Kevin F. Krenitsky;
- Gary Walsh;
- Graham Clough
Publication type:
Article
PATTERNS OF LINKAGE DISEQUILIBRIUM IN THE HUMAN GENOME.
Published in:
Nature Reviews Genetics, 2002, v. 3, n. 4, p. 299, doi. 10.1038/nrg777
By:
- Ardlie, Kristin G.;
- Kruglyak, Leonid;
- Seielstad, Mark
Publication type:
Article
Initial genome sequencing and analysis of multiple myeloma.
Published in:
Nature, 2011, v. 471, n. 7339, p. 467, doi. 10.1038/nature09837
By:
- Chapman, Michael A.;
- Lawrence, Michael S.;
- Keats, Jonathan J.;
- Cibulskis, Kristian;
- Sougnez, Carrie;
- Schinzel, Anna C.;
- Harview, Christina L.;
- Brunet, Jean-Philippe;
- Ahmann, Gregory J.;
- Adli, Mazhar;
- Anderson, Kenneth C.;
- Ardlie, Kristin G.;
- Auclair, Daniel;
- Baker, Angela;
- Bergsagel, P. Leif;
- Bernstein, Bradley E.;
- Drier, Yotam;
- Fonseca, Rafael;
- Gabriel, Stacey B.;
- Hofmeister, Craig C.
Publication type:
Article
Recent evolution of mouse t haplotypes at polymorphic microsatellites associated with the t complex responder (Tcr) locus.
Published in:
Genetics Research, 1996, v. 67, n. 1, p. 1, doi. 10.1017/S0016672300033425
By:
- Ardlie, Kristin G.;
- Silver, Lee M.
Publication type:
Article
The septic shock associated HSPA1B1267 polymorphism influences production of HSPA1A and HSPA1B.
Published in:
2004
By:
- Temple, Suzanna;
- Cheong, Karey;
- Ardlie, Kristin;
- Sayer, David;
- Waterer, Grant;
- Temple, Suzanna E L;
- Cheong, Karey Y;
- Ardlie, Kristin G;
- Waterer, Grant W
Publication type:
journal article
Association Studies of BMI and Type 2 Diabetes in the Neuropeptide Y Pathway.
Published in:
Diabetes, 2007, v. 56, n. 5, p. 1460, doi. 10.2337/db06-1051
By:
- Campbell, Catarina D.;
- Lyon, Helen N.;
- Nemesh, James;
- Drake, Jared A.;
- Tuomi, Tiinamaija;
- Gaudet, Daniel;
- Zhu, Xiaofeng;
- Cooper, Richard S.;
- Ardlie, Kristin G.;
- Groop, Leif C.;
- Hirschhorn, Joel N.
Publication type:
Article
Evaluation of Common Variants in the Six Known Maturity-Onset Diabetes of the Young (MODY) Genes for Association With Type 2 Diabetes.
Published in:
Diabetes, 2007, v. 56, n. 3, p. 685, doi. 10.2337/db06-0202
By:
- Winckler, Wendy;
- Weedon, Michael N.;
- Graham, Robert R.;
- McCarroll, Steven A.;
- Purcell, Shaun;
- Almgren, Peter;
- Tuomi, Tiinamaija;
- Gaudet, Daniel;
- Boström, Kristina Bengtsson;
- Walker, Mark;
- Hitman, Graham;
- Hattersley, Andrew T.;
- McCarthy, Mark I.;
- Ardlie, Kristin G.;
- Hirschhorn, Joel N.;
- Daly, Mark J.;
- Frayling, Timothy M.;
- Groop, Leif;
- Altshuler, David
Publication type:
Article
The Krüppel-Like Factor 11 (KLF11) Q62R Polymorphism Is Not Associated With Type 2 Diabetes in 8,676 People.
Published in:
Diabetes, 2006, v. 55, n. 12, p. 3620, doi. 10.2337/db06-0867
By:
- Florez, Jose C.;
- Saxena, Richa;
- Winckler, Wendy;
- Burtt, Noël P.;
- Almgren, Peter;
- Boström, Kristina Bengtsson;
- Tuomi, Tiinamaija;
- Gaudet, Daniel;
- Ardlie, Kristin G.;
- Daly, Mark J.;
- Altshuler, David;
- Hirschhorn, Joel N.;
- Groop, Leif
Publication type:
Article
Common Variants in the ENPP1 Gene Are Not Reproducibly Associated With Diabetes or Obesity.
Published in:
Diabetes, 2006, v. 55, n. 11, p. 3180, doi. 10.2337/db06-0407
By:
- Lyon, Helen N.;
- Florez, Jose C.;
- Bersaglieri, Todd;
- Saxena, Richa;
- Winckler, Wendy;
- Almgren, Peter;
- Lindblad, Ulf;
- Tuomi, Tiinamaija;
- Gaudet, Daniel;
- Xiaofeng Zhu;
- Cooper, Richard;
- Ardlie, Kristin G.;
- Daly, Mark J.;
- Altshuler, David;
- Groop, Leif;
- Hirschhorn, Joel N.
Publication type:
Article
Common Single Nucleotide Polymorphisms in TCF7L2 Are Reproducibly Associated With Type 2 Diabetes and Reduce the Insulin Response to Glucose in Nondiabetic Individuals.
Published in:
Diabetes, 2006, v. 55, n. 10, p. 2890, doi. 10.2337/db06-0381
By:
- Saxena, Richa;
- Gianniny, Lauren;
- Burtt, Noël P.;
- Lyssenko, Valeriya;
- Giuducci, Candace;
- Sjögren, Marketa;
- Florez, Jose C.;
- Almgren, Peter;
- Isomaa, Bo;
- Orho-Melander, Marju;
- Lindblad, Ulf;
- Daly, Mark J.;
- Tuomi, Tiinamaija;
- Hirschhorn, Joel N.;
- Ardlie, Kristin G.;
- Groop, Leif C.;
- Altshuler, David
Publication type:
Article
Association of Common Variation in the HNF1α Gene Region With Risk of Type 2 Diabetes.
Published in:
Diabetes, 2005, v. 54, n. 8, p. 2336, doi. 10.2337/diabetes.54.8.2336
By:
- Winckler, Wendy;
- Burtt, Noël P.;
- Holmkvist, Johan;
- Cervin, Camilla;
- de Bakker, Paul I. W.;
- Sun, Maria;
- Almgren, Peter;
- Tuomi, Tiinamaija;
- Gaudet, Daniel;
- Hudson, Thomas J.;
- Ardlie, Kristin G.;
- Daly, Mark J.;
- Hirschhorn, Joel N.;
- Altshuler, David;
- Groop, Leif
Publication type:
Article
Association testing of the protein tyrosine phosphatase 1B gene (PTPN1) with type 2 diabetes in 7,883 people.
Published in:
2005
By:
- Florez, Jose C.;
- Agapakis, Christina M.;
- Burtt, Noel P.;
- Sun, Maria;
- Almgren, Peter;
- Råstam, Lennart;
- Tuomi, Tiinamaija;
- Gaudet, Daniel;
- Hudson, Thomas J.;
- Daly, Mark J.;
- Ardlie, Kristin G.;
- Hirschhorn, Joel N.;
- Groop, Leif;
- Altshuler, David;
- Burtt, Noël P;
- Råstam, Lennart
Publication type:
journal article
Association testing in 9,000 people fails to confirm the association of the insulin receptor substrate-1 G972R polymorphism with type 2 diabetes.
Published in:
2004
By:
- Florez, Jose C.;
- Sjögren, Marketa;
- Burtt, Noël;
- Orho-Melander, Marju;
- Schayer, Steve;
- Sun, Maria;
- Almgren, Peter;
- Lindblad, Ulf;
- Tuomi, Tiinamaija;
- Gaudet, Daniel;
- Hudson, Thomas J.;
- Daly, Mark J.;
- Ardlie, Kristin G.;
- Hirschhorn, Joel N.;
- Altshuler, David;
- Groop, Leif;
- Sjögren, Marketa;
- Burtt, Noël
Publication type:
journal article
Sequence analysis of mutations and translocations across breast cancer subtypes.
Published in:
Nature, 2012, v. 486, n. 7403, p. 405, doi. 10.1038/nature11154
By:
- Banerji, Shantanu;
- Cibulskis, Kristian;
- Rangel-Escareno, Claudia;
- Brown, Kristin K.;
- Carter, Scott L.;
- Frederick, Abbie M.;
- Lawrence, Michael S.;
- Sivachenko, Andrey Y.;
- Sougnez, Carrie;
- Zou, Lihua;
- Cortes, Maria L.;
- Fernandez-Lopez, Juan C.;
- Peng, Shouyong;
- Ardlie, Kristin G.;
- Auclair, Daniel;
- Bautista-Piña, Veronica;
- Duke, Fujiko;
- Francis, Joshua;
- Jung, Joonil;
- Maffuz-Aziz, Antonio
Publication type:
Article
A Large-Scale Rheumatoid Arthritis Genetic Study Identifies Association at Chromosome 9q33.2.
Published in:
PLoS Genetics, 2008, v. 4, n. 6, p. 1, doi. 10.1371/journal.pgen.1000107
By:
- Chang, Monica;
- Rowland, Charles M.;
- Garcia, Veronica E.;
- Schrodi, Steven J.;
- Catanese, Joseph J.;
- van der Helm-van Mil, Annette H. M.;
- Ardlie, Kristin G.;
- Amos, Christopher I.;
- Criswell, Lindsey A.;
- Kastner, Daniel L.;
- Gregersen, Peter K.;
- Kurreeman, Fina A. S.;
- Toes, Rene E. M.;
- Huizinga, Tom W. J.;
- Seldin, Michael F.;
- Begovich, Ann B.
Publication type:
Article
Alleles carried at positions -819 and -592 of the IL10 promoter affect transcription following stimulation of peripheral blood cells with Streptococcus pneumoniae.
Published in:
Immunogenetics, 2003, v. 55, n. 9, p. 629, doi. 10.1007/s00251-003-0621-6
By:
- Temple, Suzanna E. L.;
- Lim, Esther;
- Cheong, Karey Y.;
- Almeida, Coral-Ann M.;
- Price, Patricia;
- Ardlie, Kristin G.;
- Waterer, Grant W.
Publication type:
Article
Transcription factor regulation of eQTL activity across individuals and tissues.
Published in:
PLoS Genetics, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pgen.1009719
By:
- Flynn, Elise D.;
- Tsu, Athena L.;
- Kasela, Silva;
- Kim-Hellmuth, Sarah;
- Aguet, Francois;
- Ardlie, Kristin G.;
- Bussemaker, Harmen J.;
- Mohammadi, Pejman;
- Lappalainen, Tuuli
Publication type:
Article
Fine‐mapping and QTL tissue‐sharing information improves the reliability of causal gene identification.
Published in:
Genetic Epidemiology, 2020, v. 44, n. 8, p. 854, doi. 10.1002/gepi.22346
By:
- Barbeira, Alvaro N.;
- Melia, Owen J.;
- Liang, Yanyu;
- Bonazzola, Rodrigo;
- Wang, Gao;
- Wheeler, Heather E.;
- Aguet, François;
- Ardlie, Kristin G.;
- Wen, Xiaoquan;
- Im, Hae K.
Publication type:
Article

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