Works by Aran, Dvir

Results: 23

DNA methylation of distal regulatory sites characterizes dysregulation of cancer genes.

Published in:

Genome Biology, 2013, v. 14, n. 3, p. 1, doi. 10.1186/gb-2013-14-3-r21

By:

Aran, Dvir;
Sabato, Sivan;
Hellman, Asaf

Publication type:

Article

Comparative Analysis of First-Line FOLFOX Treatment With and Without Anti-VEGF Therapy in Metastatic Colorectal Carcinoma: A Real-World Data Study.

Published in:

Cancer Control: Journal of the Moffitt Cancer Center, 2023, p. 1, doi. 10.1177/10732748231202470

By:

Brenner, Ronen;
Amar-Farkash, Shlomit;
Klein-Brill, Avital;
Rosenberg-Katz, Keren;
Aran, Dvir

Publication type:

Article

Comprehensive analysis of normal adjacent to tumor transcriptomes.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01027-z

By:

Aran, Dvir;
Camarda, Roman;
Odegaard, Justin;
Hyojung Paik;
Oskotsky, Boris;
Krings, Gregor;
Goga, Andrei;
Sirota, Marina;
Butte, Atul J.

Publication type:

Article

Digitally deconvolving the tumor microenvironment.

Published in:

Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1036-7

By:

Aran, Dvir;
Butte, Atul J.

Publication type:

Article

Widespread parainflammation in human cancer.

Published in:

Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0995-z

By:

Aran, Dvir;
Lasry, Audrey;
Zinger, Adar;
Biton, Moshe;
Pikarsky, Eli;
Hellman, Asaf;
Butte, Atul J.;
Ben-Neriah, Yinon

Publication type:

Article

Human splice factors contribute to latent HIV infection in primary cell models and blood CD4<sup>+</sup> T cells from ART-treated individuals.

Published in:

PLoS Pathogens, 2020, v. 16, n. 11, p. 1, doi. 10.1371/journal.ppat.1009060

By:

Moron-Lopez, Sara;
Telwatte, Sushama;
Sarabia, Indra;
Battivelli, Emilie;
Montano, Mauricio;
Macedo, Amanda B.;
Aran, Dvir;
Butte, Atul J.;
Jones, R. Brad;
Bosque, Alberto;
Verdin, Eric;
Greene, Warner C.;
Wong, Joseph K.;
Yukl, Steven A.

Publication type:

Article

Unmasking risk loci: DNA methylation illuminates the biology of cancer predisposition.

Published in:

BioEssays, 2014, v. 36, n. 2, p. 184, doi. 10.1002/bies.201300119

By:

Aran, Dvir;
Hellman, Asaf

Publication type:

Article

Aging is associated with highly defined epigenetic changes in the human epidermis.

Published in:

Epigenetics & Chromatin, 2013, v. 6, n. 1, p. 2, doi. 10.1186/1756-8935-6-36

By:

Raddatz, Günter;
Hagemann, Sabine;
Aran, Dvir;
Söhle, Jörn;
Kulkarni, Pranav P.;
Kaderali, Lars;
Hellman, Asaf;
Winnefeld, Marc;
Lyko, Frank

Publication type:

Article

Integration of transcription regulation and functional genomic data reveals lncRNA SNHG6's role in hematopoietic differentiation and leukemia.

Published in:

Journal of Biomedical Science, 2024, v. 31, n. 1, p. 1, doi. 10.1186/s12929-024-01015-8

By:

Hazan, Joshua M.;
Amador, Raziel;
Ali-Nasser, Tahleel;
Lahav, Tamar;
Shotan, Stav Roni;
Steinberg, Miryam;
Cohen, Ziv;
Aran, Dvir;
Meiri, David;
Assaraf, Yehuda G.;
Guigó, Roderic;
Bester, Assaf C.

Publication type:

Article

Survival and autoimmune risks post-thymectomy.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1504496

By:

Tsirkin, Irina;
Khateb, Mohamed;
Aran, Dvir;
Kaz, Amit;
Shelly, Shahar

Publication type:

Article

Implementation of machine learning models for the prediction of vaginal birth after cesarean delivery.

Published in:

Journal of Maternal-Fetal & Neonatal Medicine, 2022, v. 35, n. 19, p. 3677, doi. 10.1080/14767058.2020.1837769

By:

Meyer, Raanan;
Hendin, Natav;
Zamir, Michal;
Mor, Nizan;
Levin, Gabriel;
Sivan, Eyal;
Aran, Dvir;
Tsur, Abraham

Publication type:

Article

Comparison of FOLFIRINOX vs Gemcitabine Plus Nab-Paclitaxel as First-Line Chemotherapy for Metastatic Pancreatic Ductal Adenocarcinoma.

Published in:

JAMA Network Open, 2022, v. 5, n. 6, p. e2216199, doi. 10.1001/jamanetworkopen.2022.16199

By:

Klein-Brill, Avital;
Amar-Farkash, Shlomit;
Lawrence, Gabriella;
Collisson, Eric A.;
Aran, Dvir

Publication type:

Article

Corrigendum: Systematic pan-cancer analysis of tumour purity.

Published in:

Nature Communications, 2016, v. 7, n. 2, p. 10707, doi. 10.1038/ncomms10707

By:

Aran, Dvir;
Sirota, Marina;
Butte, Atul J.

Publication type:

Article

Systematic pan-cancer analysis of tumour purity.

Published in:

Nature Communications, 2015, v. 6, n. 12, p. 8971, doi. 10.1038/ncomms9971

By:

Aran, Dvir;
Sirota, Marina;
Butte, Atul J.

Publication type:

Article

Heterogeneity in HIV and cellular transcription profiles in cell line models of latent and productive infection: implications for HIV latency.

Published in:

Retrovirology, 2019, v. 16, n. 1, p. 1, doi. 10.1186/s12977-019-0494-x

By:

Telwatte, Sushama;
Morón-López, Sara;
Aran, Dvir;
Kim, Peggy;
Hsieh, Christine;
Joshi, Sunil;
Montano, Mauricio;
Greene, Warner C.;
Butte, Atul J.;
Wong, Joseph K.;
Yukl, Steven A.

Publication type:

Article

Cross-tissue Analysis of Gene and Protein Expression in Normal and Cancer Tissues.

Published in:

Scientific Reports, 2016, p. 24799, doi. 10.1038/srep24799

By:

Kosti, Idit;
Jain, Nishant;
Aran, Dvir;
Butte, Atul J.;
Sirota, Marina

Publication type:

Article

Genome-wide survey reveals predisposing diabetes type 2-related DNA methylation variations in human peripheral blood.

Published in:

Human Molecular Genetics, 2012, v. 21, n. 2, p. 371, doi. 10.1093/hmg/ddr472

By:

Toperoff, Gidon;
Aran, Dvir;
Kark, Jeremy D.;
Rosenberg, Michael;
Dubnikov, Tatyana;
Nissan, Batel;
Wainstein, Julio;
Friedlander, Yechiel;
Levy-Lahad, Ephrat;
Glaser, Benjamin;
Hellman, Asaf

Publication type:

Article

Replication timing-related and gene body-specific methylation of active human genes.

Published in:

Human Molecular Genetics, 2011, v. 20, n. 4, p. 670, doi. 10.1093/hmg/ddq513

By:

Aran, Dvir;
Toperoff, Gidon;
Rosenberg, Michael;
Hellman, Asaf

Publication type:

Article

Embryonic Stem Cell (ES)-Specific Enhancers Specify the Expression Potential of ES Genes in Cancer.

Published in:

PLoS Genetics, 2016, v. 12, n. 2, p. 1, doi. 10.1371/journal.pgen.1005840

By:

Aran, Dvir;
Abu-Remaileh, Monther;
Levy, Revital;
Meron, Nurit;
Toperoff, Gidon;
Edrei, Yifat;
Bergman, Yehudit;
Hellman, Asaf

Publication type:

Article

Transformer-based time-to-event prediction for chronic kidney disease deterioration.

Published in:

Journal of the American Medical Informatics Association, 2024, v. 31, n. 4, p. 980, doi. 10.1093/jamia/ocae025

By:

Zisser, Moshe;
Aran, Dvir

Publication type:

Article

Molecular programs of fibrotic change in aging human lung.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26603-2

By:

Lee, Seoyeon;
Islam, Mohammad Naimul;
Boostanpour, Kaveh;
Aran, Dvir;
Jin, Guangchun;
Christenson, Stephanie;
Matthay, Michael A.;
Eckalbar, Walter L.;
DePianto, Daryle J.;
Arron, Joseph R.;
Magee, Liam;
Bhattacharya, Sunita;
Matsumoto, Rei;
Kubota, Masaru;
Farber, Donna L.;
Bhattacharya, Jahar;
Wolters, Paul J.;
Bhattacharya, Mallar

Publication type:

Article

xCell: digitally portraying the tissue cellular heterogeneity landscape.

Published in:

Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1349-1

By:

Aran, Dvir;
Zicheng Hu;
Butte, Atul J.

Publication type:

Article

CD161 contributes to prenatal immune suppression of IFNγ-producing PLZF+ T cells.

Published in:

2019

By:

Halkias, Joanna;
Rackaityte, Elze;
Hillman, Sara L.;
Aran, Dvir;
Mendoza, Ventura F.;
Marshall, Lucy R.;
MacKenzie, Tippi C.;
Burt, Trevor D.

Publication type:

journal article