Works by Amgarten, Deyvid

Results: 18

Detection of Hepatitis E Virus Genotype 3 in Feces of Capybaras (Hydrochoeris hydrochaeris) in Brazil.

Published in:

Viruses (1999-4915), 2023, v. 15, n. 2, p. 335, doi. 10.3390/v15020335

By:

Cunha, Lia;
Luchs, Adriana;
Azevedo, Lais S.;
Silva, Vanessa C. M.;
Lemos, Marcilio F.;
Costa, Antonio C.;
Compri, Adriana P.;
França, Yasmin;
Viana, Ellen;
Malta, Fernanda;
Medeiros, Roberta S.;
Guiducci, Raquel;
Morillo, Simone G.;
Gomes-Gouvea, Michele S.;
Amgarten, Deyvid;
Pinho, João R. R.;
Moreira, Regina C.

Publication type:

Article

Publisher Correction: Discovery and description of novel phage genomes from urban microbiomes sampled by the MetaSUB consortium.

Published in:

2024

By:

Flores, Vinicius S.;
Amgarten, Deyvid E.;
Iha, Bruno Koshin Vázquez;
Ryon, Krista A.;
Danko, David;
Tierney, Braden T.;
Mason, Christopher;
da Silva, Aline Maria;
Setubal, João Carlos

Publication type:

Correction Notice

Discovery and description of novel phage genomes from urban microbiomes sampled by the MetaSUB consortium.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-58226-0

By:

Flores, Vinicius S.;
Amgarten, Deyvid E.;
Iha, Bruno Koshin Vázquez;
Ryon, Krista A.;
Danko, David;
Tierney, Braden T.;
Mason, Christopher;
da Silva, Aline Maria;
Setubal, João Carlos

Publication type:

Article

Discovery and description of novel phage genomes from urban microbiomes sampled by the MetaSUB consortium.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-58226-0

By:

Flores, Vinicius S.;
Amgarten, Deyvid E.;
Iha, Bruno Koshin Vázquez;
Ryon, Krista A.;
Danko, David;
Tierney, Braden T.;
Mason, Christopher;
da Silva, Aline Maria;
Setubal, João Carlos

Publication type:

Article

Effectiveness of Heterologous Coronavirus Disease 2019 (COVID-19) Vaccine Booster Dosing in Brazilian Healthcare Workers, 2021.

Published in:

Clinical Infectious Diseases, 2023, v. 76, n. 3, p. e360, doi. 10.1093/cid/ciac430

By:

Marra, Alexandre R;
Miraglia, João Luiz;
Malheiros, Daniel Tavares;
Guozhang, Yang;
Teich, Vanessa Damazio;
Victor, Elivane da Silva;
Pinho, João Renato Rebello;
Cypriano, Adriana;
Vieira, Laura Wanderly;
Polonio, Miria;
Ornelas, Rafael Herrera;
Oliveira, Solange Miranda de;
Junior, Flavio Araujo Borges;
Oler, Silvia Cristina Cassiano;
Schettino, Guilherme de Paula Pinto;
Oliveira, Ketti Gleyzer de;
Santana, Rúbia Anita Ferraz;
Malta, Fernanda de Mello;
Amgarten, Deyvid;
Boechat, Ana Laura

Publication type:

Article

Nucleocapsid single point-mutation associated with drop-out on RT-PCR assay for SARS-CoV-2 detection.

Published in:

2023

By:

de Mello Malta, Fernanda;
Amgarten, Deyvid;
Marra, Alexandre Rodrigues;
Petroni, Roberta Cardoso;
da Silva Nali, Luiz Henrique;
Siqueira, Ricardo Andreotti;
Neto, Miguel Cendoroglo;
Oler, Silvia Cassiano;
Pinho, João Renato Rebello

Publication type:

Case Study

Immune Evasion of SARS-CoV-2 Omicron Subvariants XBB.1.5, XBB.1.16 and EG.5.1 in a Cohort of Older Adults after ChAdOx1-S Vaccination and BA.4/5 Bivalent Booster.

Published in:

Vaccines, 2024, v. 12, n. 2, p. 144, doi. 10.3390/vaccines12020144

By:

Machado, Rafael Rahal Guaragna;
Candido, Érika Donizetti;
Aguiar, Andressa Simoes;
Chalup, Vanessa Nascimento;
Sanches, Patricia Romão;
Dorlass, Erick Gustavo;
Amgarten, Deyvid Emanuel;
Pinho, João Renato Rebello;
Durigon, Edison Luiz;
Oliveira, Danielle Bruna Leal

Publication type:

Article

Novel virocell metabolic potential revealed in agricultural soils by virus‐enriched soil metagenome analysis.

Published in:

Environmental Microbiology Reports, 2021, v. 13, n. 3, p. 348, doi. 10.1111/1758-2229.12939

By:

Braga, Lucas P. P.;
Coutinho, Felipe H.;
Amgarten, Deyvid E.;
Kot, Witold;
Hansen, Lars;
Setubal, João C.;
Philippot, Laurent

Publication type:

Article

A Comprehensive Molecular and Serological Investigation of Hepatitis A Virus Among Patients With Suspected Acute Hepatitis: A Brazilian Study.

Published in:

Journal of Medical Virology, 2025, v. 97, n. 6, p. 1, doi. 10.1002/jmv.70449

By:

de Oliveira, Ketty Gleyzer;
Vasconcelos, Mariana Pinheiro Alves;
Ton, Julia Teixeira;
Uehara, Silvia Naomi de Oliveira;
Sitnik, Roberta;
Ornelas Pereira Salvador de Oliveira, Denize;
Castberg, Layze;
Siqueira, Ricardo Andreotti;
Robinson, Peter James;
Domingues, Thaís Senna de Paula;
Panico, Caroline Thomas;
Inoue, César Augusto;
Maluf, Maira Marranghello;
de Mello Malta, Fernanda;
Amgarten, Deyvid;
Dorlass, Erick;
Sebe, Pedro;
Pinto, Arlene S.;
Lobato, Cirley M. D. O.;
Ferreira, Adalgisa

Publication type:

Article

Acute Hepatitis Related to Hepatitis E Virus Genotype 3f Infection in Brazil.

Published in:

Journal of Medical Virology, 2024, v. 96, n. 11, p. 1, doi. 10.1002/jmv.70024

By:

Ribeiro, Leidiane B.;
Reche, Luciana A.;
Nastri, Ana C. de Seixas Santos;
Malta, Fernanda de Mello;
Amgarten, Deyvid E.;
Casadio, Luciana V. B.;
Gonzalez, Mario P.;
Ono, Suzane K.;
Mendes‐Correa, Maria C.;
Carrilho, Flair J.;
Pinho, João R. R.;
Gomes‐Gouvêa, Michele S.

Publication type:

Article

Evidence of reassortment of avian influenza A (H2) viruses in Brazilian shorebirds.

Published in:

PLoS ONE, 2024, v. 19, n. 5, p. 1, doi. 10.1371/journal.pone.0300862

By:

Thomazelli, Luciano M.;
Pinho, João Renato Rebello;
Dorlass, Erick G.;
Ometto, Tatiana;
Meneguin, Carla;
Paludo, Danielle;
Frias, Rodolfo Teixeira;
Mancini, Patricia Luciano;
Monteiro, Cairo;
Aicher, Sophie Marie;
Walker, David;
Scagion, Guilherme P.;
Krauss, Scott;
Fabrizio, Thomas;
Petry, Maria Virgínia;
Scherer, Angelo L.;
Scherer, Janete;
Serafini, Patricia P.;
Neto, Isaac S.;
Amgarten, Deyvid Emanuel

Publication type:

Article

Mass molecular testing for COVID19 using NGS-based technology and a highly scalable workflow.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-86498-3

By:

de Mello Malta, Fernanda;
Amgarten, Deyvid;
Val, Felipe Camilo;
Cervato, Murilo Castro;
de Azevedo, Bruna Mascaro Cordeiro;
de Souza Basqueira, Marcela;
dos Santos Alves, Camila Oliveira;
Nobrega, Maria Soares;
de Souza Reis, Rodrigo;
Sebe, Pedro;
Gretschischkin, Michel Chieregato;
de Oliveira, Diego Delgado Colombo;
Nakamura, Carolina Naomi Izo;
Chazanas, Pedro Lui Nigro;
Pinho, João Renato Rebello

Publication type:

Article

Updating the Phylodynamics of Yellow Fever Virus 2016–2019 Brazilian Outbreak With New 2018 and 2019 São Paulo Genomes.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.811318

By:

Moreira Salles, Ana Paula;
de Seixas Santos Nastri, Ana Catharina;
Ho, Yeh-Li;
Vilas Boas Casadio, Luciana;
Emanuel Amgarten, Deyvid;
Justo Arévalo, Santiago;
Soares Gomes-Gouvea, Michele;
Jose Carrilho, Flair;
de Mello Malta, Fernanda;
Rebello Pinho, João Renato

Publication type:

Article

Incursion of Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus, Brazil, 2023.

Published in:

Emerging Infectious Diseases, 2024, v. 30, n. 3, p. 619, doi. 10.3201/eid3003.231157

By:

Carvalho de Araújo, Andreina;
Nascimento Silva, Laura Morais;
Yong Cho, Andrew;
Repenning, Márcio;
Amgarten, Deyvid;
de Moraes, Ana Paula;
Malta, Fernanda;
Miller, Michael;
Dorlass, Erick G.;
Palameta, Soledad;
Oliveira, Daniele Bruna L.;
de Araújo, Jansen;
Arns, Clarice Weis;
Durigon, Edison L.;
Pinho, João Renato R.;
Dong-Hun Lee;
Lage Ferreira, Helena

Publication type:

Article

Sabiá Virus-Like Mammarenavirus in Patient with Fatal Hemorrhagic Fever, Brazil, 2020.

Published in:

2020

By:

de Mello Malta, Fernanda;
Amgarten, Deyvid;
de Seixas Santos Nastri, Ana Catharina;
Yeh-Li Ho;
Boas Casadio, Luciana Vilas;
Basqueira, Marcela;
Selegatto, Gloria;
Castro Cervato, Murilo;
Nunes Duarte-Neto, Amaro;
Higashino, Hermes Ryoiti;
Faustino Medeiros, Felipe Arthur;
Luiz Pinto, José;
Gendler, Lima;
Levin, Anna S.;
Rebello Pinho, João Renato;
Nastri, Ana Catharina de Seixas Santos;
Ho, Yeh-Li;
Cervato, Murilo Castro;
Duarte-Neto, Amaro Nunes;
Gendler, José Luiz Pinto Lima

Publication type:

journal article

Mortality in sea lions is associated with the introduction of the H5N1 clade 2.3.4.4b virus in Brazil October 2023: whole genome sequencing and phylogenetic analysis.

Published in:

BMC Veterinary Research, 2024, v. 20, n. 1, p. 1, doi. 10.1186/s12917-024-04137-1

By:

de Carvalho Araujo, Andreina;
Cho, Andrew Yong;
Silva, Laura Morais Nascimento;
Corrêa, Thais Camilo;
de Souza, Gabriela Cristini;
Albuquerque, Adriana Silva;
Macagnan, Eduardo;
Kolesnikvoas, Cristiane K. M.;
Meurer, Rafael;
Vieira, Jenyffer Vierheller;
Lemos, Giulia Gaglianone;
Barreto, André Silva;
Dick, Jeferson Luis;
Groch, Karina Rejane;
de Castilho, Pedro Volkmer;
Amgarten, Deyvid;
Malta, Fernanda;
Miller, Michael;
Dorlass, Erick G.;
Palameta, Soledad

Publication type:

Article

Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages.

Published in:

BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3729-z

By:

Amgarten, Deyvid;
Farage Martins, Layla;
Lombardi, Karen Cristina;
Principal Antunes, Luciana;
Silva de Souza, Ana Paula;
Gonçalves Nicastro, Gianlucca;
Watanabe Kitajima, Elliott;
Bento Quaggio, Ronaldo;
Upton, Chris;
Setubal, João Carlos;
da Silva, Aline Maria

Publication type:

Article

MARVEL, a Tool for Prediction of Bacteriophage Sequences in Metagenomic Bins.

Published in:

Frontiers in Genetics, 2018, p. N.PAG, doi. 10.3389/fgene.2018.00304

By:

Amgarten, Deyvid;
Braga, Lucas P. P.;
da Silva, Aline M.;
Setubal, João C.

Publication type:

Article