Works by Andino, Raul

Results: 47

The role of mutational robustness in RNA virus evolution.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 5, p. 327, doi. 10.1038/nrmicro3003

By:

Lauring, Adam S.;
Frydman, Judith;
Andino, Raul

Publication type:

Article

Mapping Attenuation Determinants in Enterovirus-D68.

Published in:

Viruses (1999-4915), 2020, v. 12, n. 8, p. 867, doi. 10.3390/v12080867

By:

Yeh, Ming Te;
Capponi, Sara;
Catching, Adam;
Bianco, Simone;
Andino, Raul

Publication type:

Article

RNAi puts a lid on virus replication.

Published in:

Nature Biotechnology, 2003, v. 21, n. 6, p. 629, doi. 10.1038/nbt0603-629

By:

Andino, Raul

Publication type:

Article

Targeting Nup358/RanBP2 by a viral protein disrupts stress granule formation.

Published in:

PLoS Pathogens, 2022, v. 18, n. 12, p. 1, doi. 10.1371/journal.ppat.1010598

By:

Sadasivan, Jibin;
Vlok, Marli;
Wang, Xinying;
Nayak, Arabinda;
Andino, Raul;
Jan, Eric

Publication type:

Article

Experimental and mathematical insights on the interactions between poliovirus and a defective interfering genome.

Published in:

PLoS Pathogens, 2021, v. 17, n. 9, p. 1, doi. 10.1371/journal.ppat.1009277

By:

Shirogane, Yuta;
Rousseau, Elsa;
Voznica, Jakub;
Xiao, Yinghong;
Su, Weiheng;
Catching, Adam;
Whitfield, Zachary J.;
Rouzine, Igor M.;
Bianco, Simone;
Andino, Raul

Publication type:

Article

Ethacridine inhibits SARS-CoV-2 by inactivating viral particles.

Published in:

PLoS Pathogens, 2021, v. 17, n. 9, p. 1, doi. 10.1371/journal.ppat.1009898

By:

Li, Xiaoquan;
Lidsky, Peter;
Xiao, Yinghong;
Wu, Chien-Ting;
Garcia-Knight, Miguel;
Yang, Junjiao;
Nakayama, Tsuguhisa;
Nayak, Jayakar V.;
Jackson, Peter K.;
Andino, Raul;
Shu, Xiaokun

Publication type:

Article

Antiviral immunity in Drosophila requires systemic RNA interference spread.

Published in:

2009

By:

Saleh, Maria-Carla;
Tassetto, Michel;
van Rij, Ronald P.;
Goic, Bertsy;
Gausson, Valérie;
Berry, Bassam;
Jacquier, Caroline;
Antoniewski, Christophe;
Andino, Raul

Publication type:

Letter

Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population.

Published in:

Nature, 2006, v. 439, n. 7074, p. 344, doi. 10.1038/nature04388

By:

Vignuzzi, Marco;
Stone, Jeffrey K.;
Arnold, Jamie J.;
Cameron, Craig E.;
Andino, Raul

Publication type:

Article

Is Aging an Inevitable Characteristic of Organic Life or an Evolutionary Adaptation?

Published in:

Biochemistry (00062979), 2022, v. 87, n. 12/13, p. 1413, doi. 10.1134/S0006297922120021

By:

Lidsky, Peter V.;
Yuan, Jing;
Rulison, Jacob M.;
Andino-Pavlovsky, Raul

Publication type:

Article

Polyadenylation of genomic RNA and initiation of antigenomic RNA in a positive-strand RNA virus are controlled by the same cis-element.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 10, p. 2953, doi. 10.1093/nar/gkl349

By:

van Ooij, Mark J. M.;
Polacek, Charlotta;
Glaudemans, Dirk H. R. F.;
Kuijpers, Judith;
van Kuppeveld, Frank J. M.;
Andino, Raul;
Agol, Vadim I.;
Melchers, Willem J. G.

Publication type:

Article

The Picornaviridae Family: Knowledge Gaps, Animal Models, Countermeasures, and Prototype Pathogens.

Published in:

Journal of Infectious Diseases, 2023, v. 228, p. S427, doi. 10.1093/infdis/jiac426

By:

Andino, Raul;
Kirkegaard, Karla;
Macadam, Andrew;
Racaniello, Vincent R;
Rosenfeld, Amy B

Publication type:

Article

Evaluating stability of attenuated Sabin and two novel type 2 oral poliovirus vaccines in children.

Published in:

NPJ Vaccines, 2022, v. 7, n. 1, p. 1, doi. 10.1038/s41541-022-00437-5

By:

Wahid, Rahnuma;
Mercer, Laina;
Gast, Chris;
De Leon, Tirza;
Sáez-Llorens, Xavier;
Fix, Alan;
Macadam, Andrew;
Stephens, Laura;
Chumakov, Konstantin;
Smits, Saskia L.;
Murreddu, Marta;
Konopka-Anstadt, Jennifer L.;
Steven Oberste, M.;
Burns, Cara C.;
Andino, Raul;
Bachtiar, Novilia Sjafri;
Tritama, Erman;
Bandyopadhyay, Ananda S.;
Aguirre, Gabriela;
Rüttimann, Ricardo

Publication type:

Article

Principles of dengue virus evolvability derived from genotype-fitness maps in human and mosquito cells.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.61921

By:

Dolan, Patrick T.;
Taguwa, Shuhei;
Aguilar Rangel, Mauricio;
Acevedo, Ashley;
Hagai, Tzachi;
Andino, Raul;
Frydman, Judith

Publication type:

Article

Viral Determinants of Acute COVID-19 Symptoms in a Nonhospitalized Adult Population in the Pre-Omicron Era.

Published in:

Open Forum Infectious Diseases, 2023, v. 10, n. 8, p. 1, doi. 10.1093/ofid/ofad396

By:

Goldberg, Sarah A;
Lu, Scott;
Garcia-Knight, Miguel;
Davidson, Michelle C;
Tassetto, Michel;
Anglin, Khamal;
Pineda-Ramirez, Jesus;
Chen, Jessica Y;
Rugart, Paulina R;
Mathur, Sujata;
Forman, Carrie A;
Donohue, Kevin C;
Abedi, Glen R;
Saydah, Sharon;
Briggs-Hagen, Melissa;
Midgley, Claire M;
Andino, Raul;
Peluso, Michael J;
Glidden, David V;
Martin, Jeffrey N

Publication type:

Article

High Level of Pretreatment and Acquired Human Immunodeficiency Virus Drug Resistance in El Salvador: A Nationally Representative Survey, 2018–2019.

Published in:

Open Forum Infectious Diseases, 2022, v. 9, n. 11, p. 1, doi. 10.1093/ofid/ofac580

By:

Girón-Callejas, Amalia;
García-Morales, Claudia;
Mendizabal-Burastero, Ricardo;
Quezada, Alma;
Ruiz, Lisette;
Arguera, Nelly;
Sorto, Salvador;
Nieto, Ana I;
Tapia-Trejo, Daniela;
López-Sánchez, Dulce M;
Pérez-García, Marissa;
Cruz, Luis;
Andino, Raúl;
Sajquim, Edgar;
Juárez, Sandra I;
Farach, Nasim;
Ravasi, Giovanni;
Northbrook, Sanny;
Reyes-Terán, Gustavo;
Ávila-Ríos, Santiago

Publication type:

Article

The broad-spectrum antiviral ribonucleoside ribavirin is an RNA virus mutagen.

Published in:

Nature Medicine, 2000, v. 6, n. 12, p. 1375, doi. 10.1038/82191

By:

Crotty, Shane;
Maag, David;
Arnold, Jamie J.;
Zhong, Weidong;
Lau, Johnson Y. N.;
Hong, Zhi;
Andino, Raul;
Cameron, Craig E.

Publication type:

Article

Rapid Evolution of Virus Sequences in Intrinsically Disordered Protein Regions.

Published in:

PLoS Pathogens, 2014, v. 10, n. 12, p. 1, doi. 10.1371/journal.ppat.1004529

By:

Gitlin, Leonid;
Hagai, Tzachi;
LaBarbera, Anthony;
Solovey, Mark;
Andino, Raul

Publication type:

Article

Identification and Manipulation of the Molecular Determinants Influencing Poliovirus Recombination.

Published in:

PLoS Pathogens, 2013, v. 9, n. 2, p. 1, doi. 10.1371/journal.ppat.1003164

By:

Runckel, Charles;
Westesson, Oscar;
Andino, Raul;
DeRisi, Joseph L.

Publication type:

Article

Quasispecies Theory and the Behavior of RNA Viruses.

Published in:

PLoS Pathogens, 2010, v. 6, n. 7, p. 1, doi. 10.1371/journal.ppat.1001005

By:

Lauring, Adam S.;
Andino, Raul

Publication type:

Article

An RNA Element at the 5'-End of the Poliovirus Genome Functions as a General Promoter for RNA Synthesis.

Published in:

PLoS Pathogens, 2010, v. 6, n. 6, p. 1, doi. 10.1371/journal.ppat.1000936

By:

Vogt, Dorothee A.;
Andino, Raul

Publication type:

Article

Ribavirin's antiviral mechanism of action: lethal mutagenesis?

Published in:

Journal of Molecular Medicine, 2002, v. 80, n. 2, p. 86, doi. 10.1007/s00109-001-0308-0

By:

Crotty, Shane;
Cameron, Craig;
Andino, Raul

Publication type:

Article

Poliovirus intrahost evolution is required to overcome tissue-specific innate immune responses.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00354-5

By:

Yinghong Xiao;
Dolan, Patrick Timothy;
Goldstein, Elizabeth Faul;
Min Li;
Farkov, Mikhail;
Brodsky, Leonid;
Andino, Raul

Publication type:

Article

StralSV: assessment of sequence variability within similar 3D structures and application to polio RNA-dependent RNA polymerase.

Published in:

BMC Bioinformatics, 2011, v. 12, n. 1, p. 226, doi. 10.1186/1471-2105-12-226

By:

Zemla, Adam T.;
Lang, Dorothy M.;
Kostova, Tanya;
Andino, Raul;
Ecale Zhou, Carol L.

Publication type:

Article

Hsp90 shapes protein and RNA evolution to balance trade-offs between protein stability and aggregation.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04203-x

By:

Geller, Ron;
Pechmann, Sebastian;
Acevedo, Ashley;
Andino, Raul;
Frydman, Judith

Publication type:

Article

Engineering attenuated virus vaccines by controlling replication fidelity.

Published in:

Nature Medicine, 2008, v. 14, n. 2, p. 154, doi. 10.1038/nm1726

By:

Vignuzzi, Marco;
Wendt, Emily;
Andino, Raul

Publication type:

Article

Neutralizing Immunity Induced Against the Omicron BA.1 and BA.2 Variants in Vaccine Breakthrough Infections.

Published in:

2022

By:

Brazer, Noah;
Morris, Mary Kate;
Servellita, Venice;
Anglin, Khamal;
Saldhi, Prachi;
Garcia-Knight, Miguel;
Bethancourt, Sutana;
Sotomayor-Gonzalez, Alicia;
Wang, Baolin;
Foresythe, Abiodun;
Nguyen, Jenny;
Gliwa, Amelia S;
Pineda-Ramirez, Jesus;
Sanchez, Ruth Diaz;
Zhang, Yueyuan;
Ott, Melanie;
Wadford, Debra A;
Andino, Raul;
Kelly, J Daniel;
Hanson, Carl

Publication type:

journal article

SARS-CoV-2 Nsp1 cooperates with initiation factors EIF1 and 1A to selectively enhance translation of viral RNA.

Published in:

PLoS Pathogens, 2024, v. 20, n. 2, p. 1, doi. 10.1371/journal.ppat.1011535

By:

Aviner, Ranen;
Lidsky, Peter V.;
Xiao, Yinghong;
Tassetto, Michel;
Kim, Damian;
Zhang, Lichao;
McAlpine, Patrick L.;
Elias, Joshua;
Frydman, Judith;
Andino, Raul

Publication type:

Article

Cricket paralysis virus antagonizes Argonaute 2 to modulate antiviral defense in Drosophila.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 5, p. 547, doi. 10.1038/nsmb.1810

By:

Nayak, Arabinda;
Berry, Bassam;
Tassetto, Michel;
Kunitomi, Mark;
Acevedo, Ashley;
Deng, Changhui;
Krutchinsky, Andrew;
Gross, John;
Antoniewski, Christophe;
Andino, Raul

Publication type:

Article

corrigendum: Short interfering RNA confers intracellular antiviral immunity in human cells.

Published in:

2003

By:

Gitlin, Leonid;
Karelsky, Sveta;
Andino, Raul

Publication type:

Correction Notice

Short interfering RNA confers intracellular antiviral immunity in human cells.

Published in:

Nature, 2002, v. 418, n. 6896, p. 430, doi. 10.1038/nature00873

By:

Gitlin, Leonid;
Karelsky, Sveta;
Andino, Raul

Publication type:

Article

Cytotoxic T-cell immunity to virus-infected non-haematopoietic cells requires presentation of exogenous antigen.

Published in:

Nature, 1999, v. 402, n. 6763, p. 25, doi. 10.1038/35005528

By:

Sigal, Luis J.;
Crotty, Shane;
Andino, Raul;
Rock, Kenneth L.

Publication type:

Article

Cytotoxic T-cell immunity to virus-infected non-haematopoietic cells requires presentation of exogenous antigen.

Published in:

Nature, 1999, v. 398, n. 6722, p. 77, doi. 10.1038/18038

By:

Sigal, Luis J.;
Crotty, Shane;
Andino, Raul;
Rock, Kenneth L.

Publication type:

Article

Detection of Higher Cycle Threshold Values in Culturable SARS-CoV-2 Omicron BA.1 Sublineage Compared with Pre-Omicron Variant Specimens - San Francisco Bay Area, California, July 2021-March 2022.

Published in:

MMWR: Morbidity & Mortality Weekly Report, 2022, v. 71, n. 36, p. 1151, doi. 10.15585/mmwr.mm7136a3

By:

Tassetto, Michel;
Garcia-Knight, Miguel;
Anglin, Khamal;
Lu, Scott;
Zhang, Amethyst;
Romero, Mariela;
Pineda-Ramirez, Jesus;
Sanchez, Ruth Diaz;
Donohue, Kevin C.;
Pfister, Karen;
Chan, Curtis;
Saydah, Sharon;
Briggs-Hagen, Melissa;
Peluso, Michael J.;
Martin, Jeffrey N.;
Andino, Raul;
Midgley, Claire M.;
Kelly, J. Daniel

Publication type:

Article

Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization.

Published in:

NPJ Vaccines, 2020, v. 5, n. 1, p. 1, doi. 10.1038/s41541-020-0176-7

By:

Konopka-Anstadt, Jennifer L.;
Campagnoli, Ray;
Vincent, Annelet;
Shaw, Jing;
Wei, Ling;
Wynn, Nhien T.;
Smithee, Shane E.;
Bujaki, Erika;
Te Yeh, Ming;
Laassri, Majid;
Zagorodnyaya, Tatiana;
Weiner, Amy J.;
Chumakov, Konstantin;
Andino, Raul;
Macadam, Andrew;
Kew, Olen;
Burns, Cara C.

Publication type:

Article

Metagenomic sequencing of stool samples in Bangladeshi infants: virome association with poliovirus shedding after oral poliovirus vaccination.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-71791-4

By:

Tan, Susanna K.;
Granados, Andrea C.;
Bouquet, Jerome;
Hoy-Schulz, Yana Emmy;
Green, Lauri;
Federman, Scot;
Stryke, Doug;
Haggerty, Thomas D.;
Ley, Catherine;
Yeh, Ming-Te;
Jannat, Kaniz;
Maldonado, Yvonne A.;
Andino, Raul;
Parsonnet, Julie;
Chiu, Charles Y.

Publication type:

Article

The endocytic pathway mediates cell entry of dsRNA to induce RNAi silencing.

Published in:

Nature Cell Biology, 2006, v. 8, n. 8, p. 793, doi. 10.1038/ncb1439

By:

Saleh, Maria-Carla;
van Rij, Ronald P.;
Hekele, Armin;
Gillis, Amethyst;
Foley, Edan;
O'Farrell, Patrick H.;
Andino, Raul

Publication type:

Article

Incidence of Severe COVID-19 Illness Following Vaccination and Booster With BNT162b2, mRNA-1273, and Ad26.COV2.S Vaccines.

Published in:

JAMA: Journal of the American Medical Association, 2022, v. 328, n. 14, p. 1427, doi. 10.1001/jama.2022.17985

By:

Kelly, J. Daniel;
Leonard, Samuel;
Hoggatt, Katherine J.;
Boscardin, W. John;
Lum, Emily N.;
Moss-Vazquez, Tristan A.;
Andino, Raul;
Wong, Joseph K.;
Byers, Amy;
Bravata, Dawn M.;
Tien, Phyllis C.;
Keyhani, Salomeh

Publication type:

Article

Library preparation for highly accurate population sequencing of RNA viruses.

Published in:

Nature Protocols, 2014, v. 9, n. 7, p. 1760, doi. 10.1038/nprot.2014.118

By:

Acevedo, Ashley;
Andino, Raul

Publication type:

Article

Non-Specific dsRNA-Mediated Antiviral Response in the Honey Bee.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0077263

By:

Flenniken, Michelle L.;
Andino, Raul

Publication type:

Article

Hsp90 Inhibitors Exhibit Resistance-Free Antiviral Activity against Respiratory Syncytial Virus.

Published in:

PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0056762

By:

Geller, Ron;
Andino, Raul;
Frydman, Judith

Publication type:

Article

Temporal Analysis of the Honey Bee Microbiome Reveals Four Novel Viruses and Seasonal Prevalence of Known Viruses, Nosema, and Crithidia.

Published in:

PLoS ONE, 2011, v. 6, n. 6, p. 1, doi. 10.1371/journal.pone.0020656

By:

Runckel, Charles;
Flenniken, Michelle L.;
Engel, Juan C.;
Ruby, J. Graham;
Ganem, Donald;
Andino, Raul;
DeRisi, Joseph L.

Publication type:

Article

An Enhanced Single Base Extension Technique for the Analysis of Complex Viral Populations.

Published in:

PLoS ONE, 2009, v. 4, n. 10, p. 1, doi. 10.1371/journal.pone.0007453

By:

Webster, Dale R.;
Hekele, Armin G.;
Lauring, Adam S.;
Fischer, Kael F.;
Hao Li;
Andino, Raul;
DeRisi, Joseph L.

Publication type:

Article

Mutational and fitness landscapes of an RNA virus revealed through population sequencing.

Published in:

Nature, 2014, v. 505, n. 7485, p. 686, doi. 10.1038/nature12861

By:

Acevedo, Ashley;
Brodsky, Leonid;
Andino, Raul

Publication type:

Article

Experimentally guided models reveal replication principles that shape the mutation distribution of RNA viruses.

Published in:

eLife, 2015, p. 1, doi. 10.7554/eLife.03753.001

By:

Schulte, Michael B.;
Draghi, Jeremy A.;
Plotkin, Joshua B.;
Andino, Raul

Publication type:

Article

Examining the interplay between face mask usage, asymptomatic transmission, and social distancing on the spread of COVID-19.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-94960-5

By:

Catching, Adam;
Capponi, Sara;
Yeh, Ming Te;
Bianco, Simone;
Andino, Raul

Publication type:

Article

Rationalizing the development of live attenuated virus vaccines.

Published in:

Nature Biotechnology, 2010, v. 28, n. 6, p. 573, doi. 10.1038/nbt.1635

By:

Lauring, Adam S.;
Jones, Jeremy O.;
Andino, Raul

Publication type:

Article

The Dengue Virus NS5 Protein Intrudes in the Cellular Spliceosome and Modulates Splicing.

Published in:

PLoS Pathogens, 2016, v. 12, n. 8, p. 1, doi. 10.1371/journal.ppat.1005841

By:

De Maio, Federico A.;
Risso, Guillermo;
Iglesias, Nestor G.;
Shah, Priya;
Pozzi, Berta;
Gebhard, Leopoldo G.;
Mammi, Pablo;
Mancini, Estefania;
Yanovsky, Marcelo J.;
Andino, Raul;
Krogan, Nevan;
Srebrow, Anabella;
Gamarnik, Andrea V.

Publication type:

Article