Works by Allen, Alexandra M.

Results: 27

The Use and Limitations of Exome Capture to Detect Novel Variation in the Hexaploid Wheat Genome.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.841855

By:

Burridge, Amanda J.;
Winfield, Mark O.;
Wilkinson, Paul A.;
Przewieslik-Allen, Alexandra M.;
Edwards, Keith J.;
Barker, Gary L. A.

Publication type:

Article

Exploiting the genome of Thinopyrum elongatum to expand the gene pool of hexaploid wheat.

Published in:

Theoretical & Applied Genetics, 2020, v. 133, n. 7, p. 2213, doi. 10.1007/s00122-020-03591-3

By:

Baker, Lauren;
Grewal, Surbhi;
Yang, Cai-yun;
Hubbart-Edwards, Stella;
Scholefield, Duncan;
Ashling, Stephen;
Burridge, Amanda J.;
Przewieslik-Allen, Alexandra M.;
Wilkinson, Paul A.;
King, Ian P.;
King, Julie

Publication type:

Article

Conversion of array‐based single nucleotide polymorphic markers for use in targeted genotyping by sequencing in hexaploid wheat (<italic>Triticum aestivum</italic>).

Published in:

Plant Biotechnology Journal, 2018, v. 16, n. 4, p. 867, doi. 10.1111/pbi.12834

By:

Burridge, Amanda J.;
Wilkinson, Paul A.;
Winfield, Mark O.;
Barker, Gary L. A.;
Allen, Alexandra M.;
Coghill, Jane A.;
Waterfall, Christy;
Edwards, Keith J.

Publication type:

Article

High‐density genotyping of the A.E. Watkins Collection of hexaploid landraces identifies a large molecular diversity compared to elite bread wheat.

Published in:

Plant Biotechnology Journal, 2018, v. 16, n. 1, p. 165, doi. 10.1111/pbi.12757

By:

Winfield, Mark O.;
Allen, Alexandra M.;
Wilkinson, Paul A.;
Burridge, Amanda J.;
Barker, Gary L. A.;
Coghill, Jane;
Waterfall, Christy;
Wingen, Luzie U.;
Griffiths, Simon;
Edwards, Keith J.

Publication type:

Article

Characterization of a Wheat Breeders' Array suitable for high-throughput SNP genotyping of global accessions of hexaploid bread wheat ( Triticum aestivum).

Published in:

Plant Biotechnology Journal, 2017, v. 15, n. 3, p. 390, doi. 10.1111/pbi.12635

By:

Allen, Alexandra M.;
Winfield, Mark O.;
Burridge, Amanda J.;
Downie, Rowena C.;
Benbow, Harriet R.;
Barker, Gary L. A.;
Wilkinson, Paul A.;
Coghill, Jane;
Waterfall, Christy;
Davassi, Alessandro;
Scopes, Geoff;
Pirani, Ali;
Webster, Teresa;
Brew, Fiona;
Bloor, Claire;
Griffiths, Simon;
Bentley, Alison R.;
Alda, Mark;
Jack, Peter;
Phillips, Andrew L.

Publication type:

Article

A step change in the transfer of interspecific variation into wheat from Amblyopyrum muticum.

Published in:

Plant Biotechnology Journal, 2017, v. 15, n. 2, p. 217, doi. 10.1111/pbi.12606

By:

King, Julie;
Grewal, Surbhi;
Yang, Cai‐yun;
Hubbart, Stella;
Scholefield, Duncan;
Ashling, Stephen;
Edwards, Keith J.;
Allen, Alexandra M.;
Burridge, Amanda;
Bloor, Claire;
Davassi, Alessandro;
Silva, Glacy J.;
Chalmers, Ken;
King, Ian P.

Publication type:

Article

High-density SNP genotyping array for hexaploid wheat and its secondary and tertiary gene pool.

Published in:

Plant Biotechnology Journal, 2016, v. 14, n. 5, p. 1195, doi. 10.1111/pbi.12485

By:

Winfield, Mark O.;
Allen, Alexandra M.;
Burridge, Amanda J.;
Barker, Gary L. A.;
Benbow, Harriet R.;
Wilkinson, Paul A.;
Coghill, Jane;
Waterfall, Christy;
Davassi, Alessandro;
Scopes, Geoff;
Pirani, Ali;
Webster, Teresa;
Brew, Fiona;
Bloor, Claire;
King, Julie;
West, Claire;
Griffiths, Simon;
King, Ian;
Bentley, Alison R.;
Edwards, Keith J.

Publication type:

Article

Discovery and development of exome-based, co-dominant single nucleotide polymorphism markers in hexaploid wheat ( Triticum aestivum L.).

Published in:

Plant Biotechnology Journal, 2013, v. 11, n. 3, p. 279, doi. 10.1111/pbi.12009

By:

Allen, Alexandra M.;
Barker, Gary L. A.;
Wilkinson, Paul;
Burridge, Amanda;
Winfield, Mark;
Coghill, Jane;
Uauy, Cristobal;
Griffiths, Simon;
Jack, Peter;
Berry, Simon;
Werner, Peter;
Melichar, James P. E.;
McDougall, Jane;
Gwilliam, Rhian;
Robinson, Phil;
Edwards, Keith J.

Publication type:

Article

Targeted re-sequencing of the allohexaploid wheat exome.

Published in:

Plant Biotechnology Journal, 2012, v. 10, n. 6, p. 733, doi. 10.1111/j.1467-7652.2012.00713.x

By:

Winfield, Mark O.;
Wilkinson, Paul A.;
Allen, Alexandra M.;
Barker, Gary L. A.;
Coghill, Jane A.;
Burridge, Amanda;
Hall, Anthony;
Brenchley, Rachael C.;
D'Amore, Rosalinda;
Hall, Neil;
Bevan, Michael W.;
Richmond, Todd;
Gerhardt, Daniel J.;
Jeddeloh, Jeffrey A.;
Edwards, Keith J.

Publication type:

Article

Transcript-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat ( Triticum aestivum L.).

Published in:

Plant Biotechnology Journal, 2011, v. 9, n. 9, p. 1086, doi. 10.1111/j.1467-7652.2011.00628.x

By:

Allen, Alexandra M.;
Barker, Gary L.A.;
Berry, Simon T.;
Coghill, Jane A.;
Gwilliam, Rhian;
Kirby, Susan;
Robinson, Phil;
Brenchley, Rachel C.;
D'Amore, Rosalinda;
McKenzie, Neil;
Waite, Darren;
Hall, Anthony;
Bevan, Michael;
Hall, Neil;
Edwards, Keith J.

Publication type:

Article

Introgression of Aegilops speltoides segments in Triticum aestivum and the effect of the gametocidal genes.

Published in:

Annals of Botany, 2018, v. 121, n. 2, p. 229, doi. 10.1093/aob/mcx149

By:

King, Julie;
Grewal, Surbhi;
Yang, Cai-yun;
Edwards, Stella Hubbart;
Scholefield, Duncan;
Ashling, Stephen;
Harper, John A;
Allen, Alexandra M;
Edwards, Keith J;
Burridge, Amanda J

Publication type:

Article

Quantifying rooting at depth in a wheat doubled haploid population with introgression from wild emmer.

Published in:

Annals of Botany, 2017, v. 120, n. 3, p. 457, doi. 10.1093/aob/mcx068

By:

Clarke, Christina K.;
Gregory, Peter J.;
Lukac, Martin;
Burridge, Amanda J.;
Allen, Alexandra M.;
Edwards, Keith J.;
Gooding, Mike J.

Publication type:

Article

Pollen–pistil interactions and self-incompatibility in the Asteraceae: new insights from studies of Senecio squalidus (Oxford ragwort).

Published in:

Annals of Botany, 2011, v. 108, n. 4, p. 687, doi. 10.1093/aob/mcr147

By:

Allen, Alexandra M.;
Thorogood, Christopher J.;
Hegarty, Matthew J.;
Lexer, Christian;
Hiscock, Simon J.

Publication type:

Article

Developing a High-Throughput SNP-Based Marker System to Facilitate the Introgression of Traits From Aegilops Species Into Bread Wheat (Triticum aestivum).

Published in:

Frontiers in Plant Science, 2019, p. N.PAG, doi. 10.3389/fpls.2018.01993

By:

Przewieslik-Allen, Alexandra M.;
Burridge, Amanda J.;
Wilkinson, Paul A.;
Winfield, Mark O.;
Shaw, Daniel S.;
McAusland, Lorna;
King, Julie;
King, Ian P.;
Edwards, Keith J.;
Barker, Gary L. A.

Publication type:

Article

Stability of wheat grain yields over three field seasons in the UK.

Published in:

Food & Energy Security, 2019, v. 8, n. 2, p. N.PAG, doi. 10.1002/fes3.147

By:

Pennacchi, João Paulo;
Carmo‐Silva, Elizabete;
Andralojc, P. John;
Lawson, Tracy;
Allen, Alexandra M.;
Raines, Christine A.;
Parry, Martin A. J.

Publication type:

Article

Characterisation of sunflower- 21 ( SF21) genes expressed in pollen and pistil of Senecio squalidus (Asteraceae) and their relationship with other members of the SF21 gene family.

Published in:

Sexual Plant Reproduction, 2010, v. 23, n. 3, p. 173, doi. 10.1007/s00497-010-0137-9

By:

Allen, Alexandra M.;
Lexer, Christian;
Hiscock, Simon J.

Publication type:

Article

CerealsDB 3.0: expansion of resources and data integration.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-1139-x

By:

Wilkinson, Paul A.;
Winfield, Mark O.;
Barker, Gary L. A.;
Tyrrell, Simon;
Xingdong Bian;
Allen, Alexandra M.;
Burridge, Amanda;
Coghill, Jane A.;
Waterfall, Christy;
Caccamo, Mario;
Davey, Robert P.;
Edwards, Keith J.

Publication type:

Article

Wheat Landrace Genome Diversity.

Published in:

Genetics, 2017, v. 205, n. 4, p. 1657, doi. 10.1534/genetics.116.194688

By:

Wingen, Luzie U.;
West, Claire;
Leverington-Waite, Michelle;
Collier, Sarah;
Orford, Simon;
Goram, Richard;
Cai-Yun Yang;
King, Julie;
Allen, Alexandra M.;
Burridge, Amanda;
Edwards, Keith J.;
Griffiths, Simon

Publication type:

Article

Interactions between two QTLs for time to anthesis on spike development and fertility in wheat.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-81857-6

By:

Basavaraddi, Priyanka A.;
Savin, Roxana;
Wingen, Luzie U.;
Bencivenga, Stefano;
Przewieslik-Allen, Alexandra M.;
Griffiths, Simon;
Slafer, Gustavo A.

Publication type:

Article

Diverse cell signalling pathways regulate pollen-stigma interactions: the search for consensus.

Published in:

New Phytologist, 2008, v. 179, n. 2, p. 286, doi. 10.1111/j.1469-8137.2008.02457.x

By:

Hiscock, Simon J.;
Allen, Alexandra M.

Publication type:

Article

CerealsDB—new tools for the analysis of the wheat genome: update 2020.

Published in:

Database: The Journal of Biological Databases & Curation, 2020, v. 2020, p. 1, doi. 10.1093/database/baaa060

By:

Wilkinson, Paul A;
Allen, Alexandra M;
Tyrrell, Simon;
Wingen, Luzie U;
Bian, Xingdong;
Winfield, Mark O;
Burridge, Amanda;
Shaw, Daniel S;
Zaucha, Jan;
Griffiths, Simon;
Davey, Robert P;
Edwards, Keith J;
Barker, Gary L A

Publication type:

Article

A wheat chromosome segment substitution line series supports characterization and use of progenitor genetic variation.

Published in:

Plant Genome, 2024, v. 17, n. 1, p. 1, doi. 10.1002/tpg2.20288

By:

Horsnell, Richard;
Leigh, Fiona J.;
Wright, Tally I. C.;
Burridge, Amanda J.;
Ligeza, Aleksander;
Przewieslik‐Allen, Alexandra M.;
Howell, Philip;
Uauy, Cristobal;
Edwards, Keith J.;
Bentley, Alison R.

Publication type:

Article

Segregation distortion: Utilizing simulated genotyping data to evaluate statistical methods.

Published in:

PLoS ONE, 2020, v. 15, n. 2, p. 1, doi. 10.1371/journal.pone.0228951

By:

Coulton, Alexander;
Przewieslik-Allen, Alexandra M.;
Burridge, Amanda J.;
Shaw, Daniel S.;
Edwards, Keith J.;
Barker, Gary L. A.

Publication type:

Article

CerealsDB 2.0: an integrated resource for plant breeders and scientists.

Published in:

BMC Bioinformatics, 2012, v. 13, n. 1, p. 19, doi. 10.1186/1471-2105-13-219

By:

Wilkinson, Paul A;
Winfried, Mark O;
Barker, Gary LA;
Allen, Alexandra M;
Burridge, Amanda;
Coghill, Jane A;
Edwards, Keith

Publication type:

Article

Analysis of the bread wheat genome using whole-genome shotgun sequencing.

Published in:

Nature, 2012, v. 491, n. 7426, p. 705, doi. 10.1038/nature11650

By:

Brenchley, Rachel;
Spannagl, Manuel;
Pfeifer, Matthias;
Barker, Gary L. A.;
D'Amore, Rosalinda;
Allen, Alexandra M.;
McKenzie, Neil;
Kramer, Melissa;
Kerhornou, Arnaud;
Bolser, Dan;
Kay, Suzanne;
Waite, Darren;
Trick, Martin;
Bancroft, Ian;
Gu, Yong;
Huo, Naxin;
Luo, Ming-Cheng;
Sehgal, Sunish;
Gill, Bikram;
Kianian, Sharyar

Publication type:

Article

Hybridization and polyploidy as drivers of continuing evolution and speciation in Sorbus.

Published in:

Molecular Ecology, 2010, v. 19, n. 8, p. 1675, doi. 10.1111/j.1365-294X.2010.04585.x

By:

ROBERTSON, ASHLEY;
RICH, TIMOTHY C. G.;
ALLEN, ALEXANDRA M.;
HOUSTON, LIBBY;
ROBERTS, CAT;
BRIDLE, JON R.;
HARRIS, STEPHEN A.;
HISCOCK, SIMON J.

Publication type:

Article

Comparative Analysis of Pistil Transcriptomes Reveals Conserved and Novel Genes Expressed in Dry, Wet, and Semidry Stigmas.

Published in:

Plant Physiology, 2010, v. 154, n. 3, p. 1347, doi. 10.1104/pp.110.162172

By:

Allen, Alexandra M.;
Lexer, Christian;
Hiscock, Simon J.

Publication type:

Article