Works by Amaro, Rommie E.
1
- ChemBioChem, 2021, v. 22, n. 3, p. 565, doi. 10.1002/cbic.202000517
- Martin, Bryan T.;
- Malmstrom, Robert D.;
- Amaro, Rommie E.;
- Wüthrich, Kurt
- Article
2
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-50976-9
- Nuqui, Xandra;
- Casalino, Lorenzo;
- Zhou, Ling;
- Shehata, Mohamed;
- Wang, Albert;
- Tse, Alexandra L.;
- Ojha, Anupam A.;
- Kearns, Fiona L.;
- Rosenfeld, Mia A.;
- Miller, Emily Happy;
- Acreman, Cory M.;
- Ahn, Surl-Hee;
- Chandran, Kartik;
- McLellan, Jason S.;
- Amaro, Rommie E.
- Article
3
- Viruses (1999-4915), 2021, v. 13, n. 4, p. 663, doi. 10.3390/v13040663
- Tang, Heng;
- Demir, Özlem;
- Kurniawan, Fredy;
- Brown, William L.;
- Shi, Ke;
- Moeller, Nicholas H.;
- Carpenter, Michael A.;
- Belica, Christopher;
- Orellana, Kayo;
- Du, Guocheng;
- LeBeau, Aaron M.;
- Amaro, Rommie E.;
- Harris, Reuben S.;
- Aihara, Hideki;
- Chelico, Linda
- Article
4
- WIREs: Computational Molecular Science, 2023, v. 13, n. 3, p. 1, doi. 10.1002/wcms.1649
- Muñiz‐Chicharro, Abraham;
- Votapka, Lane W.;
- Amaro, Rommie E.;
- Wade, Rebecca C.
- Article
5
- Genes, 2017, v. 8, n. 6, p. 166, doi. 10.3390/genes8060166
- Cheng, Kevin J.;
- Demir, Özlem;
- Amaro, Rommie E.
- Article
6
- Journal of Computer-Aided Molecular Design, 2019, v. 33, n. 1, p. 1, doi. 10.1007/s10822-018-0180-4
- Gaieb, Zied;
- Parks, Conor D.;
- Chiu, Michael;
- Yang, Huanwang;
- Shao, Chenghua;
- Walters, W. Patrick;
- Lambert, Millard H.;
- Nevins, Neysa;
- Bembenek, Scott D.;
- Ameriks, Michael K.;
- Mirzadegan, Tara;
- Burley, Stephen K.;
- Amaro, Rommie E.;
- Gilson, Michael K.
- Article
7
- Journal of Computer-Aided Molecular Design, 2018, v. 32, n. 1, p. 1, doi. 10.1007/s10822-017-0088-4
- Gaieb, Zied;
- Liu, Shuai;
- Gathiaka, Symon;
- Chiu, Michael;
- Yang, Huanwang;
- Shao, Chenghua;
- Feher, Victoria A.;
- Walters, W. Patrick;
- Kuhn, Bernd;
- Rudolph, Markus G.;
- Burley, Stephen K.;
- Gilson, Michael K.;
- Amaro, Rommie E.
- Article
8
- Journal of Computer-Aided Molecular Design, 2008, v. 22, n. 9, p. 693, doi. 10.1007/s10822-007-9159-2
- Amaro, Rommie E.;
- Baron, Riccardo;
- McCammon, J. Andrew
- Article
9
- eLife, 2021, p. 1, doi. 10.7554/eLife.64691
- Rathinaswamy, Manoj K.;
- Gaieb, Zied;
- Fleming, Kaelin D.;
- Borsari, Chiara;
- Harris, Noah J.;
- Moeller, Brandon E.;
- Wymann, Matthias P.;
- Amaro, Rommie E.;
- Burke, John E.
- Article
10
- Bioinformatics, 2013, v. 29, n. 3, p. 393, doi. 10.1093/bioinformatics/bts689
- Votapka, Lane;
- Amaro, Rommie E.
- Article
11
- eLife, 2025, p. 1, doi. 10.7554/eLife.97313
- F. Oliveira, A. Sofia;
- Kearns, Fiona L.;
- Rosenfeld, Mia A.;
- Casalino, Lorenzo;
- Tulli, Lorenzo;
- Berger, Imre;
- Schaffitzel, Christiane;
- Davidson, Andrew D.;
- Amaro, Rommie E.;
- Mulholland, Adrian J.
- Article
12
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41756-y
- Chongsaritsinsuk, Joann;
- Steigmeyer, Alexandra D.;
- Mahoney, Keira E.;
- Rosenfeld, Mia A.;
- Lucas, Taryn M.;
- Smith, Courtney M.;
- Li, Alice;
- Ince, Deniz;
- Kearns, Fiona L.;
- Battison, Alexandria S.;
- Hollenhorst, Marie A.;
- Judy Shon, D.;
- Tiemeyer, Katherine H.;
- Attah, Victor;
- Kwon, Catherine;
- Bertozzi, Carolyn R.;
- Ferracane, Michael J.;
- Lemmon, Mark A.;
- Amaro, Rommie E.;
- Malaker, Stacy A.
- Article
13
- 2015
- Boras, Britton W.;
- Hirakis, Sophia P.;
- Votapka, Lane W.;
- Malmstrom, Robert D.;
- Amaro, Rommie E.;
- McCulloch, Andrew D.;
- Bhattacharya, Supriyo;
- Stasiak, Andrzej
- Case Study
14
- PLoS Neglected Tropical Diseases, 2010, v. 4, n. 8, p. 1, doi. 10.1371/journal.pntd.0000803
- Durrant, Jacob D.;
- Hall, Laurence;
- Swift, Robert V.;
- Landon, Melissa;
- Schnaufer, Achim;
- Amaro, Rommie E.
- Article
15
- PLoS Neglected Tropical Diseases, 2010, v. 4, n. 8, p. 1, doi. 10.1371/journal.pntd.0000803
- Durrant, Jacob D.;
- Hall, Laurence;
- Swift, Robert V.;
- Landon, Melissa;
- Schnaufer, Achim;
- Rommie E. Amaro
- Article
16
- Molecular & Cellular Biology, 2018, v. 38, n. 23, p. 1, doi. 10.1128/MCB.00356-18
- Salamango, Daniel J.;
- Becker, Jordan T.;
- McCann, Jennifer L.;
- Cheng, Adam Z.;
- Demir, Özlem;
- Amaro, Rommie E.;
- Brown, William L.;
- Shaban, Nadine M.;
- Harris, Reuben S.
- Article
17
- Biomolecules (2218-273X), 2024, v. 14, n. 8, p. 967, doi. 10.3390/biom14080967
- Fallatah, Maryam M. Jebril;
- Demir, Özlem;
- Law, Fiona;
- Lauinger, Linda;
- Baronio, Roberta;
- Hall, Linda;
- Bournique, Elodie;
- Srivastava, Ambuj;
- Metzen, Landon Tyler;
- Norman, Zane;
- Buisson, Rémi;
- Amaro, Rommie E.;
- Kaiser, Peter
- Article
18
- Biomolecules (2218-273X), 2022, v. 12, n. 2, p. 183, doi. 10.3390/biom12020183
- Oliveira, Aline A.;
- Róg, Tomasz;
- da Silva, Albérico B. F.;
- Amaro, Rommie E.;
- Johnson, Mark S.;
- Postila, Pekka A.
- Article
19
- Biomolecules (2218-273X), 2021, v. 11, n. 1, p. 76, doi. 10.3390/biom11010076
- Lirussi, Lisa;
- Demir, Özlem;
- You, Panpan;
- Sarno, Antonio;
- Amaro, Rommie E.;
- Nilsen, Hilde
- Article
20
- Nature Communications, 2015, v. 6, n. 7, p. 7588, doi. 10.1038/ncomms8588
- Malmstrom, Robert D.;
- Kornev, Alexandr P.;
- Taylor, Susan S.;
- Amaro, Rommie E.
- Article
21
- Nature Communications, 2013, v. 4, n. 1, p. 1407, doi. 10.1038/ncomms2361
- Wassman, Christopher D.;
- Baronio, Roberta;
- Demir, Özlem;
- Wallentine, Brad D.;
- Chen, Chiung-Kuang;
- Hall, Linda V.;
- Salehi, Faezeh;
- Lin, Da-Wei;
- Chung, Benjamin P.;
- Wesley Hatfield, G.;
- Richard Chamberlin, A.;
- Luecke, Hartmut;
- Lathrop, Richard H.;
- Kaiser, Peter;
- Amaro, Rommie E.
- Article
22
- BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-159
- Durrant, Jacob D.;
- Amaro, Rommie E.
- Article
23
- PLoS Pathogens, 2024, v. 20, n. 11, p. 1, doi. 10.1371/journal.ppat.1012704
- Tse, Alexandra L.;
- Acreman, Cory M.;
- Ricardo-Lax, Inna;
- Berrigan, Jacob;
- Lasso, Gorka;
- Balogun, Toheeb;
- Kearns, Fiona L.;
- Casalino, Lorenzo;
- McClain, Georgia L.;
- Chandran, Amartya Mudry;
- Lemeunier, Charlotte;
- Amaro, Rommie E.;
- Rice, Charles M.;
- Jangra, Rohit K.;
- McLellan, Jason S.;
- Chandran, Kartik;
- Miller, Emily Happy
- Article
24
- PLoS Computational Biology, 2015, v. 11, n. 10, p. 1, doi. 10.1371/journal.pcbi.1004381
- Votapka, Lane W.;
- Amaro, Rommie E.
- Article
25
- PLoS Computational Biology, 2014, v. 10, n. 7, p. 1, doi. 10.1371/journal.pcbi.1003720
- Durrant, Jacob D.;
- Amaro, Rommie E.
- Article
26
- PLoS Computational Biology, 2011, v. 7, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002238
- Demir, Özlem;
- Baronio, Roberta;
- Salehi, Faezeh;
- Wassman, Christopher D.;
- Hall, Linda;
- Hatfield, G. Wesley;
- Chamberlin, Richard;
- Kaiser, Peter;
- Lathrop, Richard H.;
- Amaro, Rommie E.
- Article
27
- PLoS Computational Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1371/journal.pcbi.1000648
- Durrant, Jacob D.;
- Amaro, Rommie E.;
- Lei Xie;
- Urbaniak, Michael D.;
- Ferguson, Michael A. J.;
- Haapalainen, Antti;
- Zhijun Chen;
- Di Guilmi, Anne Marie;
- Wunder, Frank;
- Bourne, Philip E.;
- McCammon, J. Andrew
- Article
28
- Nucleic Acids Research, 2016, v. 44, n. 22, p. 10862, doi. 10.1093/nar/gkw917
- Rajappa-Titu, Lional;
- Takuma Suematsu;
- Munoz-Tello, Paola;
- Long, Marius;
- Demir, Özlem;
- Cheng, Kevin J.;
- Stagno, Jason R.;
- Luecke, Hartmut;
- Amaro, Rommie E.;
- Aphasizheva, Inna;
- Aphasizhev, Ruslan;
- Thore, Stéphane
- Article
29
- Nucleic Acids Research, 2016, v. 44, n. 3, p. 1, doi. 10.1093/nar/gkv938
- Zimmermann, Stephan;
- Hall, Laurence;
- Riley, Sean;
- Sørensen, Jesper;
- Amaro, Rommie E.;
- Schnaufer, Achim
- Article
30
- Chemical Biology & Drug Design, 2009, v. 73, n. 2, p. 168, doi. 10.1111/j.1747-0285.2008.00761.x
- Durrant, Jacob D.;
- Amaro, Rommie E.;
- McCammon, J. Andrew
- Article
31
- Chemical Biology & Drug Design, 2008, v. 71, n. 2, p. 106, doi. 10.1111/j.1747-0285.2007.00614.x
- Landon, Melissa R.;
- Amaro, Rommie E.;
- Baron, Riccardo;
- Chi Ho Ngan;
- Ozonoff, David;
- Andrew McCammon, J.;
- Vajda, Sandor
- Article
32
- PLoS Computational Biology, 2019, v. 15, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006856
- Yang, Pei-Chi;
- Purawat, Shweta;
- Ieong, Pek U.;
- Jeng, Mao-Tsuen;
- DeMarco, Kevin R.;
- Vorobyov, Igor;
- McCulloch, Andrew D.;
- Altinas, Ilkay;
- Amaro, Rommie E.;
- Clancy, Colleen E.
- Article
33
- Journal of Computer-Aided Molecular Design, 2022, v. 36, n. 2, p. 87, doi. 10.1007/s10822-021-00433-2
- Gan, Jessie Low;
- Kumar, Dhruv;
- Chen, Cynthia;
- Taylor, Bryn C.;
- Jagger, Benjamin R.;
- Amaro, Rommie E.;
- Lee, Christopher T.
- Article
34
- 2020
- Gilson, Michael K.;
- Amaro, Rommie E.
- Editorial
35
- Journal of Computer-Aided Molecular Design, 2020, v. 34, n. 2, p. 99, doi. 10.1007/s10822-020-00289-y
- Parks, Conor D.;
- Gaieb, Zied;
- Chiu, Michael;
- Yang, Huanwang;
- Shao, Chenghua;
- Walters, W. Patrick;
- Jansen, Johanna M.;
- McGaughey, Georgia;
- Lewis, Richard A.;
- Bembenek, Scott D.;
- Ameriks, Michael K.;
- Mirzadegan, Tara;
- Burley, Stephen K.;
- Amaro, Rommie E.;
- Gilson, Michael K.
- Article
36
- FASEB Bioadvances, 2020, v. 2, n. 1, p. 49, doi. 10.1096/fba.2019-00068
- Shi, Ke;
- Demir, Özlem;
- Carpenter, Michael A.;
- Banerjee, Surajit;
- Harki, Daniel A.;
- Amaro, Rommie E.;
- Harris, Reuben S.;
- Aihara, Hideki
- Article
37
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-020-18911-w
- Klima, Jason C.;
- Doyle, Lindsey A.;
- Lee, Justin Daho;
- Rappleye, Michael;
- Gagnon, Lauren A.;
- Lee, Min Yen;
- Barros, Emilia P.;
- Vorobieva, Anastassia A.;
- Dou, Jiayi;
- Bremner, Samantha;
- Quon, Jacob S.;
- Chow, Cameron M.;
- Carter, Lauren;
- Mack, David L.;
- Amaro, Rommie E.;
- Vaughan, Joshua C.;
- Berndt, Andre;
- Stoddard, Barry L.;
- Baker, David
- Article
38
- PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0068934
- Feher, Victoria A.;
- Randall, Arlo;
- Baldi, Pierre;
- Bush, Robin M.;
- de la Maza, Luis M.;
- Amaro, Rommie E.
- Article
39
- PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0032217
- Gabrielsen, Mads;
- Beckham, Katherine S. H.;
- Feher, Victoria A.;
- Zetterström, Caroline E.;
- Wang, Dai;
- Müller, Sylke;
- Elofsson, Mikael;
- Amaro, Rommie E.;
- Byron, Olwyn;
- Roe, Andrew J.
- Article
40
- PLoS ONE, 2011, v. 6, n. 9, p. 1, doi. 10.1371/journal.pone.0025084
- Torres, Rodrigo;
- Swift, Robert V.;
- Chim, Nicholas;
- Wheatley, Nicole;
- Lan, Benson;
- Atwood, Brian R.;
- Pujol, Céline;
- Sankaran, Banu;
- Bliska, James B.;
- Amaro, Rommie E.;
- Goulding, Celia W.
- Article
41
- PLoS Computational Biology, 2020, v. 16, n. 4, p. 1, doi. 10.1371/journal.pcbi.1007756
- Lee, Christopher T.;
- Laughlin, Justin G.;
- Angliviel de La Beaumelle, Nils;
- Amaro, Rommie E.;
- McCammon, J. Andrew;
- Ramamoorthi, Ravi;
- Holst, Michael;
- Rangamani, Padmini
- Article
42
- Evolutionary Bioinformatics, 2019, v. 15, p. N.PAG, doi. 10.1177/1176934319876938
- Le, Khanh PB;
- Do, Phuc-Chau;
- Amaro, Rommie E;
- Le, Ly
- Article
43
- Evolutionary Bioinformatics, 2019, v. 15, p. N.PAG, doi. 10.1177/1176934319876938
- Le, Khanh PB;
- Do, Phuc-Chau;
- Amaro, Rommie E;
- Le, Ly
- Article
44
- Evolutionary Bioinformatics, 2019, p. 1, doi. 10.1177/1176934319876938
- Le, Khanh PB;
- Do, Phuc-Chau;
- Amaro, Rommie E;
- Le, Ly
- Article
45
- Scientific Reports, 2016, p. 27806, doi. 10.1038/srep27806
- Goldgof, Gregory M.;
- Durrant, Jacob D.;
- Ottilie, Sabine;
- Vigil, Edgar;
- Allen, Kenneth E.;
- Gunawan, Felicia;
- Kostylev, Maxim;
- Henderson, Kiersten A.;
- Yang, Jennifer;
- Schenken, Jake;
- LaMonte, Gregory M.;
- Manary, Micah J.;
- Murao, Ayako;
- Nachon, Marie;
- Stanhope, Rebecca;
- Prescott, Maximo;
- McNamara, Case W.;
- Slayman, Carolyn W.;
- Amaro, Rommie E.;
- Suzuki, Yo
- Article
46
- Scientific Reports, 2016, v. 6, n. 1, p. 1, doi. 10.1038/srep27806
- Goldgof, Gregory M.;
- Durrant, Jacob D.;
- Ottilie, Sabine;
- Vigil, Edgar;
- Allen, Kenneth E.;
- Gunawan, Felicia;
- Kostylev, Maxim;
- Henderson, Kiersten A.;
- Yang, Jennifer;
- Schenken, Jake;
- LaMonte, Gregory M.;
- Manary, Micah J.;
- Murao, Ayako;
- Nachon, Marie;
- Murray, Rebecca;
- Prescott, Maximo;
- McNamara, Case W.;
- Slayman, Carolyn W.;
- Amaro, Rommie E.;
- Suzuki, Yo
- Article
47
- Chemical Biology & Drug Design, 2017, v. 89, n. 5, p. 762, doi. 10.1111/cbdd.12900
- Akbar, Rahmad;
- Jusoh, Siti Azma;
- Amaro, Rommie E.;
- Helms, Volkhard
- Article
48
- Chemical Biology & Drug Design, 2015, v. 85, n. 1, p. 14, doi. 10.1111/cbdd.12423
- Durrant, Jacob D.;
- Amaro, Rommie E.
- Article
49
- Chemical Biology & Drug Design, 2014, v. 84, n. 2, p. 131, doi. 10.1111/cbdd.12302
- Demir, Özlem;
- Labaied, Mehdi;
- Merritt, Chris;
- Stuart, Ken;
- Amaro, Rommie E.
- Article
50
- Chemical Biology & Drug Design, 2013, v. 81, n. 1, p. 61, doi. 10.1111/cbdd.12074
- Swift, Robert V.;
- Amaro, Rommie E.
- Article