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CT-based radiomics for predicting breast cancer radiotherapy side effects.
- Published in:
- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-70723-w
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- Publication type:
- Article
Statistical guidelines for quality control of next-generation sequencing techniques.
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- Life Science Alliance, 2021, v. 4, n. 11, p. 1, doi. 10.26508/lsa.202101113
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- Publication type:
- Article
Function and Evolution of Nematode RNAi Pathways.
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- Non-Coding RNA, 2019, v. 5, n. 1, p. 1, doi. 10.3390/ncrna5010008
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- Publication type:
- Article
DiseaseLinc: Disease Enrichment Analysis of Sets of Differentially Expressed LincRNAs.
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- Cells (2073-4409), 2021, v. 10, n. 4, p. 751, doi. 10.3390/cells10040751
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- Publication type:
- Article
CABRA: Cluster and Annotate Blast Results Algorithm.
- Published in:
- BMC Research Notes, 2016, v. 9, p. 1, doi. 10.1186/s13104-016-2062-y
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- Publication type:
- Article
Peer2ref: a peer-reviewer finding web tool that uses author disambiguation.
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- BioData Mining, 2012, v. 5, n. 1, p. 14, doi. 10.1186/1756-0381-5-14
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- Publication type:
- Article
Literature optimized integration of gene expression for organ-specific evaluation of toxicogenomics datasets.
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- PLoS ONE, 2019, v. 14, n. 1, p. 1, doi. 10.1371/journal.pone.0210467
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- Publication type:
- Article
MLTrends: Graphing MEDLINE term usage over time.
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- Journal of Biomedical Discovery & Collaboration, 2010, v. 5, p. 1, doi. 10.5210/disco.v5i0.2680
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- Publication type:
- Article
Short tandem repeats in the inhibitory domain of the mineralocorticoid receptor: prediction of a β-solenoid structure.
- Published in:
- BMC Structural Biology, 2013, v. 13, p. 1, doi. 10.1186/1472-6807-13-17
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- Article
K2D2: Estimation of protein secondary structure from circular dichroism spectra.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-25
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- Publication type:
- Article
MGFM: a novel tool for detection of tissue and cell specific marker genes from microarray gene expression data.
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- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1785-9
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- Article
Preimplantation development regulatory pathway construction through a text-mining approach.
- Published in:
- BMC Genomics, 2011, v. 12, n. Suppl 4, p. 1, doi. 10.1186/1471-2164-12-S4-S3
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- Publication type:
- Article
A method for cell type marker discovery by high-throughput gene expression analysis of mixed cell populations.
- Published in:
- BMC Biotechnology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1472-6750-13-80
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- Publication type:
- Article
Evolution-guided evaluation of the inverted terminal repeats of the synthetic transposon Sleeping Beauty.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-018-38061-w
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- Publication type:
- Article
Stepwise reprogramming of liver cells to a pancreas progenitor state by the transcriptional regulator Tgif2.
- Published in:
- Nature Communications, 2017, v. 8, n. 2, p. 14127, doi. 10.1038/ncomms14127
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- Publication type:
- Article
seqQscorer: automated quality control of next-generation sequencing data using machine learning.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02294-2
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- Publication type:
- Article
Assessment of computational methods for the analysis of single-cell ATAC-seq data.
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- Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1854-5
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- Publication type:
- Article
Between Interactions and Aggregates: The PolyQ Balance.
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- Genome Biology & Evolution, 2021, v. 13, n. 11, p. 1, doi. 10.1093/gbe/evab246
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- Publication type:
- Article
Glutamine Codon Usage and polyQ Evolution in Primates Depend on the Q Stretch Length.
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- Genome Biology & Evolution, 2018, v. 10, n. 3, p. 816, doi. 10.1093/gbe/evy046
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- Publication type:
- Article
Single-cell specific and interpretable machine learning models for sparse scChIP-seq data imputation.
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- PLoS ONE, 2022, v. 17, n. 7, p. 1, doi. 10.1371/journal.pone.0270043
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- Publication type:
- Article
Detection of features predictive of microRNA targets by integration of network data.
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- PLoS ONE, 2022, v. 17, n. 6, p. 1, doi. 10.1371/journal.pone.0269731
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- Publication type:
- Article
Structured Tandem Repeats in Protein Interactions.
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- International Journal of Molecular Sciences, 2024, v. 25, n. 5, p. 2994, doi. 10.3390/ijms25052994
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- Publication type:
- Article
Selection of Multi-Drug Targets against Drug-Resistant Mycobacterium tuberculosis XDR1219 Using the Hyperbolic Mapping of the Protein Interaction Network.
- Published in:
- International Journal of Molecular Sciences, 2023, v. 24, n. 18, p. 14050, doi. 10.3390/ijms241814050
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- Article
Analysis of Huntington's Disease Modifiers Using the Hyperbolic Mapping of the Protein Interaction Network.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 10, p. 5853, doi. 10.3390/ijms23105853
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- Article
The Role of Low Complexity Regions in Protein Interaction Modes: An Illustration in Huntingtin.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 4, p. 1727, doi. 10.3390/ijms22041727
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- Article
Gene function in early mouse embryonic stem cell differentiation.
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- BMC Genomics, 2007, v. 8, p. 85, doi. 10.1186/1471-2164-8-85
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- Article
A novel approach for protein subcellular location prediction using amino acid exposure.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-342
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- Article
Using cited references to improve the retrieval of related biomedical documents.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-113
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- Publication type:
- Article
LAITOR -- Literature Assistant for Identification ofTerms co-Occurrences and Relationships.
- Published in:
- BMC Bioinformatics, 2010, v. 11, p. 70, doi. 10.1186/1471-2105-11-70
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- Article
Loss of fish actinotrichia proteins and the fin-to-limb transition.
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- Nature, 2010, v. 466, n. 7303, p. 234, doi. 10.1038/nature09137
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- Article
Editorial: Protein Interaction Networks in Health and Disease.
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- Frontiers in Genetics, 2016, p. 1, doi. 10.3389/fgene.2016.00111
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- Article
Correcting for the study bias associated with protein-protein interaction measurements reveals differences between protein degree distributions from different cancer types.
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- Frontiers in Genetics, 2015, p. 1, doi. 10.3389/fgene.2015.00260
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- Article
The Dictionary of Genomics, Transcriptomics, and Proteomics.
- Published in:
- 2009
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- Publication type:
- Book Review
RNA Sequencing of Human Peripheral Blood Cells Indicates Upregulation of Immune-Related Genes in Huntington's Disease.
- Published in:
- Frontiers in Neurology, 2020, v. 11, p. N.PAG, doi. 10.3389/fneur.2020.573560
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- Article
One Step Closer to the Understanding of the Relationship IDR-LCR-Structure.
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- Genes, 2023, v. 14, n. 9, p. 1711, doi. 10.3390/genes14091711
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- Article
Annotation and Analysis of 3902 Odorant Receptor Protein Sequences from 21 Insect Species Provide Insights into the Evolution of Odorant Receptor Gene Families in Solitary and Social Insects.
- Published in:
- Genes, 2022, v. 13, n. 5, p. 919, doi. 10.3390/genes13050919
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- Article
PolyX2: Fast Detection of Homorepeats in Large Protein Datasets.
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- Genes, 2022, v. 13, n. 5, p. 758, doi. 10.3390/genes13050758
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- Article
The Conservation of Low Complexity Regions in Bacterial Proteins Depends on the Pathogenicity of the Strain and Subcellular Location of the Protein.
- Published in:
- Genes, 2021, v. 12, n. 3, p. 451, doi. 10.3390/genes12030451
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- Article
Dynamics of a Protein Interaction Network Associated to the Aggregation of polyQ-Expanded Ataxin-1.
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- Genes, 2020, v. 11, n. 10, p. 1129, doi. 10.3390/genes11101129
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- Article
CRISPR sequences are sometimes erroneously translated and can contaminate public databases with spurious proteins containing spaced repeats.
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- Database: The Journal of Biological Databases & Curation, 2020, v. 2020, p. 1, doi. 10.1093/database/baaa088
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- Article
MIPPIE: the mouse integrated protein–protein interaction reference.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2020, v. 2020, p. 1, doi. 10.1093/database/baaa035
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- Article
Proteome-wide comparison between the amino acid composition of domains and linkers.
- Published in:
- BMC Research Notes, 2018, v. 11, p. 1, doi. 10.1186/s13104-018-3221-0
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- Publication type:
- Article
DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction.
- Published in:
- Nature Genetics, 2009, v. 41, n. 11, p. 1207, doi. 10.1038/ng.463
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- Publication type:
- Article
The features of polyglutamine regions depend on their evolutionary stability.
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- BMC Evolutionary Biology, 2020, v. 20, n. 1, p. 1, doi. 10.1186/s12862-020-01626-3
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- Publication type:
- Article
Identification of Human Proteins That Modify Misfolding and Proteotoxicity of Pathogenic Ataxin-1.
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- PLoS Genetics, 2012, v. 8, n. 8, p. 1, doi. 10.1371/journal.pgen.1002897
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- Article
Disentangling the complexity of low complexity proteins.
- Published in:
- Briefings in Bioinformatics, 2020, v. 21, n. 2, p. 458, doi. 10.1093/bib/bbz007
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- Article
Toward completion of the Earth's proteome: an update a decade later.
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- Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 463, doi. 10.1093/bib/bbx127
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- Article
Evolving research trends in bioinformatics.
- Published in:
- Briefings in Bioinformatics, 2007, v. 8, n. 2, p. 88, doi. 10.1093/bib/bb1035
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- Publication type:
- Article
Amplification of the Gene Ontology annotation of Affymetrix probe sets.
- Published in:
- BMC Bioinformatics, 2006, v. 7, p. 159, doi. 10.1186/1471-2105-7-159
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- Publication type:
- Article
Taxonomic colouring of phylogenetic trees of protein sequences.
- Published in:
- BMC Bioinformatics, 2006, v. 7, p. 79, doi. 10.1186/1471-2105-7-79
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- Publication type:
- Article